Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c14
         (666 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6RKJ8 Cluster: Polyketide synthase; n=2; Botryotinia f...    33   6.2  
UniRef50_UPI0000F21AE4 Cluster: PREDICTED: hypothetical protein;...    33   8.2  
UniRef50_Q8F462 Cluster: TldD protein; n=4; Leptospira|Rep: TldD...    33   8.2  
UniRef50_A5ES92 Cluster: Putative uncharacterized protein; n=1; ...    33   8.2  

>UniRef50_Q6RKJ8 Cluster: Polyketide synthase; n=2; Botryotinia
            fuckeliana|Rep: Polyketide synthase - Botrytis cinerea
            (Noble rot fungus) (Botryotinia fuckeliana)
          Length = 2287

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -3

Query: 514  RFSKFCRPLKLHCVVPGCLISMI---QVSKDSPCQDASIGVPHACPGV 380
            RF +  R LKLH  VPG L SMI     SK++P +D  + +     GV
Sbjct: 1832 RFQQSQRALKLHVEVPGLLDSMIFQDDKSKETPLEDDKVEIEVKACGV 1879


>UniRef50_UPI0000F21AE4 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 945

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -1

Query: 432 IRLVKTLLLVCHTPVQVSWESISVARGFQKFRITLAVFHRKNP 304
           I+  K+L ++CH PV   W S +V +   K +I + + H+ NP
Sbjct: 331 IKQSKSLFIMCHIPV-FCWISATVLQNVLKEKINIELEHKTNP 372


>UniRef50_Q8F462 Cluster: TldD protein; n=4; Leptospira|Rep: TldD
           protein - Leptospira interrogans
          Length = 472

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -2

Query: 560 KKGGLSIYFSWKMTPKIFKILST-FKASLCCPGLSDLDDPGVKRFALSRRFYWCATRLSR 384
           K G   I  S +++P+IF + S+ F A     GLS LD     + A      +C   +S 
Sbjct: 252 KSGSYPILLSNRISPQIFGMFSSPFSADSVQKGLSRLDGKVGSQIASQNWNVFCDPHISD 311

Query: 383 CPGSR 369
            PGSR
Sbjct: 312 YPGSR 316


>UniRef50_A5ES92 Cluster: Putative uncharacterized protein; n=1;
           Bradyrhizobium sp. BTAi1|Rep: Putative uncharacterized
           protein - Bradyrhizobium sp. (strain BTAi1 / ATCC
           BAA-1182)
          Length = 2039

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
 Frame = +1

Query: 217 YADKTR-STTPHFFGV*IIVSSSPTFWT-----IPRIFPVENSQCNPEFLKTTCYRDRLP 378
           + D T   TT HF  V ++ + +P         +P+I   +N+   P  + T+    R+P
Sbjct: 312 FTDNTNPKTTTHFTDVGVLEALTPLTLANGTSAVPKILVTDNTSSTPTTITTSAPPFRIP 371

Query: 379 GHLDRRVAHQ*KRLDKANLLTPGSSRSDNPGQHSEALKVDKIL 507
           G L+ RV      LD    +T     ++  GQ   +  +D +L
Sbjct: 372 GQLEVRV------LDVTGGVTTAFGVNERVGQTGNSTDLDTVL 408


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,222,975
Number of Sequences: 1657284
Number of extensions: 13819547
Number of successful extensions: 29433
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29429
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)