Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19b12
         (552 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...   116   1e-26
Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...    72   3e-13
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...    53   1e-07
U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical p...    53   1e-07
AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock pr...    53   1e-07
AL023828-7|CAA19452.1|  881|Caenorhabditis elegans Hypothetical ...    31   0.42 
U29381-3|AAA68758.2|  617|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z46240-2|CAA86311.1|  213|Caenorhabditis elegans Hypothetical pr...    27   6.8  

>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score =  116 bits (278), Expect = 1e-26
 Identities = 57/83 (68%), Positives = 68/83 (81%)
 Frame = +2

Query: 281 EGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEI 460
           E +  + +   REE++I  D LSV+Q+KELR +A+ + FQ EVNRMMKLIINSLYRNKEI
Sbjct: 28  EDAPKETKEETREEDSIKLDGLSVSQIKELRSKAEKHEFQAEVNRMMKLIINSLYRNKEI 87

Query: 461 FLRELISNGSDALDKIRLMSLTD 529
           FLRELISN SDALDKIRL+SLTD
Sbjct: 88  FLRELISNASDALDKIRLLSLTD 110


>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score = 71.7 bits (168), Expect = 3e-13
 Identities = 32/59 (54%), Positives = 44/59 (74%)
 Frame = +2

Query: 368 LRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLE 544
           + + A+ + FQ E+ ++M LIIN+ Y NKEI+LRELISN SDALDKIR  +LT+   L+
Sbjct: 1   MSENAETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELD 59


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 24/56 (42%), Positives = 34/56 (60%)
 Frame = +2

Query: 356 QMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSL 523
           Q + +    Q + FQ E   +M ++  SLY + E+F+RELISN SDAL+K R   L
Sbjct: 34  QRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL 89


>U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical
           protein R151.7b protein.
          Length = 479

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 24/56 (42%), Positives = 34/56 (60%)
 Frame = +2

Query: 356 QMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSL 523
           Q + +    Q + FQ E   +M ++  SLY + E+F+RELISN SDAL+K R   L
Sbjct: 34  QRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL 89


>AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock
           protein 75 protein.
          Length = 222

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 24/56 (42%), Positives = 34/56 (60%)
 Frame = +2

Query: 356 QMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSL 523
           Q + +    Q + FQ E   +M ++  SLY + E+F+RELISN SDAL+K R   L
Sbjct: 34  QRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRYAEL 89


>AL023828-7|CAA19452.1|  881|Caenorhabditis elegans Hypothetical
           protein Y17G7B.5a protein.
          Length = 881

 Score = 31.5 bits (68), Expect = 0.42
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
 Frame = +2

Query: 269 GSSREGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYR 448
           G    G   D ++V  EEE I  D L   + + +RD   +     E+ R  K  + S + 
Sbjct: 122 GRRGRGDAADDDSVPMEEEDIPVDILENIRGRTIRDHVSDEAVAKEIERRFKNFLRSFHE 181

Query: 449 --NKEI-FLRELISNGSDALDKIRLMSLTD 529
             NK+  +++ + S  +D  + +  +S TD
Sbjct: 182 PGNKQTKYIQMIKSMAADNRESLE-VSFTD 210


>U29381-3|AAA68758.2|  617|Caenorhabditis elegans Hypothetical
           protein F35D11.3 protein.
          Length = 617

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 320 EEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKL 427
           E   SPD   V Q + LR   + YT + E N +M+L
Sbjct: 316 ESDTSPDQAFVHQWRHLRHTKEQYTLRYESNYLMEL 351


>Z46240-2|CAA86311.1|  213|Caenorhabditis elegans Hypothetical
           protein B0272.2 protein.
          Length = 213

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 422 KLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGV 538
           +L++N   ++    L +LIS GS  L+ ++   L  RGV
Sbjct: 123 ELLLNDRLQSSHTHLDDLISQGSAVLENLKSQHLNLRGV 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,276,768
Number of Sequences: 27780
Number of extensions: 175586
Number of successful extensions: 473
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)