Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19b20
         (622 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14823-1|CAA75100.1|  270|Drosophila melanogaster SURF-4 protein...   258   3e-69
AY118406-1|AAM48435.1|  270|Drosophila melanogaster RE62265p pro...   258   3e-69
AE014297-2017|AAN13656.1|  270|Drosophila melanogaster CG6202-PB...   258   3e-69
AE014297-2016|AAF55176.1|  270|Drosophila melanogaster CG6202-PA...   258   3e-69
AY121716-1|AAM52043.1|   90|Drosophila melanogaster SD25037p pro...    30   2.9  
AY122074-1|AAM52586.1|  994|Drosophila melanogaster AT16994p pro...    29   6.7  
AE013599-641|AAF59100.3|  994|Drosophila melanogaster CG11641-PA...    29   6.7  
AY070922-1|AAL48544.1|  333|Drosophila melanogaster RE02884p pro...    28   8.9  

>Y14823-1|CAA75100.1|  270|Drosophila melanogaster SURF-4 protein
           protein.
          Length = 270

 Score =  258 bits (633), Expect = 3e-69
 Identities = 121/174 (69%), Positives = 138/174 (79%)
 Frame = +1

Query: 100 MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSW 279
           M IPNEY++  EDVA+QVI++GKNVLPTVARLCLI+TF EDGLRM+ QW+EQR+YMDMSW
Sbjct: 1   MSIPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSW 60

Query: 280 GCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXX 459
           GCGKFLAT+FV+VNL GQLGGC MV+ R KVDIA G+LFFIVVLQT AYSILWD QF   
Sbjct: 61  GCGKFLATVFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFLLR 120

Query: 460 XXXXXXXXXXXXXXXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLL 621
                               SLFAGVPS+GENKPK ++QLAGRILLAFMFITL+
Sbjct: 121 NFALIGALLLVLAEARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLI 174


>AY118406-1|AAM48435.1|  270|Drosophila melanogaster RE62265p
           protein.
          Length = 270

 Score =  258 bits (633), Expect = 3e-69
 Identities = 121/174 (69%), Positives = 138/174 (79%)
 Frame = +1

Query: 100 MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSW 279
           M IPNEY++  EDVA+QVI++GKNVLPTVARLCLI+TF EDGLRM+ QW+EQR+YMDMSW
Sbjct: 1   MSIPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSW 60

Query: 280 GCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXX 459
           GCGKFLAT+FV+VNL GQLGGC MV+ R KVDIA G+LFFIVVLQT AYSILWD QF   
Sbjct: 61  GCGKFLATVFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFLLR 120

Query: 460 XXXXXXXXXXXXXXXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLL 621
                               SLFAGVPS+GENKPK ++QLAGRILLAFMFITL+
Sbjct: 121 NFALIGALLLVLAEARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLI 174


>AE014297-2017|AAN13656.1|  270|Drosophila melanogaster CG6202-PB,
           isoform B protein.
          Length = 270

 Score =  258 bits (633), Expect = 3e-69
 Identities = 121/174 (69%), Positives = 138/174 (79%)
 Frame = +1

Query: 100 MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSW 279
           M IPNEY++  EDVA+QVI++GKNVLPTVARLCLI+TF EDGLRM+ QW+EQR+YMDMSW
Sbjct: 1   MSIPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSW 60

Query: 280 GCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXX 459
           GCGKFLAT+FV+VNL GQLGGC MV+ R KVDIA G+LFFIVVLQT AYSILWD QF   
Sbjct: 61  GCGKFLATVFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFLLR 120

Query: 460 XXXXXXXXXXXXXXXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLL 621
                               SLFAGVPS+GENKPK ++QLAGRILLAFMFITL+
Sbjct: 121 NFALIGALLLVLAEARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLI 174


>AE014297-2016|AAF55176.1|  270|Drosophila melanogaster CG6202-PA,
           isoform A protein.
          Length = 270

 Score =  258 bits (633), Expect = 3e-69
 Identities = 121/174 (69%), Positives = 138/174 (79%)
 Frame = +1

Query: 100 MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSW 279
           M IPNEY++  EDVA+QVI++GKNVLPTVARLCLI+TF EDGLRM+ QW+EQR+YMDMSW
Sbjct: 1   MSIPNEYIAKTEDVAEQVIKRGKNVLPTVARLCLIATFFEDGLRMYIQWNEQREYMDMSW 60

Query: 280 GCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFXXX 459
           GCGKFLAT+FV+VNL GQLGGC MV+ R KVDIA G+LFFIVVLQT AYSILWD QF   
Sbjct: 61  GCGKFLATVFVLVNLLGQLGGCGMVMARFKVDIAVGLLFFIVVLQTVAYSILWDFQFLLR 120

Query: 460 XXXXXXXXXXXXXXXXXXXXSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLL 621
                               SLFAGVPS+GENKPK ++QLAGRILLAFMFITL+
Sbjct: 121 NFALIGALLLVLAEARIEGRSLFAGVPSMGENKPKNFMQLAGRILLAFMFITLI 174


>AY121716-1|AAM52043.1|   90|Drosophila melanogaster SD25037p
           protein.
          Length = 90

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = -1

Query: 292 ICRSPRTCPCSLS--ALTTGTTCGDRPPGMWI 203
           ICR+PR  PC        TG  CG   P  W+
Sbjct: 44  ICRTPRRSPCCPDPYRTATGRPCGPEIPAGWV 75


>AY122074-1|AAM52586.1|  994|Drosophila melanogaster AT16994p
           protein.
          Length = 994

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 618 ERDEHEGQ*DATGELQVRLRFVLSERRHAREQTAPFSASLRQHQQ 484
           E DE+EG+ +  GE + +   V+  RR  + Q   F+A L    Q
Sbjct: 68  EEDENEGEGEGEGEAEEQSAEVMRLRREEQAQAKAFAAHLNGTMQ 112


>AE013599-641|AAF59100.3|  994|Drosophila melanogaster CG11641-PA
           protein.
          Length = 994

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 618 ERDEHEGQ*DATGELQVRLRFVLSERRHAREQTAPFSASLRQHQQ 484
           E DE+EG+ +  GE + +   V+  RR  + Q   F+A L    Q
Sbjct: 68  EEDENEGEGEGEGEAEEQSAEVMRLRREEQAQAKAFAAHLNGTMQ 112


>AY070922-1|AAL48544.1|  333|Drosophila melanogaster RE02884p
           protein.
          Length = 333

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 413 RHSRTVYYGTYSSFSAIWH*SERY 484
           R  RT++YG + +F  +WH +E +
Sbjct: 161 RMKRTIFYGLHQTFINLWHKNELF 184


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,303,750
Number of Sequences: 53049
Number of extensions: 657384
Number of successful extensions: 2066
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2056
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)