Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19b18
         (396 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.63 
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   3.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   3.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    20   7.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    20   7.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    20   7.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 0.63
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 183 VTVVSPNPSSKRRQKPLRKLCSVLSVQIAR*DHRLH*RD 299
           V +VS   ++ R+  PL+KLC+  + +     HR H  D
Sbjct: 136 VEMVSCKDAALRKVVPLKKLCNNGTCEDIGNSHRCHCSD 174


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 12/42 (28%), Positives = 15/42 (35%)
 Frame = +2

Query: 32  TNSKMVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQGR 157
           T  K++    Q+R               QYKK  E H A  R
Sbjct: 84  TAEKVIRHLTQKRARDWERLSKKYDPQGQYKKRYEEHVATSR 125


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -1

Query: 348 IICPFLFLSPPSSKCLHLFNATCDLTLQSAHSRRSTI 238
           ++C  L L PP+ +   L N    +     H R  T+
Sbjct: 334 VVCESLRLWPPAPQTDRLCNKNFVIEASKPHERTFTV 370


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +3

Query: 171 VNSRVTVVSPNPSSKRRQKPLRKLCSVLSVQIAR*DHRLH*RDASTLSSVVTRRER 338
           +NS V  +  N  S + +    KLC +  V+  R D R   R  ST SS  T  ++
Sbjct: 344 INSAVNPILYNIISSKFRSGFFKLCGMKIVKKRRKDKREITR-KSTSSSTHTSSQQ 398


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 335 FSSCHHRAQSACISSMQPVISPCNL 261
           + + HH       +SM+PV + C L
Sbjct: 10  YFTTHHDTLHNIYTSMKPVYAICKL 34


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 335 FSSCHHRAQSACISSMQPVISPCNL 261
           + + HH       +SM+PV + C L
Sbjct: 10  YFTTHHDTLHNIYTSMKPVYAICKL 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,758
Number of Sequences: 336
Number of extensions: 1848
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)