Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c10
         (615 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81531-6|CAB04317.2|  330|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81100-1|CAB03194.1|  331|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AC024090-3|AAK67220.3|  370|Caenorhabditis elegans Hypothetical ...    28   6.1  
Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF047657-1|AAK18951.1|  328|Caenorhabditis elegans Serpentine re...    27   8.1  
AF022985-11|AAB69967.2|  650|Caenorhabditis elegans Hypothetical...    27   8.1  
AC024090-4|AAK67221.1|  300|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z81531-6|CAB04317.2|  330|Caenorhabditis elegans Hypothetical
           protein F36D3.6 protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 396 YSHSYN*KKQQLHNLNEKPCVVP 464
           YS S+N ++Q+L+ L E PC+ P
Sbjct: 156 YSDSFNYEEQRLYILKEYPCIPP 178


>Z81100-1|CAB03194.1|  331|Caenorhabditis elegans Hypothetical
           protein K08G2.7 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = -3

Query: 178 WLKLMICFLHNVIFTSFLYFYLKPQLVSSVAHDFGFFKILNXLIIFMYYLFHLH 17
           ++K+    L  +IF  +LYF  +P L+   AH     K LN   I MY+ F  H
Sbjct: 142 YVKITPTTLQWIIFIEYLYFLAEPLLLVYFAH-ISNLKHLNYQ-IDMYFFFGEH 193


>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -1

Query: 474 STCVERRKASRLGCVTAAFFSCNCDCSNLIPEDHAATFSV 355
           ++CV++   S   C TA   SC   C  ++ E    TF +
Sbjct: 750 TSCVQQNSQSVPQCSTACTDSCRSSCVEIVKESAEPTFKL 789


>AC024090-3|AAK67220.3|  370|Caenorhabditis elegans Hypothetical
           protein C52E2.6 protein.
          Length = 370

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 235 MEHIIDFNSLMLMITHFVKRSNPVIKDVSL*RLRYDKNTDHRK 363
           +EH    + L L I HF+  SNP +++  +  L  D   D+++
Sbjct: 240 IEHPFTLSDLNLFIKHFINGSNPRLEEAHI-ALAGDNKEDYKE 281


>Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical
           protein ZK1067.5 protein.
          Length = 427

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = -3

Query: 175 LKLMICFLHNVIF--TSFLYFYLKPQL-VSSVAHDFGFFKILNXLIIFMYYLFHL 20
           L +++C + ++++   ++L+ Y+     VS V+H F FF I   L      LFHL
Sbjct: 81  LFIVVCVVSHMLYHTNTYLFQYISKYCSVSIVSHYFHFFLISCFLANLRLALFHL 135


>Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical
           protein F49C12.5b protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -2

Query: 278 VIININELKSIMCSIQAPKPSNH-INVENDETTLLVKT 168
           ++++IN +KS     Q P P    I+ END T+++VKT
Sbjct: 41  LVMSINLVKSPNELAQHPNPPELVISAENDTTSIMVKT 78


>Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical
           protein F49C12.5a protein.
          Length = 507

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -2

Query: 278 VIININELKSIMCSIQAPKPSNH-INVENDETTLLVKT 168
           ++++IN +KS     Q P P    I+ END T+++VKT
Sbjct: 68  LVMSINLVKSPNELAQHPNPPELVISAENDTTSIMVKT 105


>AF047657-1|AAK18951.1|  328|Caenorhabditis elegans Serpentine
           receptor, class j protein54 protein.
          Length = 328

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = -3

Query: 166 MICFLHNVIFTSFLYFYLKPQLVSSVAHDFGFFKILNXLIIFMYYL 29
           ++   + V+ T F+Y YL     S   H F ++  ++ +I  +Y++
Sbjct: 98  LVAASYAVLLTHFIYRYLVIHNSSLATHKFHWYLTISAIIFVLYFV 143


>AF022985-11|AAB69967.2|  650|Caenorhabditis elegans Hypothetical
           protein T15B7.14 protein.
          Length = 650

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/53 (24%), Positives = 30/53 (56%)
 Frame = -3

Query: 184 LCWLKLMICFLHNVIFTSFLYFYLKPQLVSSVAHDFGFFKILNXLIIFMYYLF 26
           L ++ + +C+L+ +I+T   + + + Q    +A   GF+  L  +++  Y+LF
Sbjct: 93  LFYIAVAVCYLYWLIYTFCTFKFSRSQFDLLIAPYRGFY--LKSVLMLFYFLF 143


>AC024090-4|AAK67221.1|  300|Caenorhabditis elegans Hypothetical
           protein C52E2.7 protein.
          Length = 300

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 253 FNSLMLMITHFVKRSNPVIKDVSL 324
           F++L L + HF+  SNP +K++++
Sbjct: 204 FSNLNLFLRHFINGSNPSLKEMNI 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,179,545
Number of Sequences: 27780
Number of extensions: 218011
Number of successful extensions: 604
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)