Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19c08
(617 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051746-1|AAK93170.1| 715|Drosophila melanogaster LD27216p pro... 95 7e-20
AE014134-61|AAF51531.1| 715|Drosophila melanogaster CG11490-PA ... 95 7e-20
X58374-1|CAA41263.1| 702|Drosophila melanogaster crn protein. 30 2.9
AY051666-1|AAK93090.1| 702|Drosophila melanogaster LD21701p pro... 30 2.9
AL009195-5|CAA15705.1| 702|Drosophila melanogaster EG:30B8.1,FB... 30 2.9
AE014298-369|AAF45760.1| 702|Drosophila melanogaster CG3193-PA ... 30 2.9
AY069326-1|AAL39471.1| 188|Drosophila melanogaster LD04457p pro... 29 5.0
AE013599-2657|AAM68185.1| 188|Drosophila melanogaster CG14502-P... 29 5.0
AE013599-2656|AAF57720.1| 188|Drosophila melanogaster CG14502-P... 29 5.0
AE014298-13|AAX52468.1| 545|Drosophila melanogaster CG3114-PG, ... 28 8.8
AE014298-10|AAX52466.1| 579|Drosophila melanogaster CG3114-PF, ... 28 8.8
>AY051746-1|AAK93170.1| 715|Drosophila melanogaster LD27216p
protein.
Length = 715
Score = 95.1 bits (226), Expect = 7e-20
Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 21/190 (11%)
Frame = +1
Query: 106 LFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTK-------CIEWRPNDLITIDSDTQ 264
LFT DGVLLK + ++D N+ G L +V+ + +EW+PND I I D+Q
Sbjct: 42 LFTHDGVLLKKASAEHIADLNTSGSLSLVEYSRSIAEMPRRRLLLEWQPNDSIMIADDSQ 101
Query: 265 DQ-EWAVVNTVGRRQRTLSG----NI----TSDYANLRARIIKIPLDDLKTFRITRNNQQ 417
DQ +WA+V+ + R RT S N S A R+R+++ L+DL + + Q
Sbjct: 102 DQGDWALVDRISGRTRTTSECRAFNTRPIEPSGGATTRSRVMRAQLEDLSSVEVRHRGQT 161
Query: 418 MQFSTK--PGVWQNTFYFQHGNAEIFVAYLKN-HL-KTAKT-RHDRNTYMVVEPNDESQV 582
++F K GV + F+FQHGNA++FV +++ HL + A+T R Y ++ E+Q
Sbjct: 162 IRFMRKGANGV-HSEFFFQHGNADLFVRSMRDQHLIENAETSRSGGEVYAIL--TTENQK 218
Query: 583 LNKSFAELXI 612
L K+FAEL I
Sbjct: 219 LKKTFAELDI 228
>AE014134-61|AAF51531.1| 715|Drosophila melanogaster CG11490-PA
protein.
Length = 715
Score = 95.1 bits (226), Expect = 7e-20
Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 21/190 (11%)
Frame = +1
Query: 106 LFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTK-------CIEWRPNDLITIDSDTQ 264
LFT DGVLLK + ++D N+ G L +V+ + +EW+PND I I D+Q
Sbjct: 42 LFTHDGVLLKKASAEHIADLNTSGSLSLVEYSRSIAEMPRRRLLLEWQPNDSIMIADDSQ 101
Query: 265 DQ-EWAVVNTVGRRQRTLSG----NI----TSDYANLRARIIKIPLDDLKTFRITRNNQQ 417
DQ +WA+V+ + R RT S N S A R+R+++ L+DL + + Q
Sbjct: 102 DQGDWALVDRISGRTRTTSECRAFNTRPIEPSGGATTRSRVMRAQLEDLSSVEVRHRGQT 161
Query: 418 MQFSTK--PGVWQNTFYFQHGNAEIFVAYLKN-HL-KTAKT-RHDRNTYMVVEPNDESQV 582
++F K GV + F+FQHGNA++FV +++ HL + A+T R Y ++ E+Q
Sbjct: 162 IRFMRKGANGV-HSEFFFQHGNADLFVRSMRDQHLIENAETSRSGGEVYAIL--TTENQK 218
Query: 583 LNKSFAELXI 612
L K+FAEL I
Sbjct: 219 LKKTFAELDI 228
>X58374-1|CAA41263.1| 702|Drosophila melanogaster crn protein.
Length = 702
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = +1
Query: 412 QQMQFSTKPGVWQNTFYFQHGNAEIFVAYLKNHLKTAKTRHDRNTY 549
QQ + +W+ +H N +++ Y + +K + H RN +
Sbjct: 88 QQQEIQPARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLW 133
>AY051666-1|AAK93090.1| 702|Drosophila melanogaster LD21701p
protein.
Length = 702
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = +1
Query: 412 QQMQFSTKPGVWQNTFYFQHGNAEIFVAYLKNHLKTAKTRHDRNTY 549
QQ + +W+ +H N +++ Y + +K + H RN +
Sbjct: 88 QQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLW 133
>AL009195-5|CAA15705.1| 702|Drosophila melanogaster
EG:30B8.1,FBgn0000377;crn protein.
Length = 702
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = +1
Query: 412 QQMQFSTKPGVWQNTFYFQHGNAEIFVAYLKNHLKTAKTRHDRNTY 549
QQ + +W+ +H N +++ Y + +K + H RN +
Sbjct: 88 QQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLW 133
>AE014298-369|AAF45760.1| 702|Drosophila melanogaster CG3193-PA
protein.
Length = 702
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = +1
Query: 412 QQMQFSTKPGVWQNTFYFQHGNAEIFVAYLKNHLKTAKTRHDRNTY 549
QQ + +W+ +H N +++ Y + +K + H RN +
Sbjct: 88 QQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLW 133
>AY069326-1|AAL39471.1| 188|Drosophila melanogaster LD04457p
protein.
Length = 188
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 178 MLCIVQNADGTKCIEWRPNDLITIDSD-TQDQEWAVVNTVGRRQRTLSGNITSDY 339
+L IV +G + ++ P + T +D T+ + A V VGR + LSGNI Y
Sbjct: 15 ILLIVDQCNGKRKWDYEPLSIETYTTDETKLKIAAKVERVGRGEYALSGNIEFKY 69
>AE013599-2657|AAM68185.1| 188|Drosophila melanogaster CG14502-PB,
isoform B protein.
Length = 188
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 178 MLCIVQNADGTKCIEWRPNDLITIDSD-TQDQEWAVVNTVGRRQRTLSGNITSDY 339
+L IV +G + ++ P + T +D T+ + A V VGR + LSGNI Y
Sbjct: 15 ILLIVDQCNGKRKWDYEPLSIETYTTDETKLKIAAKVERVGRGEYALSGNIEFKY 69
>AE013599-2656|AAF57720.1| 188|Drosophila melanogaster CG14502-PA,
isoform A protein.
Length = 188
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 178 MLCIVQNADGTKCIEWRPNDLITIDSD-TQDQEWAVVNTVGRRQRTLSGNITSDY 339
+L IV +G + ++ P + T +D T+ + A V VGR + LSGNI Y
Sbjct: 15 ILLIVDQCNGKRKWDYEPLSIETYTTDETKLKIAAKVERVGRGEYALSGNIEFKY 69
>AE014298-13|AAX52468.1| 545|Drosophila melanogaster CG3114-PG,
isoform G protein.
Length = 545
Score = 28.3 bits (60), Expect = 8.8
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 67 TSSGDELHDQYKDLFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGT-KCIEWRPND-L 240
+ SGDE D+ +L + T++ P + N + QNADGT I+ PN+ +
Sbjct: 355 SQSGDE--DEDMELSNPPTIHTVTTMTPPTGNSNYTTQTVLSQNADGTVSLIQVDPNNPI 412
Query: 241 ITIDSDTQDQ 270
IT+ T Q
Sbjct: 413 ITLPDGTTAQ 422
>AE014298-10|AAX52466.1| 579|Drosophila melanogaster CG3114-PF,
isoform F protein.
Length = 579
Score = 28.3 bits (60), Expect = 8.8
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 67 TSSGDELHDQYKDLFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGT-KCIEWRPND-L 240
+ SGDE D+ +L + T++ P + N + QNADGT I+ PN+ +
Sbjct: 355 SQSGDE--DEDMELSNPPTIHTVTTMTPPTGNSNYTTQTVLSQNADGTVSLIQVDPNNPI 412
Query: 241 ITIDSDTQDQ 270
IT+ T Q
Sbjct: 413 ITLPDGTTAQ 422
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,074,769
Number of Sequences: 53049
Number of extensions: 622171
Number of successful extensions: 2901
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2725
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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