Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c16
         (397 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL136980-2|CAI95004.1|  791|Homo sapiens KIAA1432 protein.             29   4.2  
AL136980-1|CAI95003.1| 1085|Homo sapiens KIAA1432 protein.             29   4.2  
AK074150-1|BAB84976.1|  768|Homo sapiens FLJ00223 protein protein.     29   4.2  
AK022642-1|BAB14150.1|  628|Homo sapiens protein ( Homo sapiens ...    29   4.2  
AB205401-1|BAE16982.1| 1344|Homo sapiens connexin43-interacting ...    29   4.2  
AB037853-1|BAA92670.2|  796|Homo sapiens KIAA1432 protein protein.     29   4.2  
U68723-1|AAB58252.1|  490|Homo sapiens checkpoint suppressor 1 p...    28   9.7  
BC007506-1|AAH07506.1|  468|Homo sapiens checkpoint suppressor 1...    28   9.7  

>AL136980-2|CAI95004.1|  791|Homo sapiens KIAA1432 protein.
          Length = 791

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 354 KTIFTFSLLKQTLKYYINPPLHNFL*RTF*-QKLLFSSCFGCLYLWPHILEVLVKVISE 181
           + +F F ++++T + Y++  L   L R    Q LL +     L  +PH+LE+++  + E
Sbjct: 180 EVLFPFCVVERTSQIYLHHILRQLLVRNLGEQALLLAQSCATLPYFPHVLELMLHEVLE 238


>AL136980-1|CAI95003.1| 1085|Homo sapiens KIAA1432 protein.
          Length = 1085

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 354 KTIFTFSLLKQTLKYYINPPLHNFL*RTF*-QKLLFSSCFGCLYLWPHILEVLVKVISE 181
           + +F F ++++T + Y++  L   L R    Q LL +     L  +PH+LE+++  + E
Sbjct: 732 EVLFPFCVVERTSQIYLHHILRQLLVRNLGEQALLLAQSCATLPYFPHVLELMLHEVLE 790


>AK074150-1|BAB84976.1|  768|Homo sapiens FLJ00223 protein protein.
          Length = 768

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 354 KTIFTFSLLKQTLKYYINPPLHNFL*RTF*-QKLLFSSCFGCLYLWPHILEVLVKVISE 181
           + +F F ++++T + Y++  L   L R    Q LL +     L  +PH+LE+++  + E
Sbjct: 157 EVLFPFCVVERTSQIYLHHILRQLLVRNLGEQALLLAQSCATLPYFPHVLELMLHEVLE 215


>AK022642-1|BAB14150.1|  628|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12580 fis, clone NT2RM4001116, weakly similar to
           HYPOTHETICAL 216.3 KD PROTEIN R06F6.8 IN CHROMOSOME II.
           ).
          Length = 628

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 354 KTIFTFSLLKQTLKYYINPPLHNFL*RTF*-QKLLFSSCFGCLYLWPHILEVLVKVISE 181
           + +F F ++++T + Y++  L   L R    Q LL +     L  +PH+LE+++  + E
Sbjct: 275 EVLFPFCVVERTSQIYLHHILRQLLVRNLGEQALLLAQSCATLPYFPHVLELMLHEVLE 333


>AB205401-1|BAE16982.1| 1344|Homo sapiens connexin43-interacting
           protein of 150 kDa protein.
          Length = 1344

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 354 KTIFTFSLLKQTLKYYINPPLHNFL*RTF*-QKLLFSSCFGCLYLWPHILEVLVKVISE 181
           + +F F ++++T + Y++  L   L R    Q LL +     L  +PH+LE+++  + E
Sbjct: 733 EVLFPFCVVERTSQIYLHHILRQLLVRNLGEQALLLAQSCATLPYFPHVLELMLHEVLE 791


>AB037853-1|BAA92670.2|  796|Homo sapiens KIAA1432 protein protein.
          Length = 796

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 354 KTIFTFSLLKQTLKYYINPPLHNFL*RTF*-QKLLFSSCFGCLYLWPHILEVLVKVISE 181
           + +F F ++++T + Y++  L   L R    Q LL +     L  +PH+LE+++  + E
Sbjct: 185 EVLFPFCVVERTSQIYLHHILRQLLVRNLGEQALLLAQSCATLPYFPHVLELMLHEVLE 243


>U68723-1|AAB58252.1|  490|Homo sapiens checkpoint suppressor 1
           protein.
          Length = 490

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 179 RTVPYNVNPMQTNTPPLCSLSYKALRDP 96
           +  PY+ +P   NTPP C  +Y++   P
Sbjct: 204 KKTPYHPHPHVFNTPPTCPQAYQSTSGP 231


>BC007506-1|AAH07506.1|  468|Homo sapiens checkpoint suppressor 1
           protein.
          Length = 468

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 179 RTVPYNVNPMQTNTPPLCSLSYKALRDP 96
           +  PY+ +P   NTPP C  +Y++   P
Sbjct: 204 KKTPYHPHPHVFNTPPTCPQAYQSTSGP 231


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,295,028
Number of Sequences: 237096
Number of extensions: 1081806
Number of successful extensions: 1840
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1840
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)