Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19c14
(666 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 25 0.56
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 25 0.74
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 24 1.3
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 24 1.3
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 24 1.3
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 1.7
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 23 1.7
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 23 1.7
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 23 2.2
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 23 2.2
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 23 3.0
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 3.9
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 22 3.9
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 22 3.9
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 3.9
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 21 6.9
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 21 6.9
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 21 6.9
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 21 6.9
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 6.9
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 21 6.9
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 9.1
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 9.1
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 21 9.1
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 9.1
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 9.1
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 21 9.1
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 25.0 bits (52), Expect = 0.56
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 103 VSKYASQ*EEHNRENRLEISESERKLWFKN 192
VSKY + + L +SE + K+WF+N
Sbjct: 178 VSKYITIKRKSELAENLGLSERQIKIWFQN 207
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 24.6 bits (51), Expect = 0.74
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 508 SKFCRPLKLHCVVPGCLISMIQVSKDSPCQDASIGV 401
+K+C LK+H G +++ + +PC D I V
Sbjct: 296 TKYCHSLKIHLRRYGHTPNVVLDEEGNPCPDIIIDV 331
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 109 KYASQ*EEHNRENRLEISESERKLWFKN 192
KY S+ L +SE + K+WF+N
Sbjct: 111 KYLSRPRRIQIAENLNLSERQIKIWFQN 138
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 106 SKYASQ*EEHNRENRLEISESERKLWFKN 192
S+Y + + N L +SE + K+WF+N
Sbjct: 178 SRYITIRRKAELANSLGLSERQVKIWFQN 206
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 109 KYASQ*EEHNRENRLEISESERKLWFKN 192
KY S+ L +SE + K+WF+N
Sbjct: 102 KYLSRPRRIQIAENLNLSERQIKIWFQN 129
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +1
Query: 106 SKYASQ*EEHNRENRLEISESERKLWFKN 192
+KY ++ + L+++E++ K+WF+N
Sbjct: 275 NKYLTRARRIEIASALQLNETQVKIWFQN 303
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +1
Query: 106 SKYASQ*EEHNRENRLEISESERKLWFKN 192
+KY ++ + L+++E++ K+WF+N
Sbjct: 64 NKYLTRARRIEIASALQLNETQVKIWFQN 92
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +1
Query: 106 SKYASQ*EEHNRENRLEISESERKLWFKN 192
+KY ++ + L+++E++ K+WF+N
Sbjct: 64 NKYLTRARRIEIASALQLNETQVKIWFQN 92
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 106 SKYASQ*EEHNRENRLEISESERKLWFKN 192
SKY + L ++E + K+WF+N
Sbjct: 107 SKYLCRPRRIQMAQNLNLTERQIKIWFQN 135
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 106 SKYASQ*EEHNRENRLEISESERKLWFKN 192
SKY + L ++E + K+WF+N
Sbjct: 127 SKYLCRPRRIQMAQNLNLTERQIKIWFQN 155
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 22.6 bits (46), Expect = 3.0
Identities = 7/35 (20%), Positives = 20/35 (57%)
Frame = +1
Query: 88 RYKCVVSKYASQ*EEHNRENRLEISESERKLWFKN 192
+++ ++Y ++ L ++E++ K+WF+N
Sbjct: 244 KHEFAENRYLTERRRQQLSAELGLNEAQIKIWFQN 278
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.2 bits (45), Expect = 3.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 582 VYFIIKK*KRGVVDLL*LENDTKDFQNFV 496
+YF+I+ K+ + + + N+ K QNFV
Sbjct: 1522 LYFVIEHKKKTSTEWIQVSNNVKLGQNFV 1550
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 109 KYASQ*EEHNRENRLEISESERKLWFKN 192
+Y S E + L ++E + K+WF+N
Sbjct: 138 QYLSIAERAEFSSSLRLTEPQVKIWFQN 165
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 22.2 bits (45), Expect = 3.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 151 LEISESERKLWFKN 192
L +SE + K+WF+N
Sbjct: 154 LRLSEKQVKIWFQN 167
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +1
Query: 112 YASQ*EEHNRENRLEISESERKLWFKN 192
Y S+ + L ++E + K+WF+N
Sbjct: 267 YVSKQKRWELARNLNLTERQVKIWFQN 293
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 6/24 (25%)
Frame = +1
Query: 139 RENRLEISESER------KLWFKN 192
R R+EI+ES R K+WF+N
Sbjct: 210 RRRRIEIAESLRLTERQIKIWFQN 233
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 102 YTLVSSREKTIFRNFKLRSVEKTWRSRSWLP 10
+ LVS K + K+ +E WRS + P
Sbjct: 202 FLLVSDNAKNALISEKIVRLEAVWRSGVFAP 232
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/28 (25%), Positives = 17/28 (60%)
Frame = +1
Query: 109 KYASQ*EEHNRENRLEISESERKLWFKN 192
+Y S E + + + ++ ++ K+WF+N
Sbjct: 63 RYLSAPEREHLASIIRLTPTQVKIWFQN 90
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 6/24 (25%)
Frame = +1
Query: 139 RENRLEISESER------KLWFKN 192
R R+EI+ES R K+WF+N
Sbjct: 210 RRRRIEIAESLRLTERQIKIWFQN 233
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.4 bits (43), Expect = 6.9
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 327 PV*SGISENHVLPRSTPRTPGQACGTPIEAS*QGESFDTWIIEIRQ 464
P+ + I E L TPR PG A G + E + +IRQ
Sbjct: 87 PLLALIFEKCELATCTPREPGVAGGDVCSSESFNEDIAVFSKQIRQ 132
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 6/24 (25%)
Frame = +1
Query: 139 RENRLEISESER------KLWFKN 192
R R+EI+ES R K+WF+N
Sbjct: 210 RRRRIEIAESLRLTERQIKIWFQN 233
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 151 LEISESERKLWFKN 192
L +SE + K+WF+N
Sbjct: 270 LVLSERQIKIWFQN 283
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 151 LEISESERKLWFKN 192
L +SE + K+WF+N
Sbjct: 270 LVLSERQIKIWFQN 283
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -1
Query: 351 FQKFRITLAVFHRKNPGYS 295
F ++R TLA++ NP Y+
Sbjct: 653 FPRWRQTLAMWLNHNPNYA 671
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1
Query: 151 LEISESERKLWFKN 192
L+++E + K+WF+N
Sbjct: 41 LDLTERQVKVWFQN 54
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 151 LEISESERKLWFKN 192
L +SE + K+WF+N
Sbjct: 270 LVLSERQIKIWFQN 283
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1
Query: 151 LEISESERKLWFKN 192
L+++E + K+WF+N
Sbjct: 172 LDLTERQVKVWFQN 185
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,879
Number of Sequences: 336
Number of extensions: 3588
Number of successful extensions: 31
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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