Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19b16
(704 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51866| Best HMM Match : Pkinase (HMM E-Value=0) 66 2e-11
SB_5853| Best HMM Match : Pkinase (HMM E-Value=3.6e-05) 53 3e-07
SB_45091| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_23777| Best HMM Match : Pkinase (HMM E-Value=0.065) 41 0.001
SB_17071| Best HMM Match : Pkinase (HMM E-Value=0.065) 41 0.001
SB_51685| Best HMM Match : Pkinase (HMM E-Value=0) 39 0.003
SB_20713| Best HMM Match : Pkinase (HMM E-Value=0) 38 0.008
SB_3739| Best HMM Match : Pkinase (HMM E-Value=0) 36 0.024
SB_45| Best HMM Match : Pkinase (HMM E-Value=0) 36 0.032
SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39) 35 0.056
SB_34303| Best HMM Match : Pkinase (HMM E-Value=0) 35 0.056
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 35 0.074
SB_48312| Best HMM Match : OAR (HMM E-Value=2.8) 33 0.17
SB_24054| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_19211| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_26967| Best HMM Match : Pkinase (HMM E-Value=0) 33 0.30
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 32 0.52
SB_25818| Best HMM Match : Pkinase (HMM E-Value=1.7e-20) 32 0.52
SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3) 31 1.2
SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_22883| Best HMM Match : Pkinase (HMM E-Value=6.4e-12) 30 2.1
SB_50958| Best HMM Match : Hc1 (HMM E-Value=3.7) 30 2.1
SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091) 30 2.1
SB_7620| Best HMM Match : Remorin_N (HMM E-Value=5.2) 29 2.8
SB_33752| Best HMM Match : I-set (HMM E-Value=3.7e-15) 29 3.7
SB_11825| Best HMM Match : Pkinase (HMM E-Value=1.2e-17) 29 3.7
SB_2079| Best HMM Match : Pkinase (HMM E-Value=4.2e-10) 29 3.7
SB_19785| Best HMM Match : SRR1 (HMM E-Value=8.8e-19) 29 4.9
SB_6028| Best HMM Match : LIM (HMM E-Value=0.22) 29 4.9
SB_44532| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_38533| Best HMM Match : Pkinase (HMM E-Value=0.15) 28 6.4
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 28 8.5
SB_51277| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_10877| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_51866| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 948
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/63 (47%), Positives = 43/63 (68%)
Frame = +3
Query: 516 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDI 695
IG GA+GVV + D R G +VA+KK+ F L +++R RELK+L FKH+N++ DI
Sbjct: 29 IGNGAYGVVCSAMDTRTGAKVAVKKISRAFDVLTTARRTHRELKILRHFKHDNIICIRDI 88
Query: 696 LQP 704
L+P
Sbjct: 89 LKP 91
>SB_5853| Best HMM Match : Pkinase (HMM E-Value=3.6e-05)
Length = 229
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Frame = +3
Query: 486 IPTDVQPDRPIGYGAFGVVWAVT----DPR--DG-RRVALKKLPNVFQSLVSSKRVFREL 644
+P Q PIG GA+G V + T DP DG VA+KKL FQS + +KR +REL
Sbjct: 20 VPRKYQELSPIGTGAYGQVCSSTITEPDPTNPDGPNTVAIKKLSRPFQSTMHAKRTYREL 79
Query: 645 KMLCFFKHENVLSALDIL 698
K+L +HEN + + ++
Sbjct: 80 KLLRHMRHENYIHSAGVI 97
>SB_45091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 546 AVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDILQP 704
A D G +VA+KKL FQ++ +KR FREL ++ H+N++ L++ P
Sbjct: 2 AAIDTVTGEKVAIKKLSRPFQNVTHAKRAFRELVLMRMVNHKNIIGLLNVFTP 54
>SB_23777| Best HMM Match : Pkinase (HMM E-Value=0.065)
Length = 97
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +3
Query: 516 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDI 695
IG G++GVV+ G+ VA+KK + K RE+KML KH N+++ L++
Sbjct: 10 IGEGSYGVVFKCRHKETGQIVAIKKFVESEDDPLIKKIAMREVKMLKQLKHPNLVNLLEV 69
Query: 696 LQ 701
+
Sbjct: 70 FK 71
>SB_17071| Best HMM Match : Pkinase (HMM E-Value=0.065)
Length = 97
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +3
Query: 516 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDI 695
IG G++GVV+ G+ VA+KK + K RE+KML KH N+++ L++
Sbjct: 10 IGEGSYGVVFKCRHKETGQIVAIKKFVESEDDPLIKKIAMREVKMLKQLKHPNLVNLLEV 69
Query: 696 LQ 701
+
Sbjct: 70 FK 71
>SB_51685| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 380
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +3
Query: 516 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDI 695
IG G +G+V+ D + G+ VALKK+ + RE+ +L +HEN++ L++
Sbjct: 42 IGEGTYGIVYRAKDTKSGKIVALKKVRMEQERDGIPISGLREITLLLNLRHENIVQLLEV 101
Query: 696 L 698
+
Sbjct: 102 V 102
>SB_20713| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 492
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +3
Query: 516 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDI 695
IG G G V++ D + RRVALK++ N+ Q S + R++++ +HEN++ L+I
Sbjct: 20 IGTGGSGAVYSGIDSKTDRRVALKRV-NI-QDQSSCRTTLRQIEVQRNLEHENIVKLLNI 77
Query: 696 L 698
+
Sbjct: 78 V 78
>SB_3739| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 490
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +3
Query: 474 QSPAIPTDVQPDRPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKML 653
QS P ++ IG G+ G+V TD R GR+VA+KK+ + + +F E+ ++
Sbjct: 210 QSTRQPENLGNFMKIGEGSTGIVCLATDKRTGRQVAVKKMD--LKKQQRRELLFNEVVIM 267
Query: 654 CFFKHENVL 680
+ H N++
Sbjct: 268 RDYPHPNIV 276
>SB_45| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 851
Score = 35.9 bits (79), Expect = 0.032
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3
Query: 513 PIGYGAFGVVWAVTDPRDGRRVALKKL 593
PIG G+FG V+A D +DGR VA+K++
Sbjct: 477 PIGTGSFGCVFAGLDLKDGREVAIKRI 503
>SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39)
Length = 1123
Score = 35.1 bits (77), Expect = 0.056
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +3
Query: 516 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSALDI 695
IG G FG W V + R ALK+L E+K+L KH N++ D
Sbjct: 10 IGKGTFGSAWLVESRQSKRLYALKELNATAMPSEDRHLALNEVKILSTLKHRNIVRYRDA 69
Query: 696 LQ 701
+
Sbjct: 70 FE 71
>SB_34303| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 226
Score = 35.1 bits (77), Expect = 0.056
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +3
Query: 516 IGYGAFGVVWAVTDP-RDGRRVALKK--LPNVFQSL-VSSKRVFRELKMLCFFKHENVLS 683
IG GA+G V+ D DG+ VALK+ + N + + +S+ R LK + F H NV+
Sbjct: 11 IGTGAYGTVYKAKDLLNDGKFVALKRVRIQNSEEGMPLSTIREIALLKQIDNFAHPNVVR 70
Query: 684 ALDI 695
LDI
Sbjct: 71 LLDI 74
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 34.7 bits (76), Expect = 0.074
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +3
Query: 510 RPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVLSAL 689
+ IG G F V G+ VA+K + + S +++FRE++++ F H N++
Sbjct: 87 KTIGKGNFAKVKLAKHVPTGKEVAIKIIDKTQLNPSSLQKLFREVRIMKFLDHPNIVKLY 146
Query: 690 DILQ 701
++++
Sbjct: 147 EVIE 150
>SB_48312| Best HMM Match : OAR (HMM E-Value=2.8)
Length = 87
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 480 AIDSRAPLPPGWRPGAHSAYCPASGTSTHSWK 385
AI +R L P WRP S++ SG ST W+
Sbjct: 45 AIRARHGLAPRWRPNTRSSFSRPSGPSTRRWR 76
>SB_24054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 516 IGYGAFGVVWAVTDPRDGRRVALKKLP--NV-FQSLVSSKRVFRELKMLCFFKHENVLSA 686
IG G F +V+A T RDG+ VA+K +P NV F V V E+ + H NV+
Sbjct: 146 IGRGGFAMVYAGTRVRDGKPVAIKVIPKNNVYFFEEVEGISVPMEVYLHRVLDHPNVVRL 205
Query: 687 LDILQ 701
D +
Sbjct: 206 YDYFE 210
>SB_19211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 480 AIDSRAPLPPGWRPGAHSAYCPASGTSTHSWK 385
AI +R L P WRP S++ SG ST W+
Sbjct: 182 AIRARHGLAPRWRPNTRSSFSRPSGPSTRRWR 213
>SB_26967| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 428
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 516 IGYGAFGVVWAVTDPRDGRRVALKKLP-NVFQSLVSSKRVFRELKMLCFFKHENVLSALD 692
+G G FG V G +VA+K L N +SL ++ RE++ L F+H +++
Sbjct: 26 LGVGTFGKVKLAVHQLTGHKVAIKILNRNKIKSLDVVGKIRREIQNLKLFRHPHIIKLYQ 85
Query: 693 IL 698
++
Sbjct: 86 VI 87
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -3
Query: 552 SQPIQRRRHHSRWAGQAEHQSE*PAIDSRAPLPPGWRPGAHSAYCPASGTSTHSWKRES 376
S P++RR H + H++ ++ +R P PP ++ +HS+ P S T W+R+S
Sbjct: 1829 SPPVRRRAHTNA------HKNNPHSLRARTP-PPSFQKASHSSGTPRSQTPPVRWRRKS 1880
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = -1
Query: 533 EGTIADGPVR-LNISRNS--RRLIVGRRCRQDGALGRTLRTALHQGHRHTHGNARVPRGT 363
EGT G V +++ + + ++ +GR R G RT+R+ H HRH ++
Sbjct: 696 EGTATQGTVENVDVVKEAFDKKTNIGRDARVHGN-DRTIRSVTHSSHRHKPAGMKIYSSN 754
Query: 362 ANCRH 348
A+ RH
Sbjct: 755 ADKRH 759
>SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 1258
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 525 GAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENVL 680
GA+GVV + VA+KK + + + RELK+L K EN++
Sbjct: 29 GAYGVVMKCRHKENNEVVAIKKFKDSEDNEDVKRTTLRELKVLRMLKQENIV 80
>SB_25818| Best HMM Match : Pkinase (HMM E-Value=1.7e-20)
Length = 956
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 480 PAIPTDVQPDRPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCF 659
P D + IGYGA VV A RVA+K++ ++ + S + +E+ +
Sbjct: 691 PNTKDDYKLQEVIGYGATAVVQAAICESKNERVAIKRI-DLEKCGASIDEMMKEIHAMSQ 749
Query: 660 FKHENVLS 683
HENV++
Sbjct: 750 CNHENVVN 757
>SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3)
Length = 660
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = -3
Query: 453 PGWRPGAHSAYCPASGTSTHSWKRESAARDR*LPPSNRSAARCHRRLIRRTTASTLTLSP 274
PG R S P S TST + S R P S+R+++R +TT +T S
Sbjct: 553 PGMRSSVGSITPPPSRTSTPRSRAGSRTRTPPTPTSSRASSRGSAGGGAKTTKTTKKCST 612
Query: 273 ELDSRGKRGNIT 238
SRG+ G+ T
Sbjct: 613 R-KSRGQNGDTT 623
>SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +3
Query: 498 VQPDRPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHENV 677
V PD +G G FG+V+ + GR VA+K + + ++ E+ +L H +
Sbjct: 524 VFPDEILGSGQFGIVYGGVHRQSGREVAVKVIDKLRFPTKQEAQLKNEVAILKQLNHPGM 583
Query: 678 LS 683
++
Sbjct: 584 VT 585
>SB_22883| Best HMM Match : Pkinase (HMM E-Value=6.4e-12)
Length = 326
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +3
Query: 516 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSS--KRVFRELKMLCFFKHENVLSAL 689
+G G++G V + D + RR A+K L + + + V RE+++L H+NV+
Sbjct: 76 LGEGSYGKVKEMLDCENLRRCAVKILKKRRLRRIPNGEQNVKREIRLLKRLNHKNVIQLY 135
Query: 690 DIL 698
D++
Sbjct: 136 DVI 138
>SB_50958| Best HMM Match : Hc1 (HMM E-Value=3.7)
Length = 363
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -3
Query: 513 AGQAEHQSE*PAIDSRAPLP-PGWRPGAHSAYCPASGTSTHSWKRESAARDR*LPPSNRS 337
AG+ E PA AP+P PG A S+ PAS ST S ++ +PP S
Sbjct: 65 AGKPVDYEELPAPPGFAPIPVPGHGGAAASSQVPASPASTSSTSSQAQGLKVQIPPPQAS 124
>SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091)
Length = 761
Score = 29.9 bits (64), Expect = 2.1
Identities = 38/138 (27%), Positives = 57/138 (41%), Gaps = 13/138 (9%)
Frame = -3
Query: 624 LRRQATGIRSAVS*APPAGH---REGPSQPIQRRRHHSRWAGQAEHQSE*PAIDSRAPLP 454
+R Q S S +GH + S+ ++ R H R ++H+SE +I++ P
Sbjct: 338 VRMQEVSPSSETSRRTVSGHSAKEDRTSKKRKKARKHKRKRKHSKHKSEKQSIENGRPTR 397
Query: 453 PGWRPGAHSAYCPASGTSTHSWKR---ESAARDR*LPPSN-------RSAARCHRRLIRR 304
+PG S T + S R S AR R + RS +R H R R
Sbjct: 398 T--QPGGSLNSSSRSRTKSRSRSRIRSRSPARSRSWSHTRSRSRSHTRSRSRSHTRSRSR 455
Query: 303 TTASTLTLSPELDSRGKR 250
+ + + S ELDSR R
Sbjct: 456 SRIRSRSRSQELDSRTLR 473
>SB_7620| Best HMM Match : Remorin_N (HMM E-Value=5.2)
Length = 330
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -3
Query: 504 AEHQSE*PAIDSRAPLPPGWRPGAHSAYCPASGTSTHSWKRESAA 370
A H E P ID+R P +RPG SGT H+ +RES A
Sbjct: 262 AFHLHEVPEIDARDAPYPRFRPGTAKGVSWRSGT-RHTPRRESVA 305
>SB_33752| Best HMM Match : I-set (HMM E-Value=3.7e-15)
Length = 783
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 525 GAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKR--VFRELKMLCFFKHENVLSALD 692
G FGVV VTD + G A K + +L S R V RE+ ++ H+ ++ LD
Sbjct: 7 GKFGVVKRVTDKKTGTVYAAKYI-KTSGALSGSSRDDVMREIDIMSRMHHKRLVGLLD 63
>SB_11825| Best HMM Match : Pkinase (HMM E-Value=1.2e-17)
Length = 181
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 525 GAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKR--VFRELKMLCFFKHENVLSALD 692
G FGVV VTD + G A K + +L S R V RE+ ++ H+ ++ LD
Sbjct: 7 GKFGVVKRVTDKKTGTVYAAKYI-KTSGALSGSSRDDVMREIDIMSRMHHKRLVGLLD 63
>SB_2079| Best HMM Match : Pkinase (HMM E-Value=4.2e-10)
Length = 210
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 507 DRPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKR--VFRELKMLCFFKHENVL 680
++ IG G F VV+ + + VALKK+ +F + + R +E+ +L H NV+
Sbjct: 28 EKKIGRGQFSVVYKARCTANNQIVALKKI-QIFDMMDAKARQDCIKEIDLLKQLNHPNVI 86
>SB_19785| Best HMM Match : SRR1 (HMM E-Value=8.8e-19)
Length = 735
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 489 PTDVQPD-RPIGYGAFGVVWAVTDPRDGRRVALKKL 593
P + D R IG+G+FG V+ + R VA+KK+
Sbjct: 458 PEKIYADLREIGHGSFGAVYYARNVRTNEVVAIKKM 493
>SB_6028| Best HMM Match : LIM (HMM E-Value=0.22)
Length = 968
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = -1
Query: 581 RHPPAIARVRHSPYNAEGTIADGPVRLNISRNSRRLIVGRRCRQDGALGRTLRTALH 411
RH I RV P N G +A ++ +S + R D GRT T LH
Sbjct: 813 RHANQIVRVIPPPDNTPGALAPTELQATLSEELITARIKRYAVDDRQKGRTKYTGLH 869
>SB_44532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 516 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHE-NVLSALD 692
IG G +GVV+ + + G ALKK+ + RE+ +L +H NV+
Sbjct: 117 IGEGTYGVVYKAKNLKTGGFAALKKIRLEVEDEGIPSTAVREISLLKELRHHPNVVELQH 176
Query: 693 IL 698
IL
Sbjct: 177 IL 178
>SB_38533| Best HMM Match : Pkinase (HMM E-Value=0.15)
Length = 116
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 516 IGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKMLCFFKHE-NVLSALD 692
IG G +GVV+ + + G ALKK+ + RE+ +L +H NV+
Sbjct: 21 IGEGTYGVVYKAKNLKTGGFAALKKIRLEVEDEGIPSTAVREISLLKELRHHPNVVELQH 80
Query: 693 IL 698
IL
Sbjct: 81 IL 82
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 510 RPIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKM 650
R +G G F V+ VTD + ALK +P + L S + +R+++M
Sbjct: 436 RLLGKGGFARVYEVTDMSTNKIYALKVVPK--KRLSKSTKEYRKIEM 480
>SB_51277| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -1
Query: 581 RHPPAIARVRHSPYNAEGTIADGPVRLNISRNSRRLIVGRRCRQDGALGRTLRTALH 411
RHP I RV P NA GT+A ++ S + R D GRT T H
Sbjct: 121 RHPDQIVRVI-PPDNAPGTLAPTELQATPSEEFITARIKRYAVDDREKGRTKYTGSH 176
>SB_10877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 468 RAPLPPGWRPGAHSAYCPASGTSTH 394
+AP PG+ PG Y P+SG +H
Sbjct: 404 KAPRSPGFTPGKSRFYEPSSGDPSH 428
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,965,277
Number of Sequences: 59808
Number of extensions: 467755
Number of successful extensions: 1690
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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