Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19c01
(643 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17519-2|CAB43537.1| 363|Homo sapiens Leu-8 antigen short form ... 38 0.023
X17519-1|CAB43536.1| 385|Homo sapiens protein ( Human mRNA for ... 38 0.023
X16150-1|CAA34275.1| 372|Homo sapiens protein ( Human Lyam-1 mR... 38 0.023
X16070-1|CAA34203.1| 372|Homo sapiens pln homing receptor protein. 38 0.023
M32414-1|AAB60700.1| 372|Homo sapiens protein ( Human leukocyte... 38 0.023
M25280-1|AAC63053.1| 372|Homo sapiens LNHR protein. 38 0.023
BC020758-1|AAH20758.1| 375|Homo sapiens SELL protein protein. 38 0.023
AY233976-1|AAO48272.1| 372|Homo sapiens selectin L (lymphocyte ... 38 0.023
AL021940-1|CAI19356.1| 385|Homo sapiens selectin L (lymphocyte ... 38 0.023
AJ246000-1|CAB55488.1| 385|Homo sapiens L-selectin protein. 38 0.023
M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein. 32 1.5
J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein. 32 1.5
DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein. 32 1.5
BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C typ... 32 1.5
BC150212-1|AAI50213.1| 1479|Homo sapiens mannose receptor, C typ... 32 1.5
BC146647-1|AAI46648.1| 1479|Homo sapiens mannose receptor, C typ... 32 1.5
AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C typ... 32 1.5
AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C typ... 32 1.5
AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C typ... 32 1.5
AF134838-1|AAD30280.1| 1479|Homo sapiens endocytic receptor Endo... 32 1.5
AF107292-1|AAF14192.1| 1479|Homo sapiens urokinase receptor-asso... 32 1.5
AB014609-1|BAA31684.2| 1484|Homo sapiens KIAA0709 protein protein. 32 1.5
U28835-1|AAA70335.1| 203|Homo sapiens GATA-4 protein. 31 4.6
BC008301-1|AAH08301.1| 390|Homo sapiens tuftelin 1 protein. 30 6.1
BC002933-1|AAH02933.1| 365|Homo sapiens TUFT1 protein protein. 30 6.1
AL365436-6|CAI16592.1| 365|Homo sapiens tuftelin 1 protein. 30 6.1
AL365436-5|CAI16591.1| 390|Homo sapiens tuftelin 1 protein. 30 6.1
AL365436-4|CAO03532.1| 335|Homo sapiens tuftelin 1 protein. 30 6.1
AK223161-1|BAD96881.1| 390|Homo sapiens tuftelin 1 variant prot... 30 6.1
AK075001-1|BAC11346.1| 365|Homo sapiens protein ( Homo sapiens ... 30 6.1
AK026989-1|BAB15615.1| 152|Homo sapiens protein ( Homo sapiens ... 30 6.1
AF254860-1|AAF78914.1| 390|Homo sapiens tuftelin 1 protein. 30 6.1
AF254260-1|AAF78913.1| 390|Homo sapiens tuftelin 1 protein. 30 6.1
AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein. 30 6.1
AC005254-1|AAC25581.1| 315|Homo sapiens PGCN_HUMAN, PARTIAL CDS... 30 6.1
AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein p... 30 6.1
>X17519-2|CAB43537.1| 363|Homo sapiens Leu-8 antigen short form
protein.
Length = 363
Score = 38.3 bits (85), Expect = 0.023
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +3
Query: 231 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 410
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 62 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 105
Query: 411 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 587
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 106 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 150
Query: 588 DGVHWHDVACHHRKPFVC 641
D W+D ACH K +C
Sbjct: 151 DAGKWNDDACHKLKAALC 168
>X17519-1|CAB43536.1| 385|Homo sapiens protein ( Human mRNA for
Leu-8 pan leukocyte antigen. ).
Length = 385
Score = 38.3 bits (85), Expect = 0.023
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +3
Query: 231 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 410
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 62 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 105
Query: 411 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 587
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 106 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 150
Query: 588 DGVHWHDVACHHRKPFVC 641
D W+D ACH K +C
Sbjct: 151 DAGKWNDDACHKLKAALC 168
>X16150-1|CAA34275.1| 372|Homo sapiens protein ( Human Lyam-1 mRNA
for leukocyte adhesion molecule-1. ).
Length = 372
Score = 38.3 bits (85), Expect = 0.023
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +3
Query: 231 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 410
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 49 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 92
Query: 411 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 587
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 93 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 137
Query: 588 DGVHWHDVACHHRKPFVC 641
D W+D ACH K +C
Sbjct: 138 DAGKWNDDACHKLKAALC 155
>X16070-1|CAA34203.1| 372|Homo sapiens pln homing receptor protein.
Length = 372
Score = 38.3 bits (85), Expect = 0.023
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +3
Query: 231 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 410
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 49 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 92
Query: 411 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 587
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 93 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 137
Query: 588 DGVHWHDVACHHRKPFVC 641
D W+D ACH K +C
Sbjct: 138 DAGKWNDDACHKLKAALC 155
>M32414-1|AAB60700.1| 372|Homo sapiens protein ( Human leukocyte
adhesion molecule-1 (LAM-1), exon 9. ).
Length = 372
Score = 38.3 bits (85), Expect = 0.023
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +3
Query: 231 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 410
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 49 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 92
Query: 411 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 587
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 93 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 137
Query: 588 DGVHWHDVACHHRKPFVC 641
D W+D ACH K +C
Sbjct: 138 DAGKWNDDACHKLKAALC 155
>M25280-1|AAC63053.1| 372|Homo sapiens LNHR protein.
Length = 372
Score = 38.3 bits (85), Expect = 0.023
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +3
Query: 231 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 410
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 49 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 92
Query: 411 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 587
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 93 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 137
Query: 588 DGVHWHDVACHHRKPFVC 641
D W+D ACH K +C
Sbjct: 138 DAGKWNDDACHKLKAALC 155
>BC020758-1|AAH20758.1| 375|Homo sapiens SELL protein protein.
Length = 375
Score = 38.3 bits (85), Expect = 0.023
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +3
Query: 231 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 410
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 62 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 105
Query: 411 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 587
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 106 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 150
Query: 588 DGVHWHDVACHHRKPFVC 641
D W+D ACH K +C
Sbjct: 151 DAGKWNDDACHKLKAALC 168
>AY233976-1|AAO48272.1| 372|Homo sapiens selectin L (lymphocyte
adhesion molecule 1) protein.
Length = 372
Score = 38.3 bits (85), Expect = 0.023
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +3
Query: 231 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 410
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 49 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 92
Query: 411 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 587
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 93 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 137
Query: 588 DGVHWHDVACHHRKPFVC 641
D W+D ACH K +C
Sbjct: 138 DAGKWNDDACHKLKAALC 155
>AL021940-1|CAI19356.1| 385|Homo sapiens selectin L (lymphocyte
adhesion molecule 1) protein.
Length = 385
Score = 38.3 bits (85), Expect = 0.023
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +3
Query: 231 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 410
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 62 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 105
Query: 411 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 587
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 106 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 150
Query: 588 DGVHWHDVACHHRKPFVC 641
D W+D ACH K +C
Sbjct: 151 DAGKWNDDACHKLKAALC 168
>AJ246000-1|CAB55488.1| 385|Homo sapiens L-selectin protein.
Length = 385
Score = 38.3 bits (85), Expect = 0.023
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Frame = +3
Query: 231 DWLSARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPN 410
+W AR +CR DLV+++ E E+++ + + Y W R
Sbjct: 62 NWQRARRFCRDNYTDLVAIQNKAEIEYLEKTLPFSR-SYYWIGIR--------------- 105
Query: 411 EING-WFWTAELQKLAPTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYN 587
+I G W W + L T +N W +G +P+N++ E CV I
Sbjct: 106 KIGGIWTWVGTNKSL---TEEAEN-WGDG------EPNNKK-----NKEDCVEIYIKRNK 150
Query: 588 DGVHWHDVACHHRKPFVC 641
D W+D ACH K +C
Sbjct: 151 DAGKWNDDACHKLKAALC 168
>M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = +3
Query: 483 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVC 641
W++G G+ GK P R CV I+ N+ W D C ++ ++C
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYIC 1079
>J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein.
Length = 1456
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = +3
Query: 483 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVC 641
W++G G+ GK P R CV I+ N+ W D C ++ ++C
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYIC 1079
>DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = +3
Query: 483 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVC 641
W++G G+ GK P R CV I+ N+ W D C ++ ++C
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYIC 1079
>BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = +3
Query: 483 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVC 641
W++G G+ GK P R CV I+ N+ W D C ++ ++C
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYIC 1079
>BC150212-1|AAI50213.1| 1479|Homo sapiens mannose receptor, C type 2
protein.
Length = 1479
Score = 32.3 bits (70), Expect = 1.5
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Frame = +3
Query: 102 PNGRILEPP----VPSLCV------QRNIHERYADNKGYFFSWRDPALRGVEEDWLS--- 242
P GR + P +PS+C Q E + KG+ +W P+ + ED ++
Sbjct: 487 PEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGW--TWHSPSCYWLGEDQVTYSE 544
Query: 243 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPNEING 422
AR C LV++ E +V + I + +Y WT+ + DL N
Sbjct: 545 ARRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQ----------DL--NSTGS 592
Query: 423 WFWTAELQKLAPTTNRQQNDWSEGG 497
+FW + + + NR Q +S GG
Sbjct: 593 FFWLSGDEVMYTHWNRDQPGYSRGG 617
>BC146647-1|AAI46648.1| 1479|Homo sapiens mannose receptor, C type 2
protein.
Length = 1479
Score = 32.3 bits (70), Expect = 1.5
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Frame = +3
Query: 102 PNGRILEPP----VPSLCV------QRNIHERYADNKGYFFSWRDPALRGVEEDWLS--- 242
P GR + P +PS+C Q E + KG+ +W P+ + ED ++
Sbjct: 487 PEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGW--TWHSPSCYWLGEDQVTYSE 544
Query: 243 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPNEING 422
AR C LV++ E +V + I + +Y WT+ + DL N
Sbjct: 545 ARRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQ----------DL--NSTGS 592
Query: 423 WFWTAELQKLAPTTNRQQNDWSEGG 497
+FW + + + NR Q +S GG
Sbjct: 593 FFWLSGDEVMYTHWNRDQPGYSRGG 617
>AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C type 1
protein.
Length = 1456
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = +3
Query: 483 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVC 641
W++G G+ GK P R CV I+ N+ W D C ++ ++C
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYIC 1079
>AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = +3
Query: 483 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVC 641
W++G G+ GK P R CV I+ N+ W D C ++ ++C
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYIC 1079
>AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = +3
Query: 483 WSEGGGI-----GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVC 641
W++G G+ GK P R CV I+ N+ W D C ++ ++C
Sbjct: 1022 WTDGRGVHYTNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYIC 1079
>AF134838-1|AAD30280.1| 1479|Homo sapiens endocytic receptor Endo180
protein.
Length = 1479
Score = 32.3 bits (70), Expect = 1.5
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Frame = +3
Query: 102 PNGRILEPP----VPSLCV------QRNIHERYADNKGYFFSWRDPALRGVEEDWLS--- 242
P GR + P +PS+C Q E + KG+ +W P+ + ED ++
Sbjct: 487 PEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGW--TWHSPSCYWLGEDQVTYSE 544
Query: 243 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPNEING 422
AR C LV++ E +V + I + +Y WT+ + DL N
Sbjct: 545 ARRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQ----------DL--NSTGS 592
Query: 423 WFWTAELQKLAPTTNRQQNDWSEGG 497
+FW + + + NR Q +S GG
Sbjct: 593 FFWLSGDEVMYTHWNRDQPGYSRGG 617
>AF107292-1|AAF14192.1| 1479|Homo sapiens urokinase
receptor-associated protein uPARAP protein.
Length = 1479
Score = 32.3 bits (70), Expect = 1.5
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Frame = +3
Query: 102 PNGRILEPP----VPSLCV------QRNIHERYADNKGYFFSWRDPALRGVEEDWLS--- 242
P GR + P +PS+C Q E + KG+ +W P+ + ED ++
Sbjct: 487 PEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGW--TWHSPSCYWLGEDQVTYSE 544
Query: 243 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPNEING 422
AR C LV++ E +V + I + +Y WT+ + DL N
Sbjct: 545 ARRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQ----------DL--NSTGS 592
Query: 423 WFWTAELQKLAPTTNRQQNDWSEGG 497
+FW + + + NR Q +S GG
Sbjct: 593 FFWLSGDEVMYTHWNRDQPGYSRGG 617
>AB014609-1|BAA31684.2| 1484|Homo sapiens KIAA0709 protein protein.
Length = 1484
Score = 32.3 bits (70), Expect = 1.5
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Frame = +3
Query: 102 PNGRILEPP----VPSLCV------QRNIHERYADNKGYFFSWRDPALRGVEEDWLS--- 242
P GR + P +PS+C Q E + KG+ +W P+ + ED ++
Sbjct: 492 PEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGW--TWHSPSCYWLGEDQVTYSE 549
Query: 243 ARNYCRQRCMDLVSLETSDENEWVKARIVQDKIKYIWTSGRLCDFKGCNRPDLLPNEING 422
AR C LV++ E +V + I + +Y WT+ + DL N
Sbjct: 550 ARRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQ----------DL--NSTGS 597
Query: 423 WFWTAELQKLAPTTNRQQNDWSEGG 497
+FW + + + NR Q +S GG
Sbjct: 598 FFWLSGDEVMYTHWNRDQPGYSRGG 622
>U28835-1|AAA70335.1| 203|Homo sapiens GATA-4 protein.
Length = 203
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 11 RKPGSCTQRENEDIGTRIISCASGGGPGTV---PQWTYPGASGAFF 139
R+ G C +R +G ASG GPGT P W+ GA GA +
Sbjct: 56 RRRGLCVRRR---LGRSSGGAASGAGPGTQQGSPGWSQAGADGAAY 98
>BC008301-1|AAH08301.1| 390|Homo sapiens tuftelin 1 protein.
Length = 390
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 174 QRISHGCFSVHTKKAPEAPGYVHWGTVPGPPPLAQLIIRV 55
++ISHG FS + E PG + P P P+ +IRV
Sbjct: 350 KQISHGNFSTQARAKTENPGSIRISKPPSPKPMP--VIRV 387
>BC002933-1|AAH02933.1| 365|Homo sapiens TUFT1 protein protein.
Length = 365
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 174 QRISHGCFSVHTKKAPEAPGYVHWGTVPGPPPLAQLIIRV 55
++ISHG FS + E PG + P P P+ +IRV
Sbjct: 325 KQISHGNFSTQARAKTENPGSIRISKPPSPKPMP--VIRV 362
>AL365436-6|CAI16592.1| 365|Homo sapiens tuftelin 1 protein.
Length = 365
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 174 QRISHGCFSVHTKKAPEAPGYVHWGTVPGPPPLAQLIIRV 55
++ISHG FS + E PG + P P P+ +IRV
Sbjct: 325 KQISHGNFSTQARAKTENPGSIRISKPPSPKPMP--VIRV 362
>AL365436-5|CAI16591.1| 390|Homo sapiens tuftelin 1 protein.
Length = 390
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 174 QRISHGCFSVHTKKAPEAPGYVHWGTVPGPPPLAQLIIRV 55
++ISHG FS + E PG + P P P+ +IRV
Sbjct: 350 KQISHGNFSTQARAKTENPGSIRISKPPSPKPMP--VIRV 387
>AL365436-4|CAO03532.1| 335|Homo sapiens tuftelin 1 protein.
Length = 335
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 174 QRISHGCFSVHTKKAPEAPGYVHWGTVPGPPPLAQLIIRV 55
++ISHG FS + E PG + P P P+ +IRV
Sbjct: 295 KQISHGNFSTQARAKTENPGSIRISKPPSPKPMP--VIRV 332
>AK223161-1|BAD96881.1| 390|Homo sapiens tuftelin 1 variant
protein.
Length = 390
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 174 QRISHGCFSVHTKKAPEAPGYVHWGTVPGPPPLAQLIIRV 55
++ISHG FS + E PG + P P P+ +IRV
Sbjct: 350 KQISHGNFSTQARAKTENPGSIRISKPPSPKPMP--VIRV 387
>AK075001-1|BAC11346.1| 365|Homo sapiens protein ( Homo sapiens
cDNA FLJ90520 fis, clone NT2RP3004640, highly similar to
Bos taurus tuftelin mRNA. ).
Length = 365
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 174 QRISHGCFSVHTKKAPEAPGYVHWGTVPGPPPLAQLIIRV 55
++ISHG FS + E PG + P P P+ +IRV
Sbjct: 325 KQISHGNFSTQARAKTENPGSIRISKPPSPKPMP--VIRV 362
>AK026989-1|BAB15615.1| 152|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23336 fis, clone HEP12955. ).
Length = 152
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 174 QRISHGCFSVHTKKAPEAPGYVHWGTVPGPPPLAQLIIRV 55
++ISHG FS + E PG + P P P+ +IRV
Sbjct: 112 KQISHGNFSTQARAKTENPGSIRISKPPSPKPMP--VIRV 149
>AF254860-1|AAF78914.1| 390|Homo sapiens tuftelin 1 protein.
Length = 390
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 174 QRISHGCFSVHTKKAPEAPGYVHWGTVPGPPPLAQLIIRV 55
++ISHG FS + E PG + P P P+ +IRV
Sbjct: 350 KQISHGNFSTQARAKTENPGSIRISKPPSPKPMP--VIRV 387
>AF254260-1|AAF78913.1| 390|Homo sapiens tuftelin 1 protein.
Length = 390
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 174 QRISHGCFSVHTKKAPEAPGYVHWGTVPGPPPLAQLIIRV 55
++ISHG FS + E PG + P P P+ +IRV
Sbjct: 350 KQISHGNFSTQARAKTENPGSIRISKPPSPKPMP--VIRV 387
>AF026547-1|AAC80576.1| 1321|Homo sapiens neurocan protein.
Length = 1321
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 513 QPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVC 641
QPDN GG E CV ++ + + W+DV C++ P+VC
Sbjct: 1173 QPDN--FFAGG--EDCVVMVAH---ESGRWNDVPCNYNLPYVC 1208
>AC005254-1|AAC25581.1| 315|Homo sapiens PGCN_HUMAN, PARTIAL CDS
protein.
Length = 315
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 513 QPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVC 641
QPDN GG E CV ++ + + W+DV C++ P+VC
Sbjct: 167 QPDN--FFAGG--EDCVVMVAH---ESGRWNDVPCNYNLPYVC 202
>AB210004-1|BAE06086.1| 1335|Homo sapiens CSPG3 variant protein
protein.
Length = 1335
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 513 QPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVC 641
QPDN GG E CV ++ + + W+DV C++ P+VC
Sbjct: 1187 QPDN--FFAGG--EDCVVMVAH---ESGRWNDVPCNYNLPYVC 1222
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,452,260
Number of Sequences: 237096
Number of extensions: 2661510
Number of successful extensions: 7539
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 6932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7538
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -