Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19a23
(634 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 123 1e-28
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 101 5e-22
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 8e-17
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 79 2e-15
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 77 2e-14
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 73 1e-13
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 64 1e-10
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 62 5e-10
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 58 8e-09
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 56 3e-08
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 52 5e-07
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 51 9e-07
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 51 9e-07
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 49 4e-06
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 48 5e-06
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 47 1e-05
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 46 3e-05
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 45 4e-05
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 45 6e-05
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 45 6e-05
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 44 8e-05
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 36 1e-04
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 44 1e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 43 2e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 42 6e-04
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 42 6e-04
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 42 6e-04
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 40 0.002
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 38 0.009
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 38 0.009
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 37 0.012
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 36 0.027
SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 35 0.063
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 34 0.083
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.083
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 34 0.11
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 33 0.15
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 33 0.19
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 33 0.19
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 32 0.34
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 31 0.78
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 31 1.0
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_38604| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 29 2.4
SB_8368| Best HMM Match : VWA (HMM E-Value=0) 29 2.4
SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05) 29 3.1
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 29 3.1
SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2) 29 3.1
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 29 4.1
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 29 4.1
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 29 4.1
SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_50597| Best HMM Match : 7tm_1 (HMM E-Value=2.59941e-42) 28 5.5
SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19) 28 5.5
SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37) 28 5.5
SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017) 28 5.5
SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5) 28 7.2
SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 28 7.2
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_1065| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_56231| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_43316| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_23339| Best HMM Match : I-set (HMM E-Value=1.3e-07) 27 9.6
SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_15580| Best HMM Match : Pentapeptide (HMM E-Value=0.2) 27 9.6
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 123 bits (296), Expect = 1e-28
Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 1/159 (0%)
Frame = +2
Query: 161 GDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 340
G S D N DD KLFVGGLS+ETT + L+++F YGE+ +++K D TGR RG
Sbjct: 12 GTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRG 71
Query: 341 FAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 520
FAF+ FK D + I K R KIFVGGL E SD++IR +F +
Sbjct: 72 FAFVQFKHQSEADAIDPKPAAPIG------KPPHLRVKKIFVGGLKPETSDEKIREYFGK 125
Query: 521 -FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 634
+ + E+E + + N+R+GFCF++F+SE V+ + +T
Sbjct: 126 AYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICET 164
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFG-AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
+K+FVGGL ET+D+++R++FG AY ++ I T+ ++ R RGF F+ F + +++DK+
Sbjct: 103 KKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKIC 162
Query: 389 AAGEHTINNKKVDPKKA 439
H I KV+ K+A
Sbjct: 163 ETQFHNIEGNKVEVKRA 179
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 101 bits (242), Expect = 5e-22
Identities = 49/154 (31%), Positives = 101/154 (65%), Gaps = 19/154 (12%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
RK+F+GGL+W TT++ L+D+F +G I + + +K D GRSRGF F+ +++ +S+++V+
Sbjct: 50 RKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRD---GRSRGFGFVTYESSDSVNEVL 106
Query: 389 AAGEHTINNKKVDPKK-----------AKARHGKIFVGGLSSEISDDEIRNFFSE----- 520
+H +++++++PK+ A ++ KIFVGGL+S +++I+ +F+
Sbjct: 107 KKKDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFNSLCRKN 166
Query: 521 -FGTILEVEMPFDKTKNQR-KGFCFITFESEQVV 616
G +++V++ D+ +R +GF F+TF+++++V
Sbjct: 167 GMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIV 200
Score = 58.0 bits (134), Expect = 6e-09
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAY------GEIESINVKTD-PNTGRSRGFAFIVFKAPE 370
RK+FVGGL+ T +++++++F + GE+ +++K D N R RGFAF+ F E
Sbjct: 139 RKIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDE 198
Query: 371 SIDKVMAAGEHTINNKKVDPKKAK 442
++KV A H I K+ + KKA+
Sbjct: 199 IVEKVCAMKYHEIRMKQCEVKKAE 222
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/59 (38%), Positives = 41/59 (69%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 631
KIF+GGL+ +++ ++++FS++GTI V+ K + +GF F+T+ES VN++LK
Sbjct: 51 KIFIGGLNWNTTEEGLKDYFSQWGTI--VDCVIMKRDGRSRGFGFVTYESSDSVNEVLK 107
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 84.2 bits (199), Expect = 8e-17
Identities = 53/162 (32%), Positives = 93/162 (57%), Gaps = 21/162 (12%)
Frame = +2
Query: 203 DDDR--KLFVGGLSWETTDKELRDHF-----GAYGEIESINVKTDPNTGRSRGFAFIVFK 361
DD + KLFVGGL+ +TT++ +R +F G+ ++ S+++ P G+SR F F+ F
Sbjct: 3 DDSKLMKLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPE-GKSRKFCFVEFS 61
Query: 362 -APESIDKVMAAGE-HTINNKKVDPKKAKARHG----------KIFVGGLSSEISDDEIR 505
+ ID ++ E H+I+NK+V+ K+A R K+F+GGL E S+++++
Sbjct: 62 NGSDIIDNIVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGLKDEHSEEDVK 121
Query: 506 NFFSEFGTI--LEVEMPFDKTKNQRKGFCFITFESEQVVNDL 625
+ LE++M D+ N+ KG+CF+ F +E +V+ L
Sbjct: 122 TALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKL 163
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKT--DPNTGRSRGFAFIVFKAPESIDKV 385
+KLF+GGL E ++++++ + +K D T + +G+ F+ F +DK+
Sbjct: 104 KKLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKL 163
Query: 386 MAAGEHTINNKKVDPKKA 439
+ K V+ KKA
Sbjct: 164 YLVRHIQVKGKDVEMKKA 181
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 79.8 bits (188), Expect = 2e-15
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 397
L V GL + TT+ E++++F +GEI+ VK DPNT RSRGF F+ FK E V++
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLST- 175
Query: 398 EHTINNKKVD-----PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT 562
H I + + PK+ K+FVG L ++ + +F++FG + +V +P
Sbjct: 176 SHRIQGRLCEVRLPRPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIP---- 231
Query: 563 KNQRKGFCFITFES 604
+ F F+TF S
Sbjct: 232 -KPFRHFGFVTFAS 244
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 452 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 631
G + V GL ++ E++ +F+ FG I E+ D + +GF F+ F+ ++ ++L
Sbjct: 115 GDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLS 174
Query: 632 T 634
T
Sbjct: 175 T 175
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 343
+KLFVG L TT+K L ++F +GE+ + + P R GF
Sbjct: 199 KKLFVGRLPESTTEKTLMEYFAQFGEVTDVYI---PKPFRHFGF 239
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/91 (40%), Positives = 59/91 (64%)
Frame = +2
Query: 260 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 439
LR HF +GE++ V DP T RSRGF F+ FK P+++D V+ +G +++D KK
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGA-----QELDGKKM 178
Query: 440 KARHGKIFVGGLSSEISDDEIRNFFSEFGTI 532
KIF+GGLS+ S+++++ +FS+FG +
Sbjct: 179 VTTTKKIFIGGLSTNTSEEDMKKYFSQFGKV 209
Score = 32.3 bits (70), Expect = 0.34
Identities = 9/27 (33%), Positives = 22/27 (81%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEI 292
+K+F+GGLS T++++++ +F +G++
Sbjct: 183 KKIFIGGLSTNTSEEDMKKYFSQFGKV 209
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = +2
Query: 479 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 634
++ S + +R F +FG + E + D + +GF F+TF+ + V+ +L +
Sbjct: 117 TQASAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNS 168
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 78.6 bits (185), Expect = 4e-15
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 18/167 (10%)
Frame = +2
Query: 179 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 358
N E D KLFVGGL+ ETT++ LR++F AYGE+ + V D T +SRGF ++ F
Sbjct: 3 NRQENTNNDPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTF 62
Query: 359 ---KAPESI--DKVMAAGEHTINNKKVDPKKAKARHG----------KIFVGGLSSEISD 493
K ++ DKV G H I+ K+V+ K+A R KIFVGGL + +
Sbjct: 63 ADYKVTRNVLKDKV-ENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPEDATK 121
Query: 494 DEIRNFFSEF--GTILEVEMPFDK-TKNQRKGFCFITFESEQVVNDL 625
++I+ + +V++ K + + +GF F+ +E ++L
Sbjct: 122 EDIQEAIESLLEEKVDKVDLIMKKEDETKHRGFAFVELNNEDQADEL 168
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/59 (32%), Positives = 37/59 (62%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 631
K+FVGGL+ E +++ +R +F +G + +V + D + +GF ++TF +V ++LK
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLK 73
Score = 41.5 bits (93), Expect = 6e-04
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Frame = +2
Query: 104 FAQDITTDNQLNGNAENGGG--DSQDHNSAEAPGRDDD--------RKLFVGGLSWETTD 253
FA T N L ENG D ++ A RDD+ +K+FVGGL + T
Sbjct: 62 FADYKVTRNVLKDKVENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPEDATK 121
Query: 254 KELRDHFGAYGE--IESINV--KTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 421
+++++ + E ++ +++ K + T + RGFAF+ + D++ + + K
Sbjct: 122 EDIQEAIESLLEEKVDKVDLIMKKEDET-KHRGFAFVELNNEDQADELCCVKKIHVKGKM 180
Query: 422 VDPKKAKAR 448
V+ KKA R
Sbjct: 181 VEAKKATPR 189
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 76.6 bits (180), Expect = 2e-14
Identities = 42/142 (29%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGE-IESIN-VKTDPNTGRSRGFAFIVFKAPESIDKV 385
R +FVG L T + + ++F GE +E + ++T +G+S+GFAF+ + E+++ V
Sbjct: 42 RTIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRT--LSGKSKGFAFVRLRKKEAVESV 99
Query: 386 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 565
+ +H I+N V +K + K+ + + S I + +I FS G I V +P +
Sbjct: 100 LGRDDHVIDNSDVSMEKQDT-YRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKT 158
Query: 566 NQRKGFCFITFESEQVVNDLLK 631
+RKG C +TF S +++K
Sbjct: 159 KERKGHCIVTFASVTEAFEVVK 180
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/155 (18%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Frame = +2
Query: 173 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 352
D++ +D RK+ + + + ++ +HF + GEI S+ + + T +G +
Sbjct: 108 DNSDVSMEKQDTYRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCIV 167
Query: 353 VFKAPESIDKVMAAGEHTINNKKV--DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 526
F + +V+ +H I+ + + + K+ + L ++ D+I+N FG
Sbjct: 168 TFASVTEAFEVVKKRKHHIHGYDIITEYYMNLKQPKKLCLKNLPYNVTVDQIKNRMDGFG 227
Query: 527 TILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 631
++E+++ +++ + F+ F +E + +++K
Sbjct: 228 GLMEIDLAVMPDRSECE--AFLIFSNEDSIREIMK 260
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 73.3 bits (172), Expect = 1e-13
Identities = 40/113 (35%), Positives = 64/113 (56%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
+ R +FVGGL+ T ++ L+D+F +GE+ES+ + G SR + F++FK + K
Sbjct: 78 NSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFK-DDGPSKE 135
Query: 386 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVE 544
+ H IN K VD K++ I+VGGL S ++ +R F +FG I V+
Sbjct: 136 VLKKSHVINGKTVDVGKSR-NFRVIYVGGLPSHFTEQTVREHFKKFGVIEAVK 187
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +2
Query: 209 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
+R LFV LS +T + ++ +F YG++ +++ TD TG+S+G + + P +++K++
Sbjct: 318 ERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKIL 377
Query: 389 AAGEHTINNKKV 424
H I +V
Sbjct: 378 EEPVHVIGKSQV 389
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/118 (21%), Positives = 52/118 (44%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 391
R ++VGGL T++ +R+HF +G IE++ + + G G + E + +
Sbjct: 157 RVIYVGGLPSHFTEQTVREHFKKFGVIEAVKFIENTSVGAKTGXXXXE-EDQEILGCPVT 215
Query: 392 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 565
+ D + K+ V L + + DE+R +F + G + +++ + K
Sbjct: 216 VRARSGKESNEDLMAKVIQSKKLMVQDLDFDTTVDELREYFEKCGELTGIDLLINSEK 273
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/74 (22%), Positives = 37/74 (50%)
Frame = +2
Query: 410 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 589
N+ PK + +FVGGL+S ++ ++++F +FG + V + + + F
Sbjct: 66 NSTLPSPKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRI-MRTFLGYSRNYGF 124
Query: 590 ITFESEQVVNDLLK 631
+ F+ + ++LK
Sbjct: 125 VLFKDDGPSKEVLK 138
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/155 (21%), Positives = 80/155 (51%), Gaps = 17/155 (10%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES------- 373
+++VG +++E ++ +R F +G I I++ DP + +GFAF+ + PE+
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQ 162
Query: 374 IDKVMAAGEHT-----INNKKVDP-----KKAKARHGKIFVGGLSSEISDDEIRNFFSEF 523
++ V+ G + N + P ++ ++ +I++ + ++ +D+I++ F F
Sbjct: 163 MNGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVFEAF 222
Query: 524 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 628
G ++ + + + KG+ FI +E++Q ND +
Sbjct: 223 GKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAI 257
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/57 (28%), Positives = 35/57 (61%)
Frame = +2
Query: 431 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 601
++A A +++VG ++ E+ ++ IR F FG I ++++ +D + KGF F+ ++
Sbjct: 95 QRALALMCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYD 151
Score = 35.5 bits (78), Expect = 0.036
Identities = 11/60 (18%), Positives = 36/60 (60%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
++++ + + + +++ F A+G++ ++ +P TG+ +G+ FI ++ +S + +A+
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIAS 259
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 61.7 bits (143), Expect = 5e-10
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 7/185 (3%)
Frame = +2
Query: 98 DNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFG 277
D A +T+ ++ D D + L++ GL TTD +L
Sbjct: 62 DKKAYSVTSSQSPGLSSGRSSSDRMDSLPDTGEEKLSKTNLYIRGLKANTTDDDLVRLCH 121
Query: 278 AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-- 451
YG I S D +T +G+ F+ F++P S K +AA + NK + + AK +
Sbjct: 122 KYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAVAA----LVNKGIQAQMAKQQEQD 177
Query: 452 -GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES----EQVV 616
+++ L + + N FS++G ++ + DK N KG F ES EQV+
Sbjct: 178 PTNLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDTNS-KGVGFARMESAEKCEQVI 236
Query: 617 NDLLK 631
D K
Sbjct: 237 KDFNK 241
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 59.7 bits (138), Expect = 2e-09
Identities = 39/174 (22%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
Frame = +2
Query: 134 LNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 313
++ N++ D +H E D+ L + + + ++++ FG G + S +
Sbjct: 1 MDDNSKAMAEDINNHEPMENGTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIR 60
Query: 314 DPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNK--KVD---PKKAKARHGKIFVGGL 475
D TG+S G+AF+ + P+ +K V + NK KV P + ++ +++ GL
Sbjct: 61 DRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARPSSTEIKNANLYISGL 120
Query: 476 SSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF----ESEQVVNDL 625
++ ++E+ F FG I+ ++ D + +G F+ F E++ ++DL
Sbjct: 121 PKDMKEEEVEALFKPFGKIITSKVLKD-VSGEGRGTGFVRFDKRCEAQTAIDDL 173
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 57.6 bits (133), Expect = 8e-09
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Frame = +2
Query: 200 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 379
R+ D ++VGGL + ++ + + F G + ++++ D T +G+ F+ F E D
Sbjct: 9 RNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDAD 68
Query: 380 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILE 538
+ + K + KA A + +F+G L +E+ + + + FS FG IL+
Sbjct: 69 YAIKVMNMIKVYGKPIRVNKASAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQ 128
Query: 539 V-EMPFDKTKNQRKGFCFITFES 604
++ D KGF FI F S
Sbjct: 129 TPKIMRDSDTGNSKGFAFINFAS 151
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +2
Query: 182 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVF 358
SA D LF+G L E +K L D F A+G I ++ + D +TG S+GFAFI F
Sbjct: 90 SAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINF 149
Query: 359 KAPESIDKVMAA--GEHTIN 412
+ ++ D + A G++ N
Sbjct: 150 ASFDASDAAIEAMNGQYLCN 169
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +2
Query: 428 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 607
P + + I+VGGL ++S+ I F + G ++ V MP D+ +G+ F+ F E
Sbjct: 5 PIAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGE 64
Query: 608 QVVNDLLK 631
+ + +K
Sbjct: 65 EDADYAIK 72
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Frame = +2
Query: 188 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 367
E+ D R +F L+ ++L + F G++ + + +D N+ RS+G A+I F
Sbjct: 138 ESAEEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDK 197
Query: 368 ESIDKVMA-AGEHTI-------------NNKKVDPKKAKARHG--KIFVGGLSSEISDDE 499
++ + +G+ + N + ++ K G +++VG L I++
Sbjct: 198 SAVPLAIGLSGQKLLGAPIMVMLTQAEKNRLAAEAERLKQPLGPTRLYVGSLHFNITEAM 257
Query: 500 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 610
++ F FGT+ V++ +D N+ KG+ F+ F +
Sbjct: 258 VKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAE 294
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
+L+VG L + T+ ++ F +G ++S+ + D T RS+G+ F+ F+ E+ + M
Sbjct: 243 RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAM 300
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 51.6 bits (118), Expect = 5e-07
Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP---ESIDKVM 388
L+VG L+ + T+ L + F G + SI V D T RS G+A++ F+ P +++ +
Sbjct: 15 LYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHDAALEAIA 74
Query: 389 AAGEHTINNKKV------DPKKAKARHG-------KIFVGGLSSEISDDEIRNFFSEFGT 529
+N+KKV K+ + G ++V ++ D++++ +E G
Sbjct: 75 RVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGK 134
Query: 530 ILEVEMPFDKTKNQRKGFCFITFESEQ 610
I+ +++ D + + KGF F++FE+ +
Sbjct: 135 IVSLKVMTD-PEGKSKGFGFVSFETPE 160
Score = 49.2 bits (112), Expect = 3e-06
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 24/155 (15%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAA 394
++V + D+++++ G+I S+ V TDP G+S+GF F+ F+ PE ++ V
Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFETPEEAEEAVNVL 169
Query: 395 GEHTINNKKVDPKKAKARHGK-----------------------IFVGGLSSEISDDEIR 505
I +++ +AK R + +++ L I D+ +R
Sbjct: 170 NGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDPIDDERLR 229
Query: 506 NFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 610
FS +GTI ++ D K KGF F+ F S +
Sbjct: 230 EEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPE 263
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
L++ L D+ LR+ F YG I S V D + G S+GF F+ F +PE K +
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAV 269
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 50.8 bits (116), Expect = 9e-07
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Frame = +2
Query: 155 GGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR 331
GGG +++ E PG R LFVG + TT +L++ F YGE+ +++K P
Sbjct: 231 GGGSISNYSEDEFDPGCT--RTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPG--- 285
Query: 332 SRGFAFIVF-KAPESIDKVMAAGEHTINNKKVDPKKAKARH-GKIFVGGLSSEISDDEIR 505
+ +AF+ F + +I + +V K I+VGG+++ +S+ ++
Sbjct: 286 NNPYAFVQFAELSSAIQARRKMDREYVGRNRVKVGFGKVNPINTIWVGGVTNSLSEQQVE 345
Query: 506 NFFSEFGTILEV 541
F +G + +V
Sbjct: 346 RHFGRYGRVTKV 357
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINV--KTDPNTGRSRGFAFI 352
+ R L+VG L ++++ HF YG +ES+ + K GR+ F+
Sbjct: 4 ETRHLWVGNLPENIREEDIVKHFTRYGRVESVKILPKRSAEGGRASFVDFV 54
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPN 322
++VGG++ +++++ HFG YG + + + N
Sbjct: 330 IWVGGVTNSLSEQQVERHFGRYGRVTKVVINRVTN 364
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 625
+IFV G + E ++ E+R FF E+G + E ++ DK KG+ FITFES++V + L
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDK-HGVSKGYAFITFESQEVADGL 64
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +2
Query: 200 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 379
+D +++FV G + ETT+ ELR F YG ++ + D + G S+G+AFI F++ E D
Sbjct: 4 QDISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKH-GVSKGYAFITFESQEVAD 62
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 50.4 bits (115), Expect = 1e-06
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 11/189 (5%)
Frame = +2
Query: 86 MANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDR---KLFVGGLSWETTDK 256
+ + + DITT + G G + PG ++ ++F+G + + +
Sbjct: 114 LLDRTGYTLDITTGQRKYGGPPPGW-------EGKPPGTGSEKVCSQVFIGKVPRDCFED 166
Query: 257 ELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK 436
EL F G I + DP +G ++GFAF F + + ++NK++ P K
Sbjct: 167 ELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAV----KKLDNKEIRPGK 222
Query: 437 -----AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE---VEMPFDKTKNQRKGFCFI 592
+ ++FVG + S EI FS+ L+ V + D+ K + +GF F+
Sbjct: 223 RLGVCISVANSRLFVGSIPKTKSKQEILEEFSKVTNGLDDVIVYLSADQ-KGKNRGFAFL 281
Query: 593 TFESEQVVN 619
+ES Q +
Sbjct: 282 EYESHQAAS 290
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 631
++F+G + + +DE+ F E G I + + D KGF F TF ++ + +K
Sbjct: 153 QVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVK 211
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/62 (32%), Positives = 39/62 (62%)
Frame = +2
Query: 191 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 370
A G + RKL++G L++ + + E+ F +G +E +++ D +GRSRGF F++ ++ +
Sbjct: 2 ADGENRGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSAD 60
Query: 371 SI 376
I
Sbjct: 61 QI 62
Score = 35.5 bits (78), Expect = 0.036
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +2
Query: 446 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 604
R K+++G L+ + EI F EFG + +V++ DK + +GF F+ +S
Sbjct: 7 RGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQS 58
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/104 (24%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +2
Query: 89 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRD--DDRKLFVGGLSWETTDKEL 262
+++D + ++ D+ N ++ D++S + D + +F+ LS+++T K +
Sbjct: 373 SDDDEDVKHMSKDDNNNEKSDEDDASEDDNHSQRSKPSDVKEGLTVFIRNLSFDSTQKNI 432
Query: 263 RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
+ F +G+I V D T S+G AF+ +++ ES+ + +AA
Sbjct: 433 TNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAA 476
Score = 41.1 bits (92), Expect = 7e-04
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Frame = +2
Query: 167 SQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 346
S+ + +AP D R + + GL T+K++ GE+E + +
Sbjct: 145 SKSKSLRKAPQTDAGRTVILSGLPASITEKQIYKRCRKLGEVEKTIFPVAGHDSPTASLL 204
Query: 347 FIVFK-APESIDKVMAAGEHTINNKKVDPKKAK------ARHGKIFVGGLSSEISDDEIR 505
F +K A +++ K+ + K V K K ++ ++ + L+ ++ ++
Sbjct: 205 FKSYKDARQAVAKLNGKTLKGVKVKAVIESKDKSSSPKGSKKSRLIIRNLAFNCTEAILK 264
Query: 506 NFFSEFGTILEVEMPFDKT--KNQRKGFCFITF 598
FS FG + E +P K +N++ GF F+ F
Sbjct: 265 ETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQF 297
Score = 34.7 bits (76), Expect = 0.063
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 410 NNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 586
+N K + + G +F+ LS + + I N F +FG I ++ D KG
Sbjct: 401 DNHSQRSKPSDVKEGLTVFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSA 460
Query: 587 FITFESEQVVNDLL 628
F+ + S + V L
Sbjct: 461 FVKYRSAESVTQCL 474
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/98 (21%), Positives = 48/98 (48%)
Frame = +2
Query: 203 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 382
D R +F+G L ++ ++ LR+ F G +ES+ + D TG +GF +++F++ +++
Sbjct: 53 DHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVF 112
Query: 383 VMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDD 496
+ +K+ +K + F+ + D+
Sbjct: 113 ALKMNNAEFKGRKIRVFPSKDKPQTEFISHIQVRFRDN 150
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Frame = +2
Query: 347 FIVFKAPESIDKVMAAGEHTIN--NKKVD---PKKAKARHGKIFVGGLSSEISDDEIRNF 511
++V+KA E+ ++ +A+ I+ + +VD KA +F+G L +I ++ +R
Sbjct: 16 YVVYKAAENANQAIASNGEEIDGFHIRVDLASNDKAHDHQRSVFIGNLPFDIEEEPLREL 75
Query: 512 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 631
F+ G + V + D+ KGF ++ FES+ V LK
Sbjct: 76 FTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALK 115
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 47.6 bits (108), Expect = 8e-06
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
++F+G + + + EL GEI ++ DP TG ++GFAF F S + +
Sbjct: 154 EVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAIT- 212
Query: 395 GEHTINNKKVDPKK----AKAR-HGKIFVGGLSSEISDDEIRNFFSEFGTILE 538
T+N+K + P + K+R + ++FV G+ S +EI FS+ T L+
Sbjct: 213 ---TLNDKDIRPGRRLAICKSRSNSRLFVKGIPKRKSKEEIFQEFSKVTTDLQ 262
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 607
++F+G + + +DE+ + G I E + D KGF F TF +
Sbjct: 154 EVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQ 204
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFIT 595
K+FVGG+ E DD +R FF++FG I E + D+ + KG+ F+T
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVT 57
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 379
KLFVGG+ +E+ D LR F +GEI V D T +S+G+ F+ ++ +
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAE 65
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 21/87 (24%)
Frame = +2
Query: 335 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA---------------------KARH 451
+GF F+ F+ P +I+ V+A H ++ K +DPK A A
Sbjct: 142 KGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRGPGQQAQTGAVMGGPQRGSAND 201
Query: 452 GKIFVGGLSSEISDDEIRNFFSEFGTI 532
GK+F+GGL+ ++++++ +FS +G +
Sbjct: 202 GKVFIGGLAFGTTEEDLKEYFSTYGMV 228
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = +2
Query: 197 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIE 295
G +D K+F+GGL++ TT+++L+++F YG +E
Sbjct: 197 GSANDGKVFIGGLAFGTTEEDLKEYFSTYGMVE 229
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +2
Query: 119 TTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIES 298
T DN+ +G+ ++ D D + + DDD GG + ++ +H A G +E+
Sbjct: 428 TGDNR-DGDDDDDDDDDDDDDDDDDDDDDDDDDDDGGGDDDDDYERGAINHSNA-GPLEN 485
Query: 299 INVKTDPNTGRSRGFAFIVFKAPESI 376
+ + TD NTG+ R F F+ F +P S+
Sbjct: 486 VRIPTDKNTGQQRSFGFVEFSSPVSV 511
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2
Query: 314 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 448
D T R RGF F+ F++ S DK H INNKKV+ KKA+ +
Sbjct: 5 DKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 551 FDKTKNQRKGFCFITFESE 607
FDK + +GF F+TFESE
Sbjct: 4 FDKATQRHRGFGFVTFESE 22
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 461 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 601
+VGGL+ E+ + + F FG I +V++P D T ++ +GF F+ FE
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFE 54
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 370
R +VGGL+ E +K L F +G+I + + D T + RGF F+ F+ E
Sbjct: 5 RVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAE 57
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Frame = +2
Query: 155 GGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 325
GGG+ P +D R LFVG L + ++LR F +G + +++K P
Sbjct: 215 GGGNFTPPQQEYIPPEEDPKATRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKR-PAR 273
Query: 326 GRSRGFAFIVFKAPESIDKVMAAGEHTI---NNKKVDPKKAKARHGKIFVGGLSSEISDD 496
G+ +AF+ F + K A + N+ K+ +++ + +++VGGL IS
Sbjct: 274 GQGNTYAFVKFADLDVAAKAKCAMQGQCIGRNHIKIGYGRSQ-QTTRLWVGGLGPWISIP 332
Query: 497 EIRNFFSEFGTILEVE 544
E+ F FG I ++
Sbjct: 333 ELEREFDRFGAIRRID 348
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 425 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 598
DPK + +FVG L + IS ++R F +FG +L+V++ + Q + F+ F
Sbjct: 232 DPKATRT----LFVGNLETGISCQDLRLSFEKFGVVLDVDIK-RPARGQGNTYAFVKF 284
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/112 (23%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Frame = +2
Query: 311 TDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNKKVDPKKAKA----RHGKIFVGGL 475
T P R R + V K+P K ++ + ++ P++ K + K++V L
Sbjct: 1106 TKPRPSR-RSLSKSVSKSPSPARKGKRSSSSSSSRSRSRSPRRRKRSPTPKPTKLYVAHL 1164
Query: 476 SSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 631
+ ++ D ++ FS +G + V++P D+T N +GF ++ + + LK
Sbjct: 1165 TRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALK 1216
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
KL+V L+ +++ F YG ++++++ TD SRGFA++ + PE +K +
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKAL 1215
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +2
Query: 416 KKVDPK--KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 589
KK+ PK + + G I++G + ++EI+ FF +FGT+ + + K + KG+ F
Sbjct: 84 KKIKPKGDEDELSPGVIYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAF 143
Query: 590 ITFESEQV 613
+ F ++V
Sbjct: 144 VEFACDEV 151
Score = 34.3 bits (75), Expect = 0.083
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK----LFVGGLSWETTDKE 259
N+ N +DI L+ + + + +D P D+D +++G + + E
Sbjct: 57 NSVNTTKDINATLALDSDKQK---EFEDKVKKIKPKGDEDELSPGVIYLGHIPHGFFENE 113
Query: 260 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH 403
++ F +G + I + + RS+G+AF+ F A + + K+ A H
Sbjct: 114 IKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEF-ACDEVAKIAADTMH 160
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 44.4 bits (100), Expect = 8e-05
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 394
L V + + TD+ R F A + + + +G S GF F+ + E K +
Sbjct: 49 LIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKL 108
Query: 395 GEHTINNK--KV---DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 559
TI NK KV P + ++V + ++ + E R F +G I+ + DK
Sbjct: 109 NGFTIGNKVLKVAFSRPGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDK 168
Query: 560 TKNQRKGFCFITFESE 607
+ KG F+ ++ +
Sbjct: 169 STGLPKGCGFVLYDKK 184
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 434 KAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 610
K++A G ++V + + + + I F + G + +V++ +D + Q KGFCF+T +++
Sbjct: 268 KSQAPPGCTLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQE 327
Query: 611 VVNDLLKT 634
+ ++T
Sbjct: 328 EAQNAIQT 335
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 194 PGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 358
PG D+ + L+V + + + E R F AYG I + + D +TG +G F+++
Sbjct: 125 PGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLY 181
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
D R +++ + L FG YG IE +++ TG+S+GF ++ ++ ES +
Sbjct: 61 DQRTIYIRDFRPDIRKSSLESVFGPYGAIEDLSI-IRTQTGKSKGFGYVTYENAESAQRA 119
Query: 386 MAAGEHTINNKKV--DPK 433
+ AG H I+ K V +PK
Sbjct: 120 L-AGTHIIDGKWVIAEPK 136
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 307
DDRKLFVG +S +++LR F +G IE + V
Sbjct: 212 DDRKLFVGMISKHAKEEDLRVMFSPFGTIEELTV 245
Score = 31.9 bits (69), Expect(2) = 1e-04
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 179 NSAEAPGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 337
N RD + KLFVG + +K+LR F YG+I + + D TG+ +
Sbjct: 158 NGGTTSVRDSNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
Score = 31.5 bits (68), Expect(2) = 1e-04
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTILEV 541
K+FVG +S ++++R FS FGTI E+
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEEL 243
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +2
Query: 194 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 373
P D L V L++ TT ++L+ F YG++ I + D NT SRGFAF+ F
Sbjct: 10 PEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRD 69
Query: 374 IDKVM 388
+ M
Sbjct: 70 AEDAM 74
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/59 (32%), Positives = 37/59 (62%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 631
+IF G L SE++D+ + F+++ + L+ ++ DK N+ KG+ F++F+ ND +K
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDP---NDFIK 273
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
+D ++F G L E TD+ L F Y + D + +S+G+ F+ FK P K
Sbjct: 215 NDFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKA 274
Query: 386 M 388
M
Sbjct: 275 M 275
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
++ K ++G L ++ + +L+D F Y ++ + V +D T R RGFAF+ F + ++++
Sbjct: 228 EECKCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDA 286
Query: 386 ---MAAGEHTINNKKVDPKKAKARHGKIFVGGLSS 481
+ E + KV+ +++ + G GG S
Sbjct: 287 INELDGQEFDGRSMKVNQARSREQRGGGRGGGYRS 321
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/58 (24%), Positives = 38/58 (65%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 628
K ++G L ++++ ++++ FS + +++V++ D+ + +GF F+TF S++ + D +
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRYD-VVDVQVISDRETQRPRGFAFVTFGSKKNMEDAI 287
Score = 35.1 bits (77), Expect = 0.048
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 296 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
S+ V TD TGR RGF F+ F + + +DK +
Sbjct: 37 SVKVITDRETGRPRGFGFVTFGSEDEMDKAI 67
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
++ + ++G LS+ ++ L + F ++ + V TD TGR RGF F+ F + E ++K
Sbjct: 3 EEYRCYIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKA 61
Query: 386 M 388
+
Sbjct: 62 I 62
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/52 (23%), Positives = 29/52 (55%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 610
+ ++G LS + + + F +++V++ D+ + +GF F+TF S++
Sbjct: 6 RCYIGNLSYSVDEQALEEKFHGCD-VVDVKVITDRETGRPRGFGFVTFGSKE 56
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
++VG L + T+ +L F YG++ + + D T SRG AFI+F +S +AA
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAA 70
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 41.5 bits (93), Expect = 6e-04
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = +2
Query: 458 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 610
+FVG + E S+++++ FSE G ++ + FD+ + KG+ F ++ ++
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQE 77
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 373
R +FVG + +E ++++L++ F G + S + D TG+ +G+ F +K E+
Sbjct: 25 RSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQET 78
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +2
Query: 146 AENGGGDSQDHNSAEAPGRD---DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTD 316
A + G +D + P D D LFV L+ TTD++L F +G I S V D
Sbjct: 95 ARSPNGLIRDDRIGDIPDADIKPPDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRD 154
Query: 317 PNTGRSRGFAFIVFKAPESIDK 382
TG S +AFI F+ E ++
Sbjct: 155 QKTGESLQYAFIEFEKDEDCER 176
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 458 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 610
+FV L+ +D+++ FS FGTIL E+ D+ + + FI FE ++
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDE 172
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 203 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAF 349
D K+F+GGL + ++++ ++GE+ + N+ D TG S+G+AF
Sbjct: 670 DSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAF 718
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 598
KIF+GGL + +++D+++ S FG + + D KG+ F +
Sbjct: 674 KIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEY 721
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +2
Query: 494 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 610
D ++ FSEFG +L V +P K + KGF FI FES+Q
Sbjct: 102 DWLKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQ 140
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +2
Query: 260 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK 436
L+ F +G++ +++ + G +GFAFI F++ + + V+ KK + ++
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFNRESKTKKEEKRE 162
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 397
L+VGGL + T+++LRDHF +GE+ SI++ N AF+ F + + + AA
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNC------AFVCFTSRAAAE---AAA 356
Query: 398 EHTINNKKVDPKKAKARHGK 457
+ + N + ++ K GK
Sbjct: 357 DRSFNKLILKGRRLKIMWGK 376
Score = 30.7 bits (66), Expect = 1.0
Identities = 9/30 (30%), Positives = 21/30 (70%)
Frame = +2
Query: 458 IFVGGLSSEISDDEIRNFFSEFGTILEVEM 547
++VGGL ++++ ++R+ F +FG + + M
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISM 335
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF----KAPESIDKV 385
LFVG L +E T+ + D YG IE + + TG S+G+ F+ + A ++ ++
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 386 MAAGEHTINNKKVDPKKAKAR-------HGK-IFVGGLSSEISDDE-IRNFFSEFGTILE 538
+ I + + A++ H + +FV L + + I+ FS+ G +
Sbjct: 175 LNTASKYIGGRILRVAFAESNLLTYADVHSRTLFVDRLPRDFKNGGLIKELFSQTGNVTF 234
Query: 539 VEMPFDKTKNQRKGFCFITFESEQ 610
++ + +GF F+ + + +
Sbjct: 235 AQVAINPANGGSRGFAFVDYATAE 258
Score = 35.5 bits (78), Expect = 0.036
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
R LFV L + + L ++ F G + V +P G SRGFAF+ + E +K
Sbjct: 205 RTLFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEK-- 262
Query: 389 AAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 532
G+ N ++V+ + +G G + I ++ N + + T+
Sbjct: 263 --GQRAHNGRQVEGSNIRVAYGS--PGRTGASILGSQLDNTQAGYTTV 306
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 22/126 (17%)
Frame = +2
Query: 299 INVKTDPNTGRSRGFAFIVF-------KAPESIDKVMAAGEHTINN---KKVDPKKAKAR 448
+ V DP +S+GF F+ F KA +D V G+ N +K +P + K
Sbjct: 542 VRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQTKPL 601
Query: 449 ------------HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 592
+ ++VG L ++ D E++ FS++G+ILE ++ D KG+ FI
Sbjct: 602 VWDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFAD------KGYAFI 655
Query: 593 TFESEQ 610
E+
Sbjct: 656 NARGEK 661
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 397
++VG L + D EL+ F YG I V D +G+AFI + + + + +
Sbjct: 617 VYVGNLPPDVKDYELQQMFSQYGSILETKVFAD------KGYAFINARGEKRRQRCLTSS 670
Query: 398 EHTINN 415
NN
Sbjct: 671 RRHGNN 676
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +2
Query: 140 GNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVK 310
GN GGG + + GRD + L V LS++TT L A+ + V
Sbjct: 262 GNTPRGGGRGRGGRGGFSGGRDQNPPNSSLIVRNLSYDTTTDSLG---AAFEGCSNAKVI 318
Query: 311 TDPNTGRSRGFAFIVFKAPESIDKVMA 391
D +G SRGF F+ + E+ KV++
Sbjct: 319 FDRESGESRGFGFVDYDDVETAKKVLS 345
Score = 35.1 bits (77), Expect = 0.048
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
++ +F+G LS++ ++ L F G + V T GRSRGF + F + E +K
Sbjct: 178 EEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVIT--QEGRSRGFGYADFTSKEDYNKA 235
Query: 386 MAA-GEHTINNK-KVDPKKAKARHG 454
+ GE + +++P +K G
Sbjct: 236 LELNGEDCCGREIRINPANSKPSRG 260
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/91 (25%), Positives = 39/91 (42%)
Frame = +2
Query: 359 KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 538
K S + + E T KK P K + +F+G LS + ++ + FF E G L
Sbjct: 152 KEESSSESDSDSDEETPTPKKTVPAKEEM---SVFLGNLSFDADEETLAAFFEEKG--LS 206
Query: 539 VEMPFDKTKNQRKGFCFITFESEQVVNDLLK 631
+ + +GF + F S++ N L+
Sbjct: 207 ATCRVITQEGRSRGFGYADFTSKEDYNKALE 237
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-ESIDK 382
+D +++VG L + +K+L D F YG I +++K G FAF+ F+ P ++ D
Sbjct: 259 NDCRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKN--RRGAGPPFAFVEFEDPRDAEDA 316
Query: 383 VMAAGEHTINNKKVDPKKAKARHGKIFVGG 472
V H + ++ + + G+ GG
Sbjct: 317 VKGRDGHEFDGYRIRVEFPRGGSGRGGGGG 346
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI---VFKAPESIDKVM 388
LFV + E + ++ + F YGEI++++V D TG +G+A + FK +S + +
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 389 AAGEHTINNKKVD 427
E N VD
Sbjct: 355 NGAEMLGQNISVD 367
Score = 34.7 bits (76), Expect = 0.063
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 458 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 604
+FV + E +D+I FS++G I + + D+ KG+ + +E+
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYET 343
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +2
Query: 275 GAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTIN--NKKVDPKKAKAR 448
GA+G + ++ + N ++ + KA E + V A + +K + K +
Sbjct: 20 GAHGLLGALEISPHENYQQNGNSS--TNKAREISNNVAALPIDLVGEVSKDISKYKVVSN 77
Query: 449 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 580
K+FVG + ++ E+++FF FG ++ ++ D+ K + KG
Sbjct: 78 KCKVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 340
K+FVG + ++ +EL+D FG +G++ + D RS+G
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Frame = +2
Query: 365 PESI-DKVMAAGEHTIN-NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 538
PE++ D+++ + ++N + D + K+FVGGL +I +DEI F FG+ L
Sbjct: 313 PENLADQIVPSLASSLNCSPNSDSEHIPRFSRKVFVGGLPPDIDEDEIHASFCRFGS-LT 371
Query: 539 VEMPF---DKTKNQRKGFCFITFESEQVVNDLL 628
V+ P K+ KG+ F+ + E V L+
Sbjct: 372 VDWPHKAESKSYFPPKGYAFLLYLEEISVQKLI 404
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGE--IESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
RK+FVGGL + + E+ F +G ++ + + +G+AF+++ S+ K+
Sbjct: 344 RKVFVGGLPPDIDEDEIHASFCRFGSLTVDWPHKAESKSYFPPKGYAFLLYLEEISVQKL 403
Query: 386 MAA 394
++A
Sbjct: 404 ISA 406
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 293 ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
E++N+ TD TGR RGF F+ F + E ++K +
Sbjct: 123 EAVNIITDRETGRPRGFGFVTFGSKEEMEKAI 154
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +2
Query: 209 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 373
+ + ++G LS+ ++ L + F ++ + V TD TGR RGF F+ +A ++
Sbjct: 81 EHRCYIGNLSYSVDEQALEEKFHDCNVVD-VRVITDRETGRPRGFGFVTLEAKKT 134
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = +2
Query: 443 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 610
A H + ++G LS + + + F + +++V + D+ + +GF F+T E+++
Sbjct: 80 AEH-RCYIGNLSYSVDEQALEEKFHDCN-VVDVRVITDRETGRPRGFGFVTLEAKK 133
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 188 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 358
+ G+ + + V LS ET + +L++ F G I I + D T +S+GFAFI F
Sbjct: 173 DGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF 229
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +2
Query: 191 APGRDD---DRKLFVGGLSWETTDKELRDHFGAYGEIESINVK---TDPNTGRSRGFAFI 352
AP DD +RKL++G L ++ + +GEIE PN G RG+ F+
Sbjct: 377 APEIDDAVSERKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFV 436
Query: 353 VFKAPESIDKVM 388
FK E K +
Sbjct: 437 EFKKKEDARKAL 448
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 634
++FVG + ++ +DE+ F G I EV + D Q +G+ F+ + S+ +KT
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMD-FNGQNRGYAFVVYTSKDDAKRCVKT 133
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
++FVG + + + EL F G I + + D N G++RG+AF+V+ + + + +
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFN-GQNRGYAFVVYTSKDDAKRCV-- 131
Query: 395 GEHTINNKKV 424
T+NN ++
Sbjct: 132 --KTLNNYEI 139
>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 35.5 bits (78), Expect = 0.036
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +2
Query: 173 DHNSAEAPGRDDDRK----LFVGGLSWETTDKELRDHFGAY--GEIESINVKTDPNTGRS 334
DHNS D + + GL +E++ ++L F I+ + K+ N G++
Sbjct: 316 DHNSDNGSNSQDQEATSTIVRMFGLPFESSKRDLYKFFNGLKIASIDLLKHKSGKNQGKN 375
Query: 335 RGFAFIVFKAPESIDKVMAAGEHTINNKKVD 427
G AF+VFK+ K + I ++ ++
Sbjct: 376 TGVAFVVFKSNNDASKALKMDRSYIGHRYIE 406
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 34.7 bits (76), Expect = 0.063
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTILEV 541
++F+G L S + D ++ FS++GTILE+
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILEI 386
Score = 23.8 bits (49), Expect(2) = 2.8
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESI 301
D ++F+G L D ++ + F YG I I
Sbjct: 355 DSHQVFIGNLPSGVKDADVNEVFSKYGTILEI 386
Score = 23.8 bits (49), Expect(2) = 2.8
Identities = 6/26 (23%), Positives = 17/26 (65%)
Frame = +2
Query: 335 RGFAFIVFKAPESIDKVMAAGEHTIN 412
+ F F++F + E + +++A +H ++
Sbjct: 425 KNFGFVIFSSAEPVQQILANKKHFLS 450
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 34.3 bits (75), Expect = 0.083
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 209 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 313
DR +FVG L K L+ +F YGE+ES+ ++
Sbjct: 20 DRTVFVGNLPLTLKKKALKKYFSKYGEVESVRFRS 54
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 34.3 bits (75), Expect = 0.083
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 458 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 619
+F+GGL I++ I F G I + + K +N RK FC + F +++ V+
Sbjct: 353 VFIGGLPESINEHIINEIFYVCGEITSIRISKGKGENARK-FCHLRFGAKESVD 405
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 379
R +F+GGL + + + F GEI SI + +R F + F A ES+D
Sbjct: 351 RTVFIGGLPESINEHIINEIFYVCGEITSIRISKGKGE-NARKFCHLRFGAKESVD 405
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 33.9 bits (74), Expect = 0.11
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
K++ G L T+K+L + +G++ ++ K G+A++VFK + D+ +AA
Sbjct: 4 KVYCGRLPATATEKDLENLVKVFGKVREVDFK--------EGYAYVVFKENKDADRAVAA 55
Query: 395 -GEHTINNKKVDPKKAK-ARHGKIFVGGLSS 481
+ K+ +KAK R+G VGG ++
Sbjct: 56 LNNSEFHGAKILMEKAKEMRNG---VGGYTA 83
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +2
Query: 422 VDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 601
VD K + +FV L EI+ + + +FFS G I + M D K R + +I F
Sbjct: 62 VDANKVEEIRRTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGKPTR--YAYIEFA 119
Query: 602 SEQVVNDLLK 631
Q + L+
Sbjct: 120 ETQAIVSALQ 129
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 494 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 598
++IR+ F ++GTI +V + DK + +G C++ F
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKF 71
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 254 KELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 433
+++R F YG IE + V D T +RG ++ F S +A E N DPK
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKASS--AALACEEMDGRNIGDDPK 94
Query: 434 KAK 442
K
Sbjct: 95 PIK 97
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = +2
Query: 164 DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 343
+++D + E G+ LFVG L ++ T +++ DHF G S + T S+G
Sbjct: 58 ETEDVITKEQDGKKQRYILFVGNLPFDLTTEKVLDHFRCAGS-SSFRLLTKKTDNSSKGC 116
Query: 344 AFIVFKAPESIDKVMAAGEHTINNKKVD 427
F+ K + + +K++
Sbjct: 117 GFLEIDDSIGYTKALNLHHSYLGGRKIN 144
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 200 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 358
R + K+++G L + +E+ + FG YG ++ + V +P GFAF +F
Sbjct: 28 RAEMTKVYIGSLGDNASKREIENEFGYYGPLKDVWVARNP-----PGFAFCIF 75
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 281 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 373
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.45
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 521 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 610
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 281 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 373
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.45
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 521 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 610
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/43 (27%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +2
Query: 458 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT-KNQRKGF 583
+++GGLS +++++ + F++FG + +V + D++ K+++ GF
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQSGF 568
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 31.1 bits (67), Expect = 0.78
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTD 316
++++G L + TT+ ++R F +YG + IN+K +
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNN 37
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 31.1 bits (67), Expect = 0.78
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYG-EIESINVKTDPNTG-------RSRGFAFIVFK 361
D K++ G L ++ T EL+ F A + + + +P RSRGF F+ F
Sbjct: 48 DPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFA 107
Query: 362 APESIDKVMAAGEHTINNKKVDPKKAK 442
PE + ++N K+V + K
Sbjct: 108 NPEDAQTAV----KSLNGKEVQGRTLK 130
>SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 95 NDNFAQDITTDNQLNGNAENGGGDSQDH-NSAEAPGRDDD 211
ND+ DI D+ NGN + G D+ D N E G DDD
Sbjct: 20 NDDDGDDIDDDDG-NGNGNDNGDDNDDDDNDDEGNGDDDD 58
>SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 218 LFVGGLSWETTDKE-LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
L+VGGL+ T +E L + FG +GEIE I + N AF+ +K+ ++ A
Sbjct: 249 LYVGGLTLHTKLEEWLWEEFGEWGEIEDIRIIPKKN------IAFVRYKS--RLNAEFAK 300
Query: 395 GEHTINNKKVD 427
G+ +++ VD
Sbjct: 301 GDCSLSGAIVD 311
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTD 316
L V GLS TT+++LR F YG +E+I + D
Sbjct: 183 LGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYD 215
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 155 GGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS 334
GGG N + G+D L + L +K+L++ YG + N++ D N G S
Sbjct: 104 GGGGGGMENDVASDGKD----LIIQNLPKGIQEKDLKELLQLYGNVLVCNIERDSN-GDS 158
Query: 335 RGFAFIVF 358
G A + F
Sbjct: 159 SGSALVRF 166
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 197 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 340
G R++ GL+ K L++ YG I++I V DP T +RG
Sbjct: 135 GTPPQREVLFSGLNDNVDKKFLQEICQKYGTIQTIKVYYDPQTKNTRG 182
>SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAE----NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKE 259
+ND D D+++NG + N GGD D + + DDD + G S++ D +
Sbjct: 58 DNDGGDDDDDDDDEVNGGNDDDDFNNGGDCDDDDDDDDDDDDDDDDINKKGASYDDDDDD 117
Query: 260 LRDHF 274
D +
Sbjct: 118 DDDGY 122
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKL--------FVGGLSWE 244
NN+N D +DN + N++N ++ D+N+ R D ++ ++ GL+WE
Sbjct: 613 NNNNNNNDNNSDNNSDNNSDNNSDNNSDNNNDNNSERGADPEIKRGKNPEGWIRGLNWE 671
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
NNDN + + +N N N N ++ D+NS + D
Sbjct: 597 NNDNNSDNNNNNNNNNNNNNNNNDNNSDNNSDNNSDNNSD 636
>SB_38604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +2
Query: 95 NDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHF 274
+DN D + N + +GG D D++S E DRK W + +
Sbjct: 117 DDNGEDDYDGNGDNNNDDNDGGDDDNDYDSNETMAFKKDRK------GWNNNGDDNENDT 170
Query: 275 GAYGEIESINVK 310
GE + +++K
Sbjct: 171 NTTGECDDVHIK 182
>SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
NN+N + +N N N N ++ D NS E DDD
Sbjct: 18 NNNNNNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDDDDDD 57
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +2
Query: 482 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 598
+ +D+++R+ F FG I V++ D + KG+ ++ F
Sbjct: 63 DFNDEDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKF 101
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 29.5 bits (63), Expect = 2.4
Identities = 25/113 (22%), Positives = 47/113 (41%)
Frame = +2
Query: 152 NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR 331
+GG S ++ + P ++L V + + D +LR FG++G I + + + G
Sbjct: 53 DGGSPSAENGDSSGP-----KRLHVTNIPFRFRDNDLRQMFGSFGVIADVEIIYN-ERGS 106
Query: 332 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEIS 490
F P ++ ++ G T N + KA+ + V G E+S
Sbjct: 107 KHAVRFPTRPNPLNL-RIEGFGFVTFNT-AAEANKAREKLNGTIVDGRKVEVS 157
>SB_8368| Best HMM Match : VWA (HMM E-Value=0)
Length = 771
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAY--GEIESINVKTDPNTGR-SRGFAFIVFKAPESIDKVM 388
LF + +TD ++ HF Y E+ ++N+K D + R RG FI S +K+
Sbjct: 167 LFYARIVMYSTDASVKMHFNKYSGAEMNNVNIKRDIDELRLERGLTFIDKALKISAEKLF 226
Query: 389 A-AGEHTINNKKV 424
+N KKV
Sbjct: 227 TEKNGMRLNRKKV 239
>SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAE-NGGGDSQDHNS 184
NND+ D T D+ N N + NGGG D+N+
Sbjct: 193 NNDDDDDDDTDDDDHNNNDDDNGGGGDDDNNN 224
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
NN N TT+N N N N D D + +DD
Sbjct: 173 NNINTTTTTTTNNNNNNNNNNNDDDDDDDTDDDDHNNNDD 212
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 95 NDNFAQDITTDNQLN-GNAENGGGDSQDHNS 184
+DNF DI+ D LN G A N + ++NS
Sbjct: 335 HDNFNDDISNDGNLNGGGANNNNNKNNNYNS 365
>SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05)
Length = 410
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +2
Query: 173 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGE 289
DH AP +L V GL WE D++L YGE
Sbjct: 69 DHLLQVAPAEVSRARLQVHGLPWEVPDEDLVALLSPYGE 107
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
+LFVG LS ET ++L + F YG++ ++KT + FI ++ P ++ M
Sbjct: 7 QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKT--------AYGFIEYEDPRDAEEAM 56
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
NN+N +I +N N N N ++ ++N+ + DDD
Sbjct: 112 NNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNDDDDDDDD 151
>SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2)
Length = 244
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 89 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
A N+ +A+ +T +N N N N ++ ++N+ DDD
Sbjct: 160 AINEKYAKIMTDNNNNNNNNNNNNNNNNNNNNNNNNNNDDD 200
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 28.7 bits (61), Expect = 4.1
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Frame = +2
Query: 173 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFG------AYGEI---ESINVKTDP-N 322
D N ++K+FV + +E+ + L+DH A+ EI E KT P +
Sbjct: 80 DTNRRSRSSGAPEKKVFVSNIPFESRWQNLKDHMNKVVGDVAFAEIFEDEKGRSKTRPED 139
Query: 323 TGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH---GKIFVGGLSSEISD 493
R A +S+ G ++ N +P K+ +FV L +++
Sbjct: 140 ENRMHRSRLRGNSASQSVGGT-GGGLPSLLNLSTNPMMKKSNDPAASTVFVTNLDYKVNW 198
Query: 494 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 604
++++ F G ++ E+ D K + KG + FE+
Sbjct: 199 QKLKDTFKCAGHVIRAEIMEDDEK-KSKGMGTVQFET 234
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 152 NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 313
NGG + D + A R++ +LFV GL E ++ +LR+ + I+ + +KT
Sbjct: 603 NGGKSTDDASDAAYELRNEGVELFVVGLGDENSEAQLRE-IASVPVIDHVFMKT 655
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +2
Query: 89 ANNDNFAQDITTDNQLNGNAENGGGD-SQDHNSAEAPGRDDDRKLFVGGLSWETTDKELR 265
+N+DN D +T N N N EN D S +NS + DD K + +D
Sbjct: 289 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNS 346
Query: 266 DHFGAYGEIESINVKTDPNTGRS 334
D+ + +PNT S
Sbjct: 347 DNSTSDNSNPDNLTSDNPNTDNS 369
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 89 ANNDNFAQDITTDNQLNGNAENGGGD-SQDHNSAEAPGRDDDRK 217
+N+DN D +T N N N EN D S +NS + DD K
Sbjct: 103 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSDDSK 144
>SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
++DN D DN NG+ ++ D D + +A DDD
Sbjct: 61 DSDNNYDDNDDDNDDNGDDDDNDDDDDDDDDDDADDDDDD 100
>SB_50597| Best HMM Match : 7tm_1 (HMM E-Value=2.59941e-42)
Length = 347
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 361 LKHNEGKPS*SACVWICLYINT---LYFTVCSKMITELLICGLPAQPTNKKFSVVIASWG 191
LK GK + A +W+ Y++ + F + + + LIC LP P+N F ++ +
Sbjct: 140 LKARGGKLT-IALIWVLTYLSVGFPMAFYMELTKVDDRLIC-LPKWPSNIVFKILTCFFI 197
Query: 190 LSTVMILRITATVLCISIK 134
++ L ITA I IK
Sbjct: 198 SLIIIPLCITAVAYIIMIK 216
>SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19)
Length = 486
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 173 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 307
D + EA R++ R ++VG +S ET ++ F YG IE + V
Sbjct: 358 DRSFREA-SREERRIVYVGKISDETHKDDVWRRFRKYGPIEKVTV 401
>SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 98 DNFAQDITTDNQLNGNAENGG-GDSQDHNSAEAPGRDDD 211
D + D D+ + + +N G GD D+ AE G DDD
Sbjct: 821 DYYYDDDDDDDDDDDDGDNDGDGDGDDYGDAENYGEDDD 859
>SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37)
Length = 599
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/30 (30%), Positives = 22/30 (73%)
Frame = +2
Query: 95 NDNFAQDITTDNQLNGNAENGGGDSQDHNS 184
ND+ A D++ ++ + G+ +NGG D+ ++++
Sbjct: 180 NDDSASDVSIEDIIYGDDDNGGDDNDNYDN 209
>SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 214 SVVIASWGLSTVMILRITATVLCISIKLV 128
++++ S G++ L ITAT+LC SI L+
Sbjct: 267 TILLESSGVTLPKALHITATILCYSISLL 295
>SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017)
Length = 691
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQD 175
+++++A D DN +NG+ ++GGGD D
Sbjct: 585 DDEDYAGD--GDNDVNGDGDSGGGDDDD 610
>SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5)
Length = 752
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 167 SQDHNSAEAPGRDD-DRKLFVGGLSWETTDKELRDHFGAYGEI 292
S DHN +PG DD +R++ L ++ + E+R Y EI
Sbjct: 113 SPDHNDLTSPGHDDNEREVIQDSLPIDSPENEVRLAAVLYTEI 155
>SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFG--AYGEIES---INVKTDPNTGRSRGFAFIVFKAPESI 376
++ +VG LS + T ++L HFG A + S + + + +G+S GF F+ P+ +
Sbjct: 5 KRFYVGNLSVKATREDLSHHFGLDATPYLRSSCWVELAVE-KSGKSLGFGFV--NVPKHL 61
Query: 377 -DKVMAAGEHTINNKKVDPKKAKAR 448
D +M + + +K++ + A+ +
Sbjct: 62 ADHLMHLNQTKLFDKRITIEPARGK 86
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
+N+N +DI N EN GG+S + N + DD+
Sbjct: 147 SNNNEDEDIQEVEDDNEGKENDGGESDEENDDDDEDGDDE 186
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGN--AENGGGDSQDHN 181
NNDN+ + DN N N NG DS D+N
Sbjct: 90 NNDNYDNNGNNDNNDNYNNYDNNGNNDSNDNN 121
>SB_1065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +2
Query: 101 NFAQDITTDNQLNGNAENGGGDSQDHNSAE-APGRDDDRKLFVGGLSWETTDKELRDHFG 277
N+ DI D+ N N +N D DH E DDD + + + T ++ RD
Sbjct: 51 NYDDDIDDDDYDNDN-DNYDDDDDDHKYEEDDDDDDDDDDMMMVMMMIHTGHQQHRDRQE 109
Query: 278 AYGEIESINVKTDPNTGRS 334
+G E N D N +
Sbjct: 110 DHGVQEDPNNDNDNNNNNN 128
>SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 254 YLWSPSSAHQQKVFCRHRVLGPQH 183
YLW+PS Q +V R+R G H
Sbjct: 143 YLWTPSGLSQSQVRSRNRANGTTH 166
>SB_56231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGG 232
++D D D+ + G+ ++ GD D + + G DDD + GG
Sbjct: 248 DDDGEVDDAGGDDGVGGDNDDDRGDDGDDDEDDDRGNDDDEDDWGGG 294
>SB_43316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 326 LCLDLSLH*YSLFHRMLQNDHGAPYLWSPSSAHQQKV 216
L +D LH Y F+R L D+ A Y W S +++V
Sbjct: 153 LIVDTGLH-YQGFNRSLALDYFAKYAWDTSDGAEKEV 188
>SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
NN+N + +N N N N D D + + DDD
Sbjct: 87 NNNNNNNNNNNNNNNNNNNNNNNNDDDDDDDDDDDDNDDD 126
>SB_23339| Best HMM Match : I-set (HMM E-Value=1.3e-07)
Length = 423
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
NN N ++ DN + +A+N D D+N+ + G DD
Sbjct: 14 NNGNDDENNYNDNHNDKDADNKNNDDGDNNNNDKCGYKDD 53
>SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGN--AENGGGDSQDHN 181
NNDN+ + DN N + NG DS D+N
Sbjct: 192 NNDNYDNNDNNDNNDNNDNYDNNGNNDSNDNN 223
>SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 125 DNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
DN + + ++GGGD D N + G DDD
Sbjct: 92 DNDDSNDVDDGGGDGDDDNDGD--GVDDD 118
>SB_15580| Best HMM Match : Pentapeptide (HMM E-Value=0.2)
Length = 610
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 89 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEA 193
ANN N A + N N NA N ++ + N+A A
Sbjct: 254 ANNANNANNANNANANNANANNANANNANANNANA 288
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,899,025
Number of Sequences: 59808
Number of extensions: 408639
Number of successful extensions: 2714
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2480
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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