Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19b22
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   2.1  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   2.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.4  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 585 DQQTDGQIHRQHHE 626
           +QQT   IH+ HH+
Sbjct: 97  EQQTHSSIHQHHHD 110


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 585 DQQTDGQIHRQHHE 626
           +QQT   IH+ HH+
Sbjct: 248 EQQTHSSIHQHHHD 261


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 585 DQQTDGQIHRQHHE 626
           +QQT   IH+ HH+
Sbjct: 307 EQQTHSSIHQHHHD 320


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 249 RRIPNNYRWIFRFNHDYIFVI 187
           +RIP++YR  FR    Y+ ++
Sbjct: 233 KRIPHDYRKRFRMEKIYVALV 253


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 403 GEHRDRVYTDVENLSIKMDGQTV 471
           G+H + +  + ENLS K +  TV
Sbjct: 20  GDHSENMQDEPENLSNKSNSITV 42


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 246 RIPNNYRWI 220
           R PNNY W+
Sbjct: 517 RCPNNYPWV 525


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,378
Number of Sequences: 336
Number of extensions: 2421
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)