Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c11
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.48 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.9  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.9  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = -3

Query: 258 ISFGNFNFKEEGPTFIRSINRTSYLAFEFSPILIHESQFYGATNHLFTFHYLFELSFYTF 79
           I++ N   +     F+R +  TSYL F++      E ++Y   +HL     +F   F   
Sbjct: 123 INYENQRTRSRIHLFVRYVFVTSYLLFDYFVQRNQEYKYYQILSHL---SGIFFTVFNVA 179

Query: 78  GCYI 67
            CY+
Sbjct: 180 QCYL 183


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 15/53 (28%), Positives = 21/53 (39%)
 Frame = +1

Query: 340 DILKDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTAR 498
           D++KD +     L+     L+ LLS G   D       K  +    L T T R
Sbjct: 80  DVIKDNYRKVTDLKKRFPKLKVLLSVGGNADVSGQDEEKNIKYRNLLETTTRR 132


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 123 LFTFHYLFELSFYTFGC 73
           +FT H LF L  Y F C
Sbjct: 274 IFTMHLLFLLCIYYFYC 290



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 123 LFTFHYLFELSFYTFGC 73
           +FT H LF L  Y F C
Sbjct: 155 IFTVHLLFLLCIYHFFC 171


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -3

Query: 213 IRSINRTSYLAFEFSPILIHESQFYGATNHLFTFHYL--FELSFYTFGCYI 67
           +RS+  T+YL F++  +L    +F    N+    HYL  F   F    CY+
Sbjct: 494 VRSVFVTTYLMFDYCTVL-RVQRF---NNYQSLAHYLRVFFTVFNVVHCYL 540


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 612 GESYSGLMFINTHVQHTLHF 553
           G+S+  L  + +H+Q T H+
Sbjct: 485 GQSFRSLAEMTSHMQQTQHY 504


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 622 NHMRRELLWPDVHQ 581
           N M+RE  WP++++
Sbjct: 150 NSMKREYYWPNMYR 163


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 147 QFYGATNHLFTFHY 106
           QFY   NH F  HY
Sbjct: 400 QFYNFLNHNFDRHY 413


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,724
Number of Sequences: 336
Number of extensions: 3736
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)