Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19c04
         (593 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118616-1|AAM49985.1|  254|Drosophila melanogaster LP10960p pro...    29   3.6  
AF077304-1|AAD03844.1|  254|Drosophila melanogaster antigen 5-re...    29   3.6  
AE014298-2051|AAF48386.1|  254|Drosophila melanogaster CG9540-PA...    29   3.6  
AY119211-1|AAM51071.1|  147|Drosophila melanogaster SD15892p pro...    28   8.3  
AE013599-1574|AAF58464.1|  535|Drosophila melanogaster CG12488-P...    28   8.3  

>AY118616-1|AAM49985.1|  254|Drosophila melanogaster LP10960p
           protein.
          Length = 254

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +3

Query: 183 HVSWNVWNGDIGDIAYVFFDEQQVWKGDADSKRATI 290
           +++W  ++GD+ D+ Y+  +  Q+W  +  +  A I
Sbjct: 126 NLAWQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGI 161


>AF077304-1|AAD03844.1|  254|Drosophila melanogaster antigen
           5-related 2 protein.
          Length = 254

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +3

Query: 183 HVSWNVWNGDIGDIAYVFFDEQQVWKGDADSKRATI 290
           +++W  ++GD+ D+ Y+  +  Q+W  +  +  A I
Sbjct: 126 NLAWQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGI 161


>AE014298-2051|AAF48386.1|  254|Drosophila melanogaster CG9540-PA
           protein.
          Length = 254

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +3

Query: 183 HVSWNVWNGDIGDIAYVFFDEQQVWKGDADSKRATI 290
           +++W  ++GD+ D+ Y+  +  Q+W  +  +  A I
Sbjct: 126 NLAWQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGI 161


>AY119211-1|AAM51071.1|  147|Drosophila melanogaster SD15892p
           protein.
          Length = 147

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 379 SQTPTAVIWRRSNTHGWK-TTNPAEERIKLS 468
           S  PTA  WRRSN  GWK  T+P    + +S
Sbjct: 30  STPPTASSWRRSN--GWKRVTSPVHPPVAVS 58


>AE013599-1574|AAF58464.1|  535|Drosophila melanogaster CG12488-PA
           protein.
          Length = 535

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 379 SQTPTAVIWRRSNTHGWK-TTNPAEERIKLS 468
           S  PTA  WRRSN  GWK  T+P    + +S
Sbjct: 418 STPPTASSWRRSN--GWKRVTSPVHPPVAVS 446


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,604,137
Number of Sequences: 53049
Number of extensions: 614974
Number of successful extensions: 2526
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2526
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)