Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c15
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.23 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   0.92 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   0.92 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    26   0.92 
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    25   2.8  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    25   2.8  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   4.9  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   8.6  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 605 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQR 501
           +QR+Q+ P +  ++ P + RP  ++ PQQ    QR
Sbjct: 458 QQRQQQQPQQQQQQRPQQQRPQ-QQRPQQQRSQQR 491



 Score = 26.6 bits (56), Expect = 0.70
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = -2

Query: 605 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 465
           RQ++QR      ++   + +   ++  QQ  + Q+  Q  HQ+Q  Q
Sbjct: 322 RQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQ 368



 Score = 24.2 bits (50), Expect = 3.7
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -2

Query: 605 RQREQRYPTEDDERDPVEARPHVREA--PQQHAELQRVHQVLHQEQSAQ 465
           RQ++Q+   +  ++      P +R+    QQH + Q+  Q   Q+Q  Q
Sbjct: 280 RQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQ 328



 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = -2

Query: 605 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 465
           RQ++QR   +  ++   + +   ++  QQ    Q+  Q   Q+Q  Q
Sbjct: 331 RQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQ 377


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 26.2 bits (55), Expect = 0.92
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 575 PRLDSAVHAAEGLRNEQGASGRQ 643
           P L+ A+   +GL+ E+GA G Q
Sbjct: 766 PNLEEAIRGPQGLQGEKGAPGIQ 788


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.2 bits (55), Expect = 0.92
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 575 PRLDSAVHAAEGLRNEQGASGRQ 643
           P L+ A+   +GL+ E+GA G Q
Sbjct: 1   PNLEEAIRGPQGLQGEKGAPGIQ 23


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 26.2 bits (55), Expect = 0.92
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 620 HFVGLRQREQRYPTEDDERDPVEARPHVREAPQQHAELQR 501
           HF G+++R  R  TE+   +  + +   R A QQ  +L +
Sbjct: 300 HFYGMQRRFNRARTEEQREERRQIKSDARAALQQAIKLSK 339


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 572 DERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 465
           D R    +R HV   P+ H    +VH    Q+ + Q
Sbjct: 33  DPRTAPHSRHHVHMMPEMHGAYSQVHHHRAQDPTPQ 68


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 572 DERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 465
           D R    +R HV   P+ H    +VH    Q+ + Q
Sbjct: 33  DPRTAPHSRHHVHMMPEMHGAYSQVHHHRAQDPTPQ 68


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/47 (23%), Positives = 23/47 (48%)
 Frame = -2

Query: 605 RQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 465
           R+ +Q+   +  ++   + +  V++  QQH   Q+  Q   Q+Q  Q
Sbjct: 258 REWQQQQQQQQHQQREQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQ 304


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 542 HVREAPQQHAELQRVHQVLHQEQSAQLI 459
           H    PQQ+ + Q+ HQ+ H     Q++
Sbjct: 146 HRHHLPQQYQQQQQQHQLEHNGGREQMM 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,212
Number of Sequences: 2352
Number of extensions: 7464
Number of successful extensions: 37
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)