Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c16
         (397 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023692-1|AAY85092.1|   85|Drosophila melanogaster IP03739p pro...    62   3e-10
AE014298-355|AAF45745.1|   70|Drosophila melanogaster CG17776-PA...    61   5e-10

>BT023692-1|AAY85092.1|   85|Drosophila melanogaster IP03739p
           protein.
          Length = 85

 Score = 61.7 bits (143), Expect = 3e-10
 Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +1

Query: 76  FSTM-KKYGSRNALYDKLHKGGVLVCIGLTLYGTVLLTDHFYKYFKYVRPQIQASKAAAE 252
           F+ M KK  + N L DKLH+G V  CIG+TLYGT +L   +Y Y   +RP+    K  AE
Sbjct: 13  FAAMQKKPINTNTLLDKLHRGAVYACIGVTLYGTYILGMRYYHYCTVIRPE----KQQAE 68

Query: 253 QELLSEGSSEK 285
            +LL EG+ +K
Sbjct: 69  LKLLDEGAHDK 79


>AE014298-355|AAF45745.1|   70|Drosophila melanogaster CG17776-PA
           protein.
          Length = 70

 Score = 61.3 bits (142), Expect = 5e-10
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = +1

Query: 88  KKYGSRNALYDKLHKGGVLVCIGLTLYGTVLLTDHFYKYFKYVRPQIQASKAAAEQELLS 267
           KK  + N L DKLH+G V  CIG+TLYGT +L   +Y Y   +RP+    K  AE +LL 
Sbjct: 3   KKPINTNTLLDKLHRGAVYACIGVTLYGTYILGMRYYHYCTVIRPE----KQQAELKLLD 58

Query: 268 EGSSEK 285
           EG+ +K
Sbjct: 59  EGAHDK 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,966,829
Number of Sequences: 53049
Number of extensions: 335259
Number of successful extensions: 830
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)