Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19b14
         (347 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11692-1|CAA77750.1|  858|Homo sapiens human  elongation factor ...    28   7.0  
X51466-1|CAA35829.1|  858|Homo sapiens elongation factor 2 protein.    28   7.0  
BC126259-1|AAI26260.1|  858|Homo sapiens EEF2 protein protein.         28   7.0  
BC006547-1|AAH06547.1|  583|Homo sapiens EEF2 protein protein.         28   7.0  
AY942181-1|AAX34409.1|  858|Homo sapiens elongation factor 2 pro...    28   7.0  

>Z11692-1|CAA77750.1|  858|Homo sapiens human  elongation factor 2
           protein.
          Length = 858

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -2

Query: 247 KRSITRFST*FVLIYNFNSNEI*VVQMFQKYT*IIVFPIDGHGHNDFTAE 98
           +R IT  ST   L Y  + N++  ++  +     ++  ID  GH DF++E
Sbjct: 65  ERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSE 114


>X51466-1|CAA35829.1|  858|Homo sapiens elongation factor 2 protein.
          Length = 858

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -2

Query: 247 KRSITRFST*FVLIYNFNSNEI*VVQMFQKYT*IIVFPIDGHGHNDFTAE 98
           +R IT  ST   L Y  + N++  ++  +     ++  ID  GH DF++E
Sbjct: 65  ERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSE 114


>BC126259-1|AAI26260.1|  858|Homo sapiens EEF2 protein protein.
          Length = 858

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -2

Query: 247 KRSITRFST*FVLIYNFNSNEI*VVQMFQKYT*IIVFPIDGHGHNDFTAE 98
           +R IT  ST   L Y  + N++  ++  +     ++  ID  GH DF++E
Sbjct: 65  ERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSE 114


>BC006547-1|AAH06547.1|  583|Homo sapiens EEF2 protein protein.
          Length = 583

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -2

Query: 247 KRSITRFST*FVLIYNFNSNEI*VVQMFQKYT*IIVFPIDGHGHNDFTAE 98
           +R IT  ST   L Y  + N++  ++  +     ++  ID  GH DF++E
Sbjct: 65  ERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSE 114


>AY942181-1|AAX34409.1|  858|Homo sapiens elongation factor 2
           protein.
          Length = 858

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = -2

Query: 247 KRSITRFST*FVLIYNFNSNEI*VVQMFQKYT*IIVFPIDGHGHNDFTAE 98
           +R IT  ST   L Y  + N++  ++  +     ++  ID  GH DF++E
Sbjct: 65  ERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSE 114


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,249,636
Number of Sequences: 237096
Number of extensions: 699534
Number of successful extensions: 1048
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)