Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c08
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.51 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.3  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   6.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   8.3  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   8.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 533  TTGTHTWWLNLTTSP 577
            TT   TWW + TTSP
Sbjct: 1036 TTKPSTWWSSTTTSP 1050


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 9    FCDCRLING*LYRHH 53
            FCD   I+   YRHH
Sbjct: 1058 FCDTPFISKGAYRHH 1072


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = -3

Query: 267 ILSIGIDGDQVVWSPFYAFSSVGVLYNAE 181
           I+ + +  +Q+ W        VG++Y A+
Sbjct: 617 IICVIVQSEQIAWLHLLYIFLVGIMYAAD 645


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 71  VREMNYTTSTKTCSRKTGYF*RPVSVGRSPISTQ 172
           V   +YT   K+C     Y   P+++ +  +ST+
Sbjct: 56  VSSNSYTPKIKSCRPFKAYIKDPLTLAQGLVSTE 89


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 260 VSESMVIKSFGRHSMHLVPS 201
           ++E+++ +  GR  +HLVPS
Sbjct: 417 INEALLKRLNGRGVIHLVPS 436


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
          protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +3

Query: 45 RHHHHHV 65
          +HHHHH+
Sbjct: 52 QHHHHHL 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,957
Number of Sequences: 336
Number of extensions: 3252
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)