Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19c11
(737 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 3.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 3.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 3.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 3.0
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 3.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 3.0
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 4.0
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 4.0
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 22 6.9
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 22 6.9
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 9.1
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 9.1
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.0
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 51 NFNNGKYSSQTYKK 92
N+NN Y++ YKK
Sbjct: 96 NYNNNNYNNNNYKK 109
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.0
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 51 NFNNGKYSSQTYKK 92
N+NN Y++ YKK
Sbjct: 96 NYNNNNYNNNNYKK 109
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.0
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 51 NFNNGKYSSQTYKK 92
N+NN Y++ YKK
Sbjct: 96 NYNNNNYNNNNYKK 109
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.0
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 51 NFNNGKYSSQTYKK 92
N+NN Y++ YKK
Sbjct: 96 NYNNNNYNNNNYKK 109
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.0 bits (47), Expect = 3.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 493 ARHWTN-VYAGGPNIVHECNSKVQRMLDMGIDEHQARVALSSYD 621
A+H N +YA IVHE ++ ++ I E + V LS+ D
Sbjct: 333 AQHKENELYANLMKIVHEKQQEITGLIQNIIQEMKNDVLLSNND 376
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 250 ETYPFNP 270
ETYPFNP
Sbjct: 175 ETYPFNP 181
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.0 bits (47), Expect = 3.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 493 ARHWTN-VYAGGPNIVHECNSKVQRMLDMGIDEHQARVALSSYD 621
A+H N +YA IVHE ++ ++ I E + V LS+ D
Sbjct: 371 AQHKENELYANLMKIVHEKQQEITGLIQNIIQEMKNDVLLSNND 414
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 250 ETYPFNP 270
ETYPFNP
Sbjct: 213 ETYPFNP 219
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 45 K*NFNNGKYSSQTYKKRV 98
K N+NN Y++ Y K++
Sbjct: 95 KYNYNNNNYNNNNYNKKL 112
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 45 K*NFNNGKYSSQTYKKRV 98
K N+NN Y++ Y K++
Sbjct: 95 KYNYNNNNYNNNNYNKKL 112
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 21.8 bits (44), Expect = 6.9
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -2
Query: 553 CYCIRVLYLAHQH 515
CYC R YL +H
Sbjct: 91 CYCCRESYLKERH 103
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 21.8 bits (44), Expect = 6.9
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -2
Query: 553 CYCIRVLYLAHQH 515
CYC R YL +H
Sbjct: 91 CYCCRESYLKERH 103
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.4 bits (43), Expect = 9.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 282 AYLRRIERISFGNFN 238
AYL R ERI++ N N
Sbjct: 445 AYLSRSERINYYNVN 459
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 253 TYPFNPPKIRFLTKIWHP 306
TY F+ P++ + K +HP
Sbjct: 137 TYNFDYPQVPYTVKNFHP 154
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,224
Number of Sequences: 438
Number of extensions: 4476
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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