Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c08
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   0.89 
AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase p...    25   1.5  
AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.         25   1.5  
X93562-1|CAA63775.1|  131|Anopheles gambiae defensin protein.          23   6.0  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   6.0  
AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein p...    23   7.9  
AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein p...    23   7.9  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 22.6 bits (46), Expect(2) = 0.89
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 39  LYRHHHHH 62
           L+ HHHHH
Sbjct: 121 LHHHHHHH 128



 Score = 21.8 bits (44), Expect(2) = 0.89
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 48  HHHHHVYEFG 77
           HHHHH +  G
Sbjct: 122 HHHHHHHHHG 131


>AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase
           protein.
          Length = 557

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = -3

Query: 270 LILSIGIDGDQVVWSPFYAFSSVGVLYNAEHPD*VEIGDRPTDTGL 133
           L  ++G +    +W  ++ +  V       HPD + +G+   D GL
Sbjct: 91  LFFNVGDNFQGTIWYNYHRWRVVARFIKLLHPDAMTLGNHEFDDGL 136


>AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.
          Length = 557

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = -3

Query: 270 LILSIGIDGDQVVWSPFYAFSSVGVLYNAEHPD*VEIGDRPTDTGL 133
           L  ++G +    +W  ++ +  V       HPD + +G+   D GL
Sbjct: 91  LFFNVGDNFQGTIWYNYHRWRVVARFIKLLHPDAMTLGNHEFDDGL 136


>X93562-1|CAA63775.1|  131|Anopheles gambiae defensin protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 379 RLGVFL*CAPEDSRNPMLCYRLGSVVC 299
           +L + L C P  S +P L  +  ++VC
Sbjct: 11  KLKLVLLCLPRASSSPQLIMKCATIVC 37


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 18/62 (29%), Positives = 25/62 (40%)
 Frame = +3

Query: 87   TRPVQRLVHARRGTSKDQCRSAGLRFQLNRDALHCTERRRN*MHRMATKRLDHHRFRYSR 266
            TR   R V  R  T + +    G R  +   +   +ERR N   RMA  R  H + +   
Sbjct: 1049 TRNDLRNVARRTQTVRQREEQCGERPSMPSSSPRTSERRANIRARMARLRQRHRQHQQDE 1108

Query: 267  SR 272
             R
Sbjct: 1109 RR 1110


>AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein
           protein.
          Length = 152

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 440 PGFVENCICWL 408
           PGF  N ICWL
Sbjct: 91  PGFTINRICWL 101


>AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein
           protein.
          Length = 152

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 440 PGFVENCICWL 408
           PGF  N ICWL
Sbjct: 91  PGFTINRICWL 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,171
Number of Sequences: 2352
Number of extensions: 13937
Number of successful extensions: 52
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)