Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19c11
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 234 6e-62
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 204 7e-53
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 132 2e-31
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 123 1e-28
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 123 1e-28
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 122 2e-28
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 101 7e-22
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 101 7e-22
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 86 3e-17
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 81 6e-16
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 78 7e-15
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 77 2e-14
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 75 4e-14
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 73 3e-13
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 71 7e-13
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 64 1e-10
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 64 1e-10
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 59 4e-09
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 58 9e-09
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 56 3e-08
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 49 3e-06
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 46 4e-05
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 42 6e-04
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 37 0.017
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 34 0.091
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 31 0.64
AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical ... 29 2.6
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 29 4.5
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 29 4.5
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 29 4.5
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 29 4.5
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 29 4.5
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 29 4.5
U40060-6|AAA81144.1| 268|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 29 4.5
Z77662-11|CAI70418.1| 358|Caenorhabditis elegans Hypothetical p... 28 7.9
U55365-9|AAA98574.1| 346|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 28 7.9
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 28 7.9
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 234 bits (572), Expect = 6e-62
Identities = 108/198 (54%), Positives = 141/198 (71%)
Frame = +1
Query: 61 MANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 240
M+NIA R++RE KE++ + E+ I + ++NEN TE+KG I GP DTPY GG F L+I
Sbjct: 1 MSNIAFNRLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDI 60
Query: 241 KVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAG 420
K+P+ YPF+PP ++F TKIWHPNVSS TG ICLDILKDQWAA+LTLRTVLLS+QAL+
Sbjct: 61 KIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVLLSIQALMCTP 120
Query: 421 EPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGGPNIVHECNSKVQRMLDMGIDEHQAR 600
EP DPQDAVVAKQ+ E P +F TA +WT +A G + V ++ DMG+ E +A
Sbjct: 121 EPKDPQDAVVAKQYMEKPAVFKATAEYWTTKFAKGAVKNAGYQALVDKLKDMGVREEEAV 180
Query: 601 VALSSYDWDLERATEQLF 654
LS +WD+ R+T +F
Sbjct: 181 SVLSCNNWDINRSTVYIF 198
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 204 bits (497), Expect = 7e-53
Identities = 102/214 (47%), Positives = 141/214 (65%), Gaps = 16/214 (7%)
Frame = +1
Query: 61 MANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 240
M+N+A R+ R+ KE+ + ++ I + + N ++KG I GP TPY GGTF +++
Sbjct: 15 MSNLALARVTRKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKV 74
Query: 241 KVPETYPFNPPKI---------------RFLTKIWHPNVSSVTGAICLDILKDQWAAALT 375
+PE YPF PPK+ +F+T+IWHPN+SS TG ICLDILKD+W A+LT
Sbjct: 75 DIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLT 134
Query: 376 LRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGGPNIVH-ECNS 552
LRTVLLSLQA+L + EP+DPQDAVVAKQF N +FT TA +WT+ +A V + N
Sbjct: 135 LRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYWTSYFANSKKDVEPDFNR 194
Query: 553 KVQRMLDMGIDEHQARVALSSYDWDLERATEQLF 654
KV R+++MGI E +A V LS +W LE+A + +F
Sbjct: 195 KVGRLIEMGIRETEAIVYLSCNNWKLEQALQFIF 228
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 132 bits (319), Expect = 2e-31
Identities = 71/153 (46%), Positives = 97/153 (63%)
Frame = +1
Query: 61 MANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 240
MA +RI +E + ++ ++ V G S N + + IAGP D+P+ GG F LE+
Sbjct: 1 MAGQLPRRIIKETQRLL-ADPVPGISANPDESNARYFHVM--IAGPDDSPFAGGVFKLEL 57
Query: 241 KVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAG 420
+PE YP PK+RF+TKI+HPN+ + G ICLDILKD+W+ AL +RTVLLS+QALLSA
Sbjct: 58 FLPEEYPMAAPKVRFMTKIYHPNIDKL-GRICLDILKDKWSPALQIRTVLLSIQALLSAP 116
Query: 421 EPNDPQDAVVAKQFRENPRLFTMTARHWTNVYA 519
P DP VA+Q++ N TA+ WT YA
Sbjct: 117 NPEDPLATDVAEQWKTNEAEAIKTAKQWTMNYA 149
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 123 bits (297), Expect = 1e-28
Identities = 59/150 (39%), Positives = 90/150 (60%)
Frame = +1
Query: 70 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 249
+A KRI++E +++ + G V ++ + I GP ++PY+GG F L I P
Sbjct: 1 MALKRIQKELQDLGRDPPA---QCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFP 57
Query: 250 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 429
YPF PPK+ F T+I+HPN++S G+ICLDIL+ QW+ ALT+ VLLS+ +LL P+
Sbjct: 58 TDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPD 116
Query: 430 DPQDAVVAKQFRENPRLFTMTARHWTNVYA 519
DP +A+ ++ + + AR WT YA
Sbjct: 117 DPLVPEIARIYKTDRERYNQLAREWTQKYA 146
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 123 bits (297), Expect = 1e-28
Identities = 59/150 (39%), Positives = 90/150 (60%)
Frame = +1
Query: 70 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 249
+A KRI++E +++ + G V ++ + I GP ++PY+GG F L I P
Sbjct: 1 MALKRIQKELQDLGRDPPA---QCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFP 57
Query: 250 ETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPN 429
YPF PPK+ F T+I+HPN++S G+ICLDIL+ QW+ ALT+ VLLS+ +LL P+
Sbjct: 58 TDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPD 116
Query: 430 DPQDAVVAKQFRENPRLFTMTARHWTNVYA 519
DP +A+ ++ + + AR WT YA
Sbjct: 117 DPLVPEIARIYKTDRERYNQLAREWTQKYA 146
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 122 bits (295), Expect = 2e-28
Identities = 61/155 (39%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Frame = +1
Query: 175 LKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICL-DILK 351
++G I G +TPYEGG F L+IK+ E+YPF P ++F+TKIWHP+VS G ICL D+
Sbjct: 381 IQGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDN 440
Query: 352 DQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGGPN 531
W ++T+ VL+ +Q+ +S +P D + +Q N +F TA WT +AG
Sbjct: 441 GVWPVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEKTAEFWTKRFAGSRR 500
Query: 532 IVH--ECNSKVQRMLDMGIDEHQARVALSSYDWDL 630
+ EC KVQ M + +E + +ALS ++W L
Sbjct: 501 KPYNQECQQKVQLMSRVIRNEELSIIALSYHNWTL 535
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 101 bits (241), Expect = 7e-22
Identities = 47/139 (33%), Positives = 83/139 (59%)
Frame = +1
Query: 61 MANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 240
M + +R+ R+FK++ + + +N + I GP +TP+E GTF L +
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPA---GVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSL 57
Query: 241 KVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAG 420
+ E YP PP ++F++K++HPNV + G+ICLDIL+++W+ + +L S+Q+LL
Sbjct: 58 EFTEEYPNKPPTVKFISKMFHPNVYA-DGSICLDILQNRWSPTYDVAAILTSIQSLLDEP 116
Query: 421 EPNDPQDAVVAKQFRENPR 477
PN P +++ A+ ++EN R
Sbjct: 117 NPNSPANSLAAQLYQENRR 135
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 101 bits (241), Expect = 7e-22
Identities = 47/139 (33%), Positives = 83/139 (59%)
Frame = +1
Query: 61 MANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 240
M + +R+ R+FK++ + + +N + I GP +TP+E GTF L +
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPA---GVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSL 57
Query: 241 KVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAG 420
+ E YP PP ++F++K++HPNV + G+ICLDIL+++W+ + +L S+Q+LL
Sbjct: 58 EFTEEYPNKPPTVKFISKMFHPNVYA-DGSICLDILQNRWSPTYDVAAILTSIQSLLDEP 116
Query: 421 EPNDPQDAVVAKQFRENPR 477
PN P +++ A+ ++EN R
Sbjct: 117 NPNSPANSLAAQLYQENRR 135
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = +1
Query: 193 GPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAAL 372
GP DT YE G + + + +P+ YPF P I FL KI+HPN+ +G +CLD++ W A
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALY 100
Query: 373 TLRTVL-LSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYAGGPNIVHECN 549
L + L LL+ DP + A+ + P + T R + +A + C+
Sbjct: 101 DLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCREYVMRFASEHRAIEGCS 160
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 81.4 bits (192), Expect = 6e-16
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +1
Query: 196 PVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDIL-KDQWAAAL 372
P PY G F + I P YPF PPK+ F TKI+HPNV G CL I+ + W A
Sbjct: 41 PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDE-EGKFCLPIVTAENWKPAT 99
Query: 373 TLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVYA 519
V+++L +L++ EP+ P A VA++F+++ + F TA T +A
Sbjct: 100 KTEQVMMALLSLINEPEPSHPIRADVAEEFQKDHKKFMKTAEEHTRKHA 148
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 77.8 bits (183), Expect = 7e-15
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Frame = +1
Query: 100 KEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKI 279
K + E+ + +VNE ++ IAGP DTPYE G F +++ P+ YP P+I
Sbjct: 6 KRFLDDMEIAQQLYIIEMVNEEDKKITFHIAGPADTPYETGVFEVDLTFPDNYPNALPQI 65
Query: 280 RFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQ 459
+F T IW+ V TG + ++ + L + L ++ L + E ++
Sbjct: 66 KFQTLIWNCAVEPSTGQVHIENY-----SRLNVSEALSYIEDLFRSIEVDEEV------- 113
Query: 460 FRENPRLFTMTARHWTNVYAGGPNIVHE--CNSKVQRMLDMGIDEHQARVALSSYDWDLE 633
+F TAR WT +AGG + + KV +++MG ++ +AL DW+L
Sbjct: 114 ------MFYKTARFWTTEFAGGRPLPDDDWQKKKVDSLIEMGFSRLESILALGGSDWNLA 167
Query: 634 RATEQL 651
A EQL
Sbjct: 168 DAAEQL 173
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 76.6 bits (180), Expect = 2e-14
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Frame = +1
Query: 61 MANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 240
MA A KR+ E+KE+ G I + +N+ E + I GP +T + G F I
Sbjct: 1 MAGYALKRLMTEYKELTTRPPE--GIIAAPIDEDNFFEWECLITGPEETCFANGVFPARI 58
Query: 241 KVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDIL-------------KDQWAAALTLR 381
P+ YP +PPK+RF I+HPN+ + G +C+ IL ++W+ ++
Sbjct: 59 TFPQDYPLSPPKMRFTCGIFHPNIYA-DGRVCISILHAPGDDPTGYELSNERWSPVQSIE 117
Query: 382 TVLLSLQALLSAGEPND--PQDAVVAKQFRENPRLFTMTA 495
+LLS+ ++L+ EPND P + AK +RE+ F A
Sbjct: 118 KILLSVVSMLA--EPNDESPANVSAAKMWREDRAQFEKIA 155
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 75.4 bits (177), Expect = 4e-14
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Frame = +1
Query: 100 KEIMKSEEVIGGSIKLGLVNEN----WTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFN 267
K++ V GLV++N W L + GP DT YEGG F + P YP
Sbjct: 10 KQLADMRRVPVDGFSAGLVDDNDIYKWEVL---VIGPPDTLYEGGFFKAILDFPRDYPQK 66
Query: 268 PPKIRFLTKIWHPNVSSVTGAICLDILKD-------------QWAAALTLRTVLLSLQAL 408
PPK++F+++IWHPN+ G +C+ IL D +W T+ T+LLS+ ++
Sbjct: 67 PPKMKFISEIWHPNIDK-EGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISM 125
Query: 409 LSAGEPNDPQDAVVAKQFREN 471
L+ P + AK REN
Sbjct: 126 LTDPNFESPANVDAAKMQREN 146
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 72.5 bits (170), Expect = 3e-13
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
Frame = +1
Query: 61 MANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 240
M++ A +R+ +E ++ KSE G + + + + K + G T Y G F+L+
Sbjct: 1 MSDAATRRLMKELAQL-KSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQF 59
Query: 241 KVPETYPFNPPKIRFL--TKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLS 414
YPFN P++ F+ T HP++ S G ICL IL D W AL++++V LS+ ++LS
Sbjct: 60 TFGPQYPFNSPEVMFVGETIPAHPHIYS-NGHICLSILSDDWTPALSVQSVCLSILSMLS 118
Query: 415 AG-EPNDP-QDAVVAKQFRENP 474
+ E P DA+ + +NP
Sbjct: 119 SSKEKKHPIDDAIYVRTCSKNP 140
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 71.3 bits (167), Expect = 7e-13
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Frame = +1
Query: 73 AAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVPE 252
A + + E K + +S+ V G +I + +N I GP T Y+GG F I+ P
Sbjct: 11 ALRALTMELKNL-QSQPVEGFTIDVN--EDNLFVWTVGIYGPPKTLYQGGYFKASIRFPS 67
Query: 253 TYPFNPPKIRFLTKIWHPNVSSVTGAICLDILK-------------DQWAAALTLRTVLL 393
YP++PP ++F TK+WHPNV G +C+ IL ++W ++RT+LL
Sbjct: 68 NYPYSPPSMKFTTKVWHPNVYE-NGDLCISILHSPIDDPQSGELACERWNPTQSVRTILL 126
Query: 394 SLQALLSAGEPNDPQDAVVAKQFRE 468
S+ +LL+ + P + + +R+
Sbjct: 127 SVISLLNEPNTSSPANVDASVMYRK 151
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 63.7 bits (148), Expect = 1e-10
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Frame = +1
Query: 61 MANIAAKRIKREFKEIMKSEEV--IGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLL 234
M+ IAA R+ E K K I +K N + I G DT +EGG + +
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 235 EIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKD--QWAAALTLRTVLLSLQAL 408
+ + +P PPK +F ++HPNV +G +CL +L + W +++++ +L+ +Q L
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYP-SGTVCLSLLDENKDWKPSISIKQLLIGIQDL 119
Query: 409 LSAGEPNDPQDAVVAKQFREN 471
L+ DP A + + +N
Sbjct: 120 LNHPNIEDPAQAEAYQIYCQN 140
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 63.7 bits (148), Expect = 1e-10
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Frame = +1
Query: 61 MANIAAKRIKREFKEIMKSEEV--IGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLL 234
M+ IAA R+ E K K I +K N + I G DT +EGG + +
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 235 EIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKD--QWAAALTLRTVLLSLQAL 408
+ + +P PPK +F ++HPNV +G +CL +L + W +++++ +L+ +Q L
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYP-SGTVCLSLLDENKDWKPSISIKQLLIGIQDL 119
Query: 409 LSAGEPNDPQDAVVAKQFREN 471
L+ DP A + + +N
Sbjct: 120 LNHPNIEDPAQAEAYQIYCQN 140
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Frame = +1
Query: 196 PVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILK----DQ-- 357
P + Y GG F +I VP Y PP ++ LTK+WHPN++ G+ICL IL+ DQ
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINE-DGSICLSILRQNSLDQYG 125
Query: 358 WAAALTLRTVLLSLQALLS-AGEPNDPQDAVVAKQFRENPRLFTMTARHWTNVY 516
W L V+ L +L + + ND + A+ + +N F R + + Y
Sbjct: 126 WRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISRY 179
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 58.8 bits (136), Expect = 4e-09
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Frame = +1
Query: 61 MANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEI 240
++ +A +R+K++++ ++K +K + N E + I G TPYEGG ++ ++
Sbjct: 5 VSTVALQRLKKDYQRLLKEPVPF---MKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKL 61
Query: 241 KVPETYPFNPPKIRFLTKIWHPNVSSVTGA-ICL---DILKDQWAAALTLRTVLLSLQAL 408
P+ +PF PP I LT PN T +CL D D W A T+ T++ L +
Sbjct: 62 LFPKDFPFKPPAILMLT----PNGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLMSF 117
Query: 409 LSAGEP 426
++ +P
Sbjct: 118 MNDNQP 123
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 57.6 bits (133), Expect = 9e-09
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 211 YEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLD-ILKDQWAAALTLRTV 387
Y+ F L + V YPF PP ++F ++HPNV VT +C +L++ W T+ V
Sbjct: 57 YKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDV 116
Query: 388 LLSLQALLSAGEPNDPQDAVVAKQFREN 471
LL+L LL+ + + P + A + N
Sbjct: 117 LLNLIVLLNEPDLSRPVNIDAAHDYIHN 144
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 13/124 (10%)
Frame = +1
Query: 79 KRIKREFKEIMKSEEVIGGSIKLGLVNENWTEL-KGEIAGPVDTPYEGGTFLLEIKVPET 255
KRI +E I + + + +E ++ K I+GP DTPY G F +I P
Sbjct: 412 KRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPTG 471
Query: 256 YPFNPPKIRFLTK-----IWHPNVSSVTGAICLDIL-------KDQWAAALTLRTVLLSL 399
YPF+PPK FLT ++PN+ + G ICL IL +++W +L VL+S+
Sbjct: 472 YPFSPPKCAFLTTGSGNVRFNPNLYN-DGKICLSILGTWEGRPEEKWNPYCSLMQVLVSI 530
Query: 400 QALL 411
Q ++
Sbjct: 531 QEVI 534
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 49.2 bits (112), Expect = 3e-06
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Frame = +1
Query: 82 RIKREFKEIMKSEEVIGGSIKLGLVNEN---WTELKGEIAGPVDTPYEGGTFLLEIKVPE 252
R+ E +E K + G+I GL +++ T I GP TPYE + L+I+
Sbjct: 9 RLLEELEEGQKGKG--DGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGG 66
Query: 253 TYPFNPPKIRFLTKIWHPNVSSVTGAI---CLDILKDQWAAALTLRTVLLSLQALLSAGE 423
YP PP +RF TK+ V+ G I L L++ W+ + ++TVL ++ + +
Sbjct: 67 NYPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLRN-WSNSYMIKTVLEDIRKNMMMAK 125
Query: 424 PN 429
N
Sbjct: 126 EN 127
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 49.2 bits (112), Expect = 3e-06
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
Frame = +1
Query: 166 WTELKGEIAGPVDTPYEGGTFLLEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDI 345
W + GP +P+EGG + + + +P PP F T + HPNV + G+I L +
Sbjct: 68 WCSWICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNV-DLRGSIYLKM 125
Query: 346 L-KDQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFTMTAR--HWT-NV 513
L ++ W++ +L+ +L + LL+ + + ++ + AR WT N
Sbjct: 126 LEQEHWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQRENYEAKARAYAWTVNP 185
Query: 514 YAGGPNIVHECNSKVQR 564
A G V E NS +QR
Sbjct: 186 NAVGYMEVSE-NSGIQR 201
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Frame = +1
Query: 58 TMANIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLE 237
T ++ A +R+++++ ++M ++ + G IK +N E + G DTP+ GG + +
Sbjct: 15 TASSSAVRRLQKDYAKLM--QDPVDG-IKALPNEDNILEWHYCLRGSPDTPFYGGYYWGK 71
Query: 238 IKVPETYPFNPPKIRFLTKIWHPNVSSVTGA-ICL---DILKDQWAAALTLRTVLLSLQA 405
+ E +P++PP I +T PN T +CL D + W T+ +L+ L +
Sbjct: 72 VIFKENFPWSPPAITMIT----PNGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHS 127
Query: 406 LLSAGEP 426
++ P
Sbjct: 128 FMNENSP 134
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 41.5 bits (93), Expect = 6e-04
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +1
Query: 67 NIAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKV 246
N +R+ +E E+ + E+ + +N E I G + T +EGG + I
Sbjct: 9 NAGVRRLMKEAMELRQPTEMYHAQP----MEDNLFEWHFTIRGTLGTDFEGGIYHGRIIF 64
Query: 247 PETYPFNPPKIRFLTKIWHPNVS-SVTGAICLDIL---KDQWAAALTLRTVLLSLQALL 411
P YP PP + LT PN + +CL I + W + ++RT LL+L L
Sbjct: 65 PADYPMKPPNLILLT----PNGRFELNKKVCLSISGYHPETWLPSWSIRTALLALIGFL 119
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 187 IAGPVDTPYEGGTFLLEIKV-PETYPFNPPKIRFLTKIWHPNV 312
I GPV + YEGGTF +I + P P++ F T I+HPN+
Sbjct: 68 IDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNL 110
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 34.3 bits (75), Expect = 0.091
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +1
Query: 70 IAAKRIKREFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGTFLLEIKVP 249
+A KRI++E ++ + G V ++ + I GP ++PY+GG F L I
Sbjct: 1 MALKRIQKELHDLGRDPPA---QCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTITSR 57
Query: 250 ETYPFNPPKI 279
+T N ++
Sbjct: 58 QTIHSNHQRL 67
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 382 TVLLSLQALLSAGEPNDPQDAVVAKQFRENPRLFT 486
TVLL++QA L +GE N Q + + +NP F+
Sbjct: 804 TVLLNIQATLPSGESNQTQVVIFIEDHNDNPPQFS 838
>AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical
protein Y51A2D.12 protein.
Length = 334
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -3
Query: 174 FSPILIHESQFYGATNHLFTFHYLFELSFYTFGCYIC 64
+S + ++ ++ + N TFH+ F + Y F C++C
Sbjct: 79 YSNLNLNNTENWFPLNIFHTFHFEFAYTQYIFNCFVC 115
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 94 EFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGP 198
EF K+ +GG + G+VN+++ L+G + GP
Sbjct: 303 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGP 337
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 94 EFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGP 198
EF K+ +GG + G+VN+++ L+G + GP
Sbjct: 303 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGP 337
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 94 EFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGP 198
EF K+ +GG + G+VN+++ L+G + GP
Sbjct: 205 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGP 239
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 94 EFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGP 198
EF K+ +GG + G+VN+++ L+G + GP
Sbjct: 255 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGP 289
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 94 EFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGP 198
EF K+ +GG + G+VN+++ L+G + GP
Sbjct: 303 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGP 337
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 94 EFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGP 198
EF K+ +GG + G+VN+++ L+G + GP
Sbjct: 205 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGP 239
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 94 EFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGP 198
EF K+ +GG + G+VN+++ L+G + GP
Sbjct: 255 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGP 289
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 94 EFKEIMKSEEVIGGSIKLGLVNENWTELKGEIAGP 198
EF K+ +GG + G+VN+++ L+G + GP
Sbjct: 303 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGP 337
>U40060-6|AAA81144.1| 268|Caenorhabditis elegans Hypothetical
protein F38B6.3 protein.
Length = 268
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 352 DQWAAALTLRTVLLSLQALLSAGEPNDPQDAVVAKQF 462
DQ+ A +R L L+ LL+ P DP V +QF
Sbjct: 231 DQFTVADVIRNNLNQLRTLLNGNAPIDPNSVFVFRQF 267
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 502 WTNVYAGGPNIVHECNSKVQRMLDM 576
W NV+ + VH C +V+R+L++
Sbjct: 5 WNNVFHQRQDFVHSCTHRVERLLEL 29
>Z77662-11|CAI70418.1| 358|Caenorhabditis elegans Hypothetical
protein F47B8.12 protein.
Length = 358
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 621 II*GESYSGLMFINTHVQHTLHFAIAFV 538
I+ +++SGLM +NT Q HF+ F+
Sbjct: 97 IVMNDTFSGLMIVNTGWQFNFHFSQIFL 124
>U55365-9|AAA98574.1| 346|Caenorhabditis elegans Hypothetical
protein C12D5.9 protein.
Length = 346
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 288 QKAYLRRIERISFGNFNFKEEGPTFIRSI-NRTSYLAFEF 172
++ Y R+ E+I F N+ +E P F ++ N++ + EF
Sbjct: 94 KEVYERKCEKIEFNNYKMQECIPKFYETVYNKSRHCTVEF 133
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 232 LEIKVPETYPFNPPKIRFLTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALL 411
L I +P TYP +P ++F P S G + + + A T+RT+ ++A
Sbjct: 598 LRISLPRTYPIDPATVQFDRTF--PQ-DSEHGPVLQKLFEKNLGAKTTVRTMTDFVEAYC 654
Query: 412 SAGE 423
SA E
Sbjct: 655 SACE 658
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 106 IMKSEEVIGGSIKLGLVNENWTELKGEIAGPVDTPYEGGT 225
+ +SEEV G IK+ + N E ++AGP P GT
Sbjct: 65 LRESEEVTGDPIKVEASDTNRNEENPDLAGPPAEPVIRGT 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,495,126
Number of Sequences: 27780
Number of extensions: 348846
Number of successful extensions: 984
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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