Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19b24
(681 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 128 3e-30
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 126 1e-29
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 126 2e-29
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 125 3e-29
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 119 2e-27
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 108 3e-24
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 98 5e-21
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 82 5e-16
08_02_1528 + 27666356-27667081 29 4.5
07_03_1268 + 25328448-25328506,25328589-25328768,25328872-253289... 29 4.5
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 4.5
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 28 6.0
11_06_0284 + 21909758-21913645 28 7.9
03_01_0010 - 94931-96034,96117-96442,97154-97283 28 7.9
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 128 bits (310), Expect = 3e-30
Identities = 67/119 (56%), Positives = 87/119 (73%), Gaps = 4/119 (3%)
Frame = +1
Query: 337 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 510
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 511 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS 681
ARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSST 338
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 126 bits (305), Expect = 1e-29
Identities = 65/119 (54%), Positives = 88/119 (73%), Gaps = 4/119 (3%)
Frame = +1
Query: 337 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 510
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 511 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS 681
ARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSST 120
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 126 bits (304), Expect = 2e-29
Identities = 65/114 (57%), Positives = 85/114 (74%), Gaps = 4/114 (3%)
Frame = +1
Query: 352 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 525
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 526 WRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS 681
WR++SSIEQK E G+E + KEYR K+E EL +IC +L LLD HL+P ++
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSST 114
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 125 bits (302), Expect = 3e-29
Identities = 67/118 (56%), Positives = 84/118 (71%), Gaps = 4/118 (3%)
Frame = +1
Query: 340 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 513
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 514 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS 681
RR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSAT 119
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 119 bits (286), Expect = 2e-27
Identities = 63/115 (54%), Positives = 81/115 (70%), Gaps = 7/115 (6%)
Frame = +1
Query: 358 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 522
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 523 SWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS 681
SWR++SSIEQK E G+ A+ YR +VE EL IC +L LLD+ L+P A+
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAA 124
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 108 bits (260), Expect = 3e-24
Identities = 50/109 (45%), Positives = 73/109 (66%)
Frame = +1
Query: 355 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 534
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 535 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS 681
+ S+EQK ++ Y+ KVE ELR +C +VL ++ H +P A+
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLAN 111
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 98.3 bits (234), Expect = 5e-21
Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Frame = +1
Query: 448 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKEL 621
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 622 REICYDVLGLLDKHLIPKA 678
IC +L LLD HL+P A
Sbjct: 78 ARICDGILALLDSHLVPSA 96
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 81.8 bits (193), Expect = 5e-16
Identities = 40/84 (47%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +1
Query: 415 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 588
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 589 KEYRVKVEKELREICYDVLGLLDK 660
EYR KVE E+ +IC DV+ ++DK
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK 84
>08_02_1528 + 27666356-27667081
Length = 241
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +1
Query: 343 TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRS 522
T V K+ K A + + + E E + + +LLS K + + S
Sbjct: 130 TKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKITTSNSS 186
Query: 523 SWRVISSIEQKTE-GSERKQQMAKEYRV 603
W ++S QKT + +Q A E+ +
Sbjct: 187 KWSLVSKAFQKTRLACQEEQLQALEFAI 214
>07_03_1268 +
25328448-25328506,25328589-25328768,25328872-25328974,
25329095-25329119,25329587-25329614,25330603-25330755,
25331339-25333421,25333666-25334983,25335256-25335339,
25335756-25335769
Length = 1348
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 275 CLHSKTAGFNKSGISELVLF 334
C + +AGFN +SELVLF
Sbjct: 154 CARASSAGFNPDSVSELVLF 173
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Frame = +1
Query: 334 PSSTMSVDKEEL-VQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVG 510
P + D E++ ++ K AE ER + KE ++ SNEE L +KN
Sbjct: 327 PHYRVEEDGEKIKLEEIKGAESVERINFEERITKEEKNEAMKSSNEEVVSLVTGWKN--- 383
Query: 511 ARRSSWRV-ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLD 657
R W V + ++ T K+ AK + + +LR +LG +D
Sbjct: 384 -RIEEWDVDVDENDKDTRKLTPKRDPAKVDKAEKYTDLRSPICCILGHVD 432
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +1
Query: 352 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 513
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 514 RRSSWRVISSIEQKTEGSERKQQMAKEYRVK 606
+RSS K S+ Q + KE + K
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK 340
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/88 (22%), Positives = 41/88 (46%)
Frame = +1
Query: 364 ELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISS 543
+L + + E+ + ++ ++E+T+ G E EE+N G + +
Sbjct: 403 KLKRHMEADEKTKEFNKQIGVVEEITKQGGERKEEEKNEGEEENGEEEG-KEKELKGRKD 461
Query: 544 IEQKTEGSERKQQMAKEYRVKVEKELRE 627
E+K +G R+++ +E+ K EKE E
Sbjct: 462 KEKKEKGG-REERKEEEHHEKQEKEKEE 488
>03_01_0010 - 94931-96034,96117-96442,97154-97283
Length = 519
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 307 FIETRCLGVQTLFLFYFKPST 245
F+ CL V TLF+F+F P T
Sbjct: 456 FLFAACLCVMTLFVFFFLPET 476
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,514,187
Number of Sequences: 37544
Number of extensions: 350637
Number of successful extensions: 977
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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