Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19b23
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 29 2.4
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 29 2.4
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 29 3.2
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 3.2
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 3.2
Z83102-11|CAB05470.1| 310|Caenorhabditis elegans Hypothetical p... 28 7.3
Z81492-11|CAB04035.1| 310|Caenorhabditis elegans Hypothetical p... 28 7.3
Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical pr... 27 9.7
AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical ... 27 9.7
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 35.5 bits (78), Expect = 0.037
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 58 RENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSN---IKPPTRISLPTRTFSA-N 225
+E + PK + S+P P SP P+ PP ++ + PP LPTR SA N
Sbjct: 518 KEETEEEQPKEENNSTLPSIPIPSIFSPYEPIVPPPATSPDPMNPPIASLLPTRILSATN 577
Query: 226 PLE 234
LE
Sbjct: 578 VLE 580
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 79 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLE 234
+PK GR +S PTP NS +PV K+ IK +S P + P+E
Sbjct: 1498 SPKKRVSGR-RSAPTPTKNSKKAPVSPKKKTLIKETNGVS-PKKNKYGLPME 1547
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 79 APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLE 234
+PK GR +S PTP NS +PV K+ IK +S P + P+E
Sbjct: 1498 SPKKRVSGR-RSAPTPTKNSKKAPVSPKKKTLIKETNGVS-PKKNKYGLPME 1547
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 97 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 210
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 97 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 210
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 97 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 210
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 97 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 210
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 97 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 210
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 97 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 210
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 97 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 210
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 97 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 210
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 97 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 210
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 58 RENNIFDAPKTGGKGRVKSLPTPVANSPLSP--VRQPPKSNIKPPT 189
+E + + PK K V ++ + +P S V PP+ NI PPT
Sbjct: 170 KEEKVKEDPKKDDKSGVDTIKKEGSTAPASTALVPPPPRQNIPPPT 215
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 97 KGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 210
KGRV + P + P QPP+ PP R S TR
Sbjct: 350 KGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTR 387
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 97 KGRVKSLPTPVANSPL-SPVR--QPPKSNIKPPT 189
+ R K P V +PL +P+R QPP NIKP T
Sbjct: 384 RNRKKEKPKVVRKAPLRAPIRPRQPPNQNIKPIT 417
>Z83102-11|CAB05470.1| 310|Caenorhabditis elegans Hypothetical
protein E03H4.13 protein.
Length = 310
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 568 NCK-WCIANRSCAAP*SFCILQNCLQICPSCAYLYCL 461
NCK +C AN SC IL + Q C SC Y C+
Sbjct: 38 NCKFYCPANNSCT------ILDDQKQFCRSCRYNKCV 68
>Z81492-11|CAB04035.1| 310|Caenorhabditis elegans Hypothetical
protein E03H4.13 protein.
Length = 310
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 568 NCK-WCIANRSCAAP*SFCILQNCLQICPSCAYLYCL 461
NCK +C AN SC IL + Q C SC Y C+
Sbjct: 38 NCKFYCPANNSCT------ILDDQKQFCRSCRYNKCV 68
>Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical
protein R04D3.6 protein.
Length = 322
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 53 FFERITFLTRQRPVARAVSNLCQRLSPTRRCRLFVSRQNLTS 178
FF +I F+T ++P+ LC+ P C F + LT+
Sbjct: 62 FFTQIRFITTKKPIEMWSYGLCKHFEPW-ICYCFYQAEQLTA 102
>AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical
protein Y61B8A.2 protein.
Length = 356
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 59 ERITFLTRQRPVARAVSNLCQRLSPTRRCRLFVSRQNLTSNHLRASLCLRALF 217
E I +T RP +AVS + RR V +NH+R S+ +R F
Sbjct: 307 ESIAIVTVHRPYRKAVSQMATEFKRRRRA---VQVLPFLANHMRHSVTMRQSF 356
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,245,038
Number of Sequences: 27780
Number of extensions: 352571
Number of successful extensions: 1248
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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