Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19b16
(704 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 23 2.1
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 4.9
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 4.9
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 4.9
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 22 4.9
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 6.5
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 6.5
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 6.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 8.6
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 8.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 8.6
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 676 TFSCLKKQSILSSRKTRF 623
TF CL++ + + SR TRF
Sbjct: 370 TFRCLEENNKIDSRVTRF 387
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 108 LMSLALTSFWTKKDTVNYGLQLT 40
L ++AL +W D +NY + T
Sbjct: 127 LCAIALDRYWAITDPINYAQKRT 149
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 108 LMSLALTSFWTKKDTVNYGLQLT 40
L ++AL +W D +NY + T
Sbjct: 127 LCAIALDRYWAITDPINYAQKRT 149
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 108 LMSLALTSFWTKKDTVNYGLQLT 40
L ++AL +W D +NY + T
Sbjct: 127 LCAIALDRYWAITDPINYAQKRT 149
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 467 LLSIAGYSD*CSA*PAHRLWCLRRCMGC 550
LL+I D CS P+ R C+GC
Sbjct: 12 LLAIVFLFDKCSGYPSIRQGTTSYCLGC 39
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +3
Query: 543 WAVTDPRDGRRVALKKLPNVFQSLVSSK 626
W V + DG + + L ++FQ + +S+
Sbjct: 519 WKVGNHEDGYLIGVNNLIDIFQDIRNSE 546
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +3
Query: 543 WAVTDPRDGRRVALKKLPNVFQSLVSSK 626
W V + DG + + L ++FQ + +S+
Sbjct: 434 WKVGNHEDGYLIGVNNLIDIFQDIRNSE 461
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +3
Query: 543 WAVTDPRDGRRVALKKLPNVFQSLVSSK 626
W V + DG + + L ++FQ + +S+
Sbjct: 753 WKVGNHEDGYLIGVNNLIDIFQDIRNSE 780
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 8.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 650 HLELAEDTF*GDKRLEYVRQFLERHPPAIARVRHSP 543
H E + + G+ +E V+ + R PPA + R P
Sbjct: 447 HTECEDLSVSGEAGIEEVKSPVLRSPPAFSHSRCPP 482
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 8.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 650 HLELAEDTF*GDKRLEYVRQFLERHPPAIARVRHSP 543
H E + + G+ +E V+ + R PPA + R P
Sbjct: 447 HTECEDLSVSGEAGIEEVKSPVLRSPPAFSHSRCPP 482
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 597 NVFQSLVSSKRVFRE 641
N+ QSL SS+R +RE
Sbjct: 376 NLIQSLDSSRRQYRE 390
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 597 NVFQSLVSSKRVFRE 641
N+ QSL SS+R +RE
Sbjct: 344 NLIQSLDSSRRQYRE 358
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,018
Number of Sequences: 438
Number of extensions: 3873
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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