Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19b05
(700 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 417 e-118
AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein. 27 0.43
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 25 3.0
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 3.0
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 3.0
DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor... 24 5.3
AY330177-1|AAQ16283.1| 166|Anopheles gambiae odorant-binding pr... 23 7.0
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 23 7.0
CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein ... 23 9.2
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 23 9.2
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 417 bits (1026), Expect = e-118
Identities = 187/221 (84%), Positives = 204/221 (92%)
Frame = +2
Query: 38 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 217
MGRVIRAQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60
Query: 218 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 397
V+FRDPY+F+ K+LFIA EG+YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK
Sbjct: 61 VNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKT 120
Query: 398 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 577
GDRG+LAR SGN+A+VI HNPD KRTRVKLPSGAKKVLPS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPIL 180
Query: 578 KAGRAYHKYKVKRNCWPYVRGVAMNPVXHPHGGGNHQHIGK 700
KAGRAYHKYKVKRNCWP VRGVAMNPV HPHGGGNHQHIGK
Sbjct: 181 KAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGK 221
>AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein.
Length = 144
Score = 27.5 bits (58), Expect = 0.43
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 515 SSNRGMVGIVAGGGRIDKPILKAGRAYHK 601
S+ + +G V GG D IL GRAYH+
Sbjct: 81 SAGQVPLGAVVGGHTSDGEILYVGRAYHE 109
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 24.6 bits (51), Expect = 3.0
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +1
Query: 517 KQQRHGRYCCWRWTY 561
+QQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 146 RHGYIKGVVKDIIHDP 193
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 146 RHGYIKGVVKDIIHDP 193
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor 24
protein.
Length = 378
Score = 23.8 bits (49), Expect = 5.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 418 CQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLA 290
C+T SIT + LRH +S ++S +L ++KLA
Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221
>AY330177-1|AAQ16283.1| 166|Anopheles gambiae odorant-binding
protein AgamOBP50 protein.
Length = 166
Score = 23.4 bits (48), Expect = 7.0
Identities = 11/44 (25%), Positives = 18/44 (40%)
Frame = -1
Query: 310 STINKLACVEPFGSNEELLPCLELVWIAEVYNSQRCTSTRVMDY 179
S + KL C+ PF + ++ C +L + C T Y
Sbjct: 8 SVVGKLTCLSPFLQSIKVASCCQLEAFLTLPTYGNCLQTIAEKY 51
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 23.4 bits (48), Expect = 7.0
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 653 GSWQHHVHMASSYV*PCTCGMPFQLSK*VCQY 558
GS H SSYV CG P ++ C++
Sbjct: 504 GSEGHKARDCSSYVKCAACGGPHRIGHMSCEH 535
>CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein
protein.
Length = 196
Score = 23.0 bits (47), Expect = 9.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 211 GCCTLPRSIQVQDKEGALHCSRR 279
GCC LP + Q K+ + + + R
Sbjct: 16 GCCALPANTNAQTKQDSSNNNNR 38
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 23.0 bits (47), Expect = 9.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 567 LSIRPPPATIPTM 529
+ +RPPP +PTM
Sbjct: 114 MGMRPPPMMVPTM 126
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 814,366
Number of Sequences: 2352
Number of extensions: 18482
Number of successful extensions: 39
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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