Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19b06
         (549 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2735|AAZ52804.1|  180|Drosophila melanogaster CG33724-P...    31   1.0  
AE013599-3313|AAF46788.1|  404|Drosophila melanogaster CG13500-P...    29   3.1  
AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-P...    28   7.2  
AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-P...    28   7.2  
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    28   9.6  

>AE013599-2735|AAZ52804.1|  180|Drosophila melanogaster CG33724-PA
           protein.
          Length = 180

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 25/96 (26%), Positives = 38/96 (39%)
 Frame = +2

Query: 128 NTLALKSINFLNM*YFNFATTRTCARL*KTTTITVCKYLKRPPTTCATSGTILNAHSKRQ 307
           N  A K   F N  Y +F   ++      TT   +C +  R  T    +G +       +
Sbjct: 90  NAAASKPCEFFNRYYISFFLVKSTESNLPTTGAEMCPF--RKGTYFVKNGVV-----STE 142

Query: 308 CWATCVCLATNRQCIRFLKNGFCCHTTKWSLSKANL 415
            W   V    NR  I +LKNG C    + ++S A +
Sbjct: 143 DWPPIVFKGLNRFTISYLKNGECVGGVQLTISIAEI 178


>AE013599-3313|AAF46788.1|  404|Drosophila melanogaster CG13500-PA
           protein.
          Length = 404

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 55  WICLRLNDAIIKRHVLVLSEY--ADLKYLGFEKYKFFE 162
           W  LRL++  I RHVL+L  +  A   YLG  + ++ E
Sbjct: 4   WHSLRLSNRYISRHVLLLLRFYLAQFYYLGLMRLRYDE 41


>AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-PB,
            isoform B protein.
          Length = 2968

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
 Frame = +2

Query: 233  CKYLKRPPT-----TCATSGTILNAHSKRQCWATCVCLATNRQCIRFLKNG 370
            C  L R PT     +C +S T+  A        T  C A N  CI  L+NG
Sbjct: 2776 CNELSRLPTEGECLSCDSSKTLECAQDPTAVLTTITCHAPNSDCITRLENG 2826


>AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-PA,
            isoform A protein.
          Length = 2931

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
 Frame = +2

Query: 233  CKYLKRPPT-----TCATSGTILNAHSKRQCWATCVCLATNRQCIRFLKNG 370
            C  L R PT     +C +S T+  A        T  C A N  CI  L+NG
Sbjct: 2739 CNELSRLPTEGECLSCDSSKTLECAQDPTAVLTTITCHAPNSDCITRLENG 2789


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
           protein.
          Length = 1286

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
 Frame = -3

Query: 460 CCPNRTRPRAEIPTSKIR-F*ERPLCSVATETIL*ETNTLAVCC*AHTCGPT 308
           C P RT PR+   TS  R     P C+    T    T T        TC PT
Sbjct: 313 CSPTRTTPRSTTTTSTSRPTTTTPRCTTTPSTSRPTTTTPRSTTKTSTCAPT 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,246,834
Number of Sequences: 53049
Number of extensions: 602776
Number of successful extensions: 1730
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1719
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)