Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19b14
         (347 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   0.51 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   4.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   4.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   6.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   6.3  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory
          receptor candidate 34 protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 0.51
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 15 IWSTSLRSAATLLTIANSLSRPFSK 89
          I+S  L +  TLL I +S+ RP+ K
Sbjct: 25 IYSFLLLTTLTLLVILSSIDRPYLK 49


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 22  RRVCVRQQRY*LLRTVYHGHFRNFYAQ 102
           ++ CV  Q    +  + +GH++NF +Q
Sbjct: 193 QKFCVVNQYIKQVCKLNNGHYKNFLSQ 219


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 22  RRVCVRQQRY*LLRTVYHGHFRNFYAQ 102
           ++ CV  Q    +  + +GH++NF +Q
Sbjct: 18  QKFCVVNQYIKQVCKLNNGHYKNFLSQ 44


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 98  LSSKIVVAVPVNWENDNLS 154
           L SKI+   P++++N N++
Sbjct: 15  LLSKILGIAPISYKNSNVN 33


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 307 PRLRNLNLMHSS 272
           PRL +LNL H+S
Sbjct: 418 PRLASLNLGHNS 429


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,957
Number of Sequences: 336
Number of extensions: 1283
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)