Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c05
         (352 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024449-1|ABC86511.1| 1403|Drosophila melanogaster GH15984p pro...    27   5.1  
AY118968-1|AAM50828.1|  531|Drosophila melanogaster LD45876p pro...    27   5.1  
AL031884-3|CAA21413.1|  658|Drosophila melanogaster EG:23E12.2 p...    27   5.1  

>BT024449-1|ABC86511.1| 1403|Drosophila melanogaster GH15984p protein.
          Length = 1403

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
 Frame = +1

Query: 19   LNDPILLIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLK--SYM 192
            L  P L+++  N   + ++ FF SS+ +++      + +K KC      ++ SL+  +++
Sbjct: 990  LATPNLVLRLGNKANNKTITFFLSSDFERTQWIDSILSLKQKCNLPGANTINSLEVTAFI 1049

Query: 193  I*VQTGV-SQVGFYLL 237
            + +Q G+ +++G YL+
Sbjct: 1050 VAMQKGMKTEMGSYLM 1065


>AY118968-1|AAM50828.1|  531|Drosophila melanogaster LD45876p
           protein.
          Length = 531

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
 Frame = +1

Query: 19  LNDPILLIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLK--SYM 192
           L  P L+++  N   + ++ FF SS+ +++      + +K KC      ++ SL+  +++
Sbjct: 118 LATPNLVLRLGNKANNKTITFFLSSDFERTQWIDSILSLKQKCNLPGANTINSLEVTAFI 177

Query: 193 I*VQTGV-SQVGFYLL 237
           + +Q G+ +++G YL+
Sbjct: 178 VAMQKGMKTEMGSYLM 193


>AL031884-3|CAA21413.1|  658|Drosophila melanogaster EG:23E12.2
           protein.
          Length = 658

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
 Frame = +1

Query: 19  LNDPILLIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLK--SYM 192
           L  P L+++  N   + ++ FF SS+ +++      + +K KC      ++ SL+  +++
Sbjct: 298 LATPNLVLRLGNKANNKTITFFLSSDFERTQWIDSILSLKQKCNLPGANTINSLEVTAFI 357

Query: 193 I*VQTGV-SQVGFYLL 237
           + +Q G+ +++G YL+
Sbjct: 358 VAMQKGMKTEMGSYLM 373


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,833,515
Number of Sequences: 53049
Number of extensions: 165611
Number of successful extensions: 241
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)