Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c05
         (352 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1; ...    75   4e-13
UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1; ...    44   7e-04
UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostrid...    35   0.44 
UniRef50_O15792 Cluster: CG2; n=89; Plasmodium falciparum|Rep: C...    33   1.8  
UniRef50_Q48574 Cluster: ORFC; n=2; Leptospira interrogans|Rep: ...    32   2.4  
UniRef50_Q0R0E6 Cluster: Ubiquitin carrier protein; n=1; Symbiod...    31   4.1  
UniRef50_UPI0000D8AF12 Cluster: UPI0000D8AF12 related cluster; n...    30   9.5  
UniRef50_A2APP3 Cluster: Novel protein similar to chromosome X o...    30   9.5  
UniRef50_Q2GDU4 Cluster: ATP-dependent DNA helicase, UvrD/REP fa...    30   9.5  
UniRef50_Q9SGI0 Cluster: T13O15.1 protein; n=2; Arabidopsis thal...    30   9.5  

>UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1;
           Thermobia domestica|Rep: Putative uncharacterized
           protein - Thermobia domestica (firebrat)
          Length = 53

 Score = 74.5 bits (175), Expect = 4e-13
 Identities = 35/53 (66%), Positives = 43/53 (81%)
 Frame = +1

Query: 37  LIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLKSYMI 195
           +I R +YLRDNSVIFF +S +++ LRPRCWIKI  +CRSL + SVR LKSYMI
Sbjct: 1   MIVRLSYLRDNSVIFFENSYRQERLRPRCWIKILSRCRSLVYRSVRPLKSYMI 53


>UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1;
           Haemaphysalis qinghaiensis|Rep: Putative uncharacterized
           protein - Haemaphysalis qinghaiensis
          Length = 30

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = +3

Query: 144 M*KFKILICSIIKILHDLSSNRCEPGWFLS 233
           M K K  +CS  +ILHDLS +RCE GWFLS
Sbjct: 1   MKKLKKEVCSTFEILHDLSLDRCESGWFLS 30


>UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostridium
           botulinum A|Rep: Conserved domain protein - Clostridium
           botulinum (strain ATCC 19397 / Type A)
          Length = 479

 Score = 34.7 bits (76), Expect = 0.44
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 153 FKILICSIIKILHDLSSNRCEPGWFLSFNIYNILVRK 263
           +KI    IIK+++ L  N CE G+  SFN YN + ++
Sbjct: 277 YKISDYRIIKLINALEDNSCEVGYHYSFNSYNSISKR 313


>UniRef50_O15792 Cluster: CG2; n=89; Plasmodium falciparum|Rep: CG2 -
            Plasmodium falciparum
          Length = 2819

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +1

Query: 67   NSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLKSY 189
            N+ I FF + + K L  R  IK  F  RSLKF     +KSY
Sbjct: 2127 NNYIMFFQTTQNKYLLNRRLIKKAFFLRSLKFDDFNDIKSY 2167


>UniRef50_Q48574 Cluster: ORFC; n=2; Leptospira interrogans|Rep:
           ORFC - Leptospira interrogans serovar
           Icterohaemorrhagiae
          Length = 85

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +1

Query: 1   VYINK*LNDPILLIKRKNYLRDNSVIFFFSSNKKKSLRPRC 123
           VY NK L D  ++++   + + N + F FS N++++ + RC
Sbjct: 7   VYYNKLLYDQKVILRLLEFYKSNYIPFLFSENQRRTRQLRC 47


>UniRef50_Q0R0E6 Cluster: Ubiquitin carrier protein; n=1;
           Symbiodinium sp. C3|Rep: Ubiquitin carrier protein -
           Symbiodinium sp. C3
          Length = 268

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -1

Query: 331 NNY*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRNQPGSHRFE-LRSCKILMIE 170
           N+Y FK   I F+T  Y+CN+ +     L ILKD   P    F+ L S + LM +
Sbjct: 183 NDYPFKPPKINFHTPIYHCNVNTNGAICLDILKDSWSPSLSVFKCLESIRALMAD 237


>UniRef50_UPI0000D8AF12 Cluster: UPI0000D8AF12 related cluster; n=1;
           Mus musculus|Rep: UPI0000D8AF12 UniRef100 entry - Mus
           musculus
          Length = 648

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -1

Query: 100 FYLN*KKKLRCYP*GNFFF*SIKLDHLITY 11
           F++N ++KL C   G+ FF + KL+H + Y
Sbjct: 224 FHMNSERKLECIRFGSVFFGTSKLEHALLY 253


>UniRef50_A2APP3 Cluster: Novel protein similar to chromosome X open
           reading frame 22 (CXorf22) protein; n=8; Eutheria|Rep:
           Novel protein similar to chromosome X open reading frame
           22 (CXorf22) protein - Mus musculus (Mouse)
          Length = 943

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -1

Query: 100 FYLN*KKKLRCYP*GNFFF*SIKLDHLITY 11
           F++N ++KL C   G+ FF + KL+H + Y
Sbjct: 226 FHMNSERKLECIRFGSVFFGTSKLEHALLY 255


>UniRef50_Q2GDU4 Cluster: ATP-dependent DNA helicase, UvrD/REP
           family; n=1; Neorickettsia sennetsu str. Miyayama|Rep:
           ATP-dependent DNA helicase, UvrD/REP family -
           Neorickettsia sennetsu (strain Miyayama)
          Length = 907

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 1   VYINK*LNDPILLIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVR 174
           V+ +K    PI+ I   NY+  N  IFFF+ +    L     +++  + R +K  S+R
Sbjct: 590 VHGSKGTQSPIVFIVDSNYVPQNRDIFFFTEDGTPLLSSETHVRVVQEMRDVKKESIR 647


>UniRef50_Q9SGI0 Cluster: T13O15.1 protein; n=2; Arabidopsis
           thaliana|Rep: T13O15.1 protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 1020

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +1

Query: 28  PILLIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF 162
           P  L+ R+N  R NS IF  S++ +K+L      +I  K RSL F
Sbjct: 28  PNTLVSRRNVSRANSGIFCSSASGRKTLPQSAIQRIAEKLRSLGF 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,333,761
Number of Sequences: 1657284
Number of extensions: 3916562
Number of successful extensions: 6008
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6007
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)