Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19c15
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical pr... 85 6e-17
Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical pr... 85 6e-17
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 85 6e-17
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 82 3e-16
AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical ... 30 1.3
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 30 1.7
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 30 1.7
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 30 1.7
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 30 1.7
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 30 1.7
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 30 1.7
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 30 1.7
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 30 1.7
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC024755-4|AAK84603.1| 225|Caenorhabditis elegans Hypothetical ... 29 2.9
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 29 3.9
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 28 6.8
U50193-7|AAL11479.1| 327|Caenorhabditis elegans T box family pr... 27 9.0
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 88.6 bits (210), Expect = 3e-18
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 2/181 (1%)
Frame = +3
Query: 111 TILDPH--AWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 284
+IL H AW D + + P V +IYWR+
Sbjct: 356 SILKHHGDAWIDFKTVPPCVLDVIYWRDAKKSAIVLSLALLVLFVLAKYPLLTVVTYSLL 415
Query: 285 XXXXXXXXFRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYE 464
FR++K V ++KT+ HPF +L ++++ +
Sbjct: 416 LALGAAAGFRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANK 475
Query: 465 LRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDAN 644
L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D +
Sbjct: 476 LKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPH 535
Query: 645 L 647
L
Sbjct: 536 L 536
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 88.6 bits (210), Expect = 3e-18
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 2/181 (1%)
Frame = +3
Query: 111 TILDPH--AWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 284
+IL H AW D + + P V +IYWR+
Sbjct: 2270 SILKHHGDAWIDFKTVPPCVLDVIYWRDAKKSAIVLSLALLVLFVLAKYPLLTVVTYSLL 2329
Query: 285 XXXXXXXXFRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYE 464
FR++K V ++KT+ HPF +L ++++ +
Sbjct: 2330 LALGAAAGFRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANK 2389
Query: 465 LRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDAN 644
L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D +
Sbjct: 2390 LKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPH 2449
Query: 645 L 647
L
Sbjct: 2450 L 2450
>Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical
protein W06A7.3e protein.
Length = 204
Score = 84.6 bits (200), Expect = 6e-17
Identities = 38/113 (33%), Positives = 66/113 (58%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 58 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 117
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANL 647
++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D +L
Sbjct: 118 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 170
>Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical
protein W06A7.3b protein.
Length = 222
Score = 84.6 bits (200), Expect = 6e-17
Identities = 38/113 (33%), Positives = 66/113 (58%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 76 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 135
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANL 647
++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D +L
Sbjct: 136 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 188
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 84.6 bits (200), Expect = 6e-17
Identities = 38/113 (33%), Positives = 66/113 (58%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
FR++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 2461 FRVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2520
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANL 647
++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D +L
Sbjct: 2521 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 2573
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 82.2 bits (194), Expect = 3e-16
Identities = 37/113 (32%), Positives = 65/113 (57%)
Frame = +3
Query: 309 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSVSXXXXXXXXXXXXXXXXXXXYELRRLFLVE 488
F ++K V ++KT+ HPF +L ++++ +L++L VE
Sbjct: 2342 FSVFKKVEAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVE 2401
Query: 489 DLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANL 647
++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D +L
Sbjct: 2402 SPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHL 2454
>AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical
protein Y53H1A.5 protein.
Length = 281
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -2
Query: 608 LRQREQRYPTEDDERDPVEARPHVREAPQQHAELQR 501
+++RE R ED R P+E + ++ E+ +QHA +R
Sbjct: 160 IKRREMRQKMEDSGRLPLERQKYMHESRRQHALKRR 195
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 52 SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 171
SHSH+ S P Y+ S P S+HS TP+ S+
Sbjct: 181 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 220
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 52 SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 171
SHSH+ S P Y+ S P S+HS TP+ S+
Sbjct: 1821 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 1860
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 52 SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 171
SHSH+ S P Y+ S P S+HS TP+ S+
Sbjct: 1922 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 1961
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 85 CPSQHPRYAPSSTPMPGSTHSDCTP 159
CP + P+ A S+ PGSTH + +P
Sbjct: 188 CPPKVPKSASSNCVFPGSTHDESSP 212
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 85 CPSQHPRYAPSSTPMPGSTHSDCTP 159
CP + P+ A S+ PGSTH + +P
Sbjct: 292 CPPKVPKSASSNCVFPGSTHDESSP 316
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 85 CPSQHPRYAPSSTPMPGSTHSDCTP 159
CP + P+ A S+ PGSTH + +P
Sbjct: 343 CPPKVPKSASSNCVFPGSTHDESSP 367
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 85 CPSQHPRYAPSSTPMPGSTHSDCTP 159
CP + P+ A S+ PGSTH + +P
Sbjct: 343 CPPKVPKSASSNCVFPGSTHDESSP 367
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 52 SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 171
SHSH+ S P Y+ S P S+HS TP+ S+
Sbjct: 1922 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 1961
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 593 QRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQ 480
Q+Y ++ PV+ RP V++ Q H E Q+ ++L Q
Sbjct: 267 QQYKPPPQQQPPVQMRPPVQQPQQNHQEEQQNAELLMQ 304
>AC024755-4|AAK84603.1| 225|Caenorhabditis elegans Hypothetical
protein Y34B4A.9 protein.
Length = 225
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 102 SLCTILDPHAWFDPQRLHPEVES 170
++ +I DP WFDP+ EVE+
Sbjct: 40 AVLSISDPQPWFDPENFRKEVET 62
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 608 LRQREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQ 492
+R+ + PT D+E P+E+RP R ++ LQRV +
Sbjct: 540 MRRLDSDRPT-DEEIPPIESRPQTRREIERDRLLQRVRE 577
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 643 LASTCALFIS*AFGSVNSAIQP--RMMSVIPLKHAPTYVRHHSSTPN 509
LA+ A+ S A+ VN A+ ++ PLK PT+ + SSTP+
Sbjct: 898 LATPEAVDFSPAYSLVNDAVHTVIQVNGSTPLKSPPTFHSYESSTPD 944
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 643 LASTCALFIS*AFGSVNSAIQP--RMMSVIPLKHAPTYVRHHSSTPN 509
LA+ A+ S A+ VN A+ ++ PLK PT+ + SSTP+
Sbjct: 898 LATPEAVDFSPAYSLVNDAVHTVIQVNGSTPLKSPPTFHSYESSTPD 944
>U50193-7|AAL11479.1| 327|Caenorhabditis elegans T box family
protein 7 protein.
Length = 327
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 92 VSTLAMHHPRPPCLVRPTATAPRSG 166
V+ + HHP P C V P +PRSG
Sbjct: 125 VAGVGEHHPLPTCFVHP--QSPRSG 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,350,699
Number of Sequences: 27780
Number of extensions: 158921
Number of successful extensions: 908
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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