Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19a22
(669 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12920.1 68416.m01610 expressed protein 37 0.014
At5g19080.1 68418.m02268 zinc finger (C3HC4-type RING finger) fa... 36 0.018
At5g47050.1 68418.m05798 expressed protein 36 0.024
At4g19700.1 68417.m02893 expressed protein 36 0.024
At1g12760.1 68414.m01481 zinc finger (C3HC4-type RING finger) fa... 36 0.024
At1g60610.2 68414.m06823 expressed protein 36 0.032
At1g60610.1 68414.m06822 expressed protein 36 0.032
At1g59560.1 68414.m06698 expressed protein contains similarity t... 35 0.043
At5g45100.2 68418.m05534 expressed protein 35 0.056
At5g45100.1 68418.m05533 expressed protein 35 0.056
At3g06140.1 68416.m00705 zinc finger (C3HC4-type RING finger) fa... 35 0.056
At1g63900.1 68414.m07235 zinc finger (C3HC4-type RING finger) fa... 35 0.056
At1g63170.1 68414.m07139 zinc finger (C3HC4-type RING finger) fa... 35 0.056
At1g79110.2 68414.m09225 expressed protein 34 0.098
At1g79110.1 68414.m09224 expressed protein 34 0.098
At4g27880.1 68417.m04002 seven in absentia (SINA) family protein... 33 0.13
At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger) fa... 33 0.13
At4g31450.1 68417.m04469 zinc finger (C3HC4-type RING finger) fa... 33 0.17
At3g09770.1 68416.m01157 zinc finger (C3HC4-type RING finger) fa... 33 0.17
At2g39810.1 68415.m04890 expressed protein 33 0.17
At4g11680.1 68417.m01866 zinc finger (C3HC4-type RING finger) fa... 33 0.23
At5g03200.1 68418.m00268 zinc finger (C3HC4-type RING finger) fa... 32 0.30
At3g18773.1 68416.m02383 zinc finger (C3HC4-type RING finger) fa... 32 0.30
At1g45976.1 68414.m05206 expressed protein 32 0.30
At5g04460.1 68418.m00443 expressed protein 32 0.40
At1g10650.1 68414.m01207 expressed protein 32 0.40
At4g17680.1 68417.m02641 expressed protein 31 0.52
At1g49220.1 68414.m05518 zinc finger (C3HC4-type RING finger) fa... 31 0.52
At4g35070.1 68417.m04978 expressed protein 31 0.69
At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger) fa... 31 0.69
At5g64970.1 68418.m08172 mitochondrial substrate carrier family ... 31 0.92
At4g03000.2 68417.m00408 expressed protein contains similarity t... 31 0.92
At4g03000.1 68417.m00407 expressed protein contains similarity t... 31 0.92
At3g53410.1 68416.m05894 zinc finger (C3HC4-type RING finger) fa... 31 0.92
At1g80400.1 68414.m09412 zinc finger (C3HC4-type RING finger) fa... 31 0.92
At1g19680.1 68414.m02453 expressed protein 31 0.92
At4g32600.1 68417.m04642 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc f... 30 1.6
At3g58040.1 68416.m06470 seven in absentia (SINA) family protein... 30 1.6
At2g01735.1 68415.m00102 zinc finger (C3HC4-type RING finger) fa... 30 1.6
At5g11010.3 68418.m01286 pre-mRNA cleavage complex-related low s... 29 2.1
At5g11010.2 68418.m01285 pre-mRNA cleavage complex-related low s... 29 2.1
At5g11010.1 68418.m01284 pre-mRNA cleavage complex-related low s... 29 2.1
At4g39050.1 68417.m05531 kinesin-related protein (MKRP2) kinesin... 29 2.1
At2g41980.1 68415.m05193 seven in absentia (SINA) family protein... 29 2.1
At2g21380.1 68415.m02544 kinesin motor protein-related 29 2.1
At1g73760.1 68414.m08540 zinc finger (C3HC4-type RING finger) fa... 29 2.1
At1g30860.1 68414.m03774 expressed protein 29 2.1
At2g04240.2 68415.m00413 zinc finger (C3HC4-type RING finger) fa... 29 2.8
At2g04240.1 68415.m00412 zinc finger (C3HC4-type RING finger) fa... 29 2.8
At1g17145.1 68414.m02090 expressed protein 29 2.8
At1g14910.1 68414.m01782 epsin N-terminal homology (ENTH) domain... 29 2.8
At5g42940.1 68418.m05235 zinc finger (C3HC4-type RING finger) fa... 29 3.7
At5g01450.1 68418.m00058 expressed protein 29 3.7
At3g47990.1 68416.m05232 zinc finger (C3HC4-type RING finger) fa... 29 3.7
At3g17500.1 68416.m02235 F-box family protein contains Pfam prof... 29 3.7
At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger) fa... 29 3.7
At1g49210.1 68414.m05517 zinc finger (C3HC4-type RING finger) fa... 29 3.7
At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM dom... 29 3.7
At5g44690.1 68418.m05476 hypothetical protein 28 4.9
At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger) fa... 28 4.9
At3g61180.1 68416.m06847 zinc finger (C3HC4-type RING finger) fa... 28 4.9
At1g73950.1 68414.m08564 zinc finger (C3HC4-type RING finger) fa... 28 4.9
At1g18470.1 68414.m02304 zinc finger (C3HC4-type RING finger) fa... 28 4.9
At1g78420.1 68414.m09138 expressed protein 28 6.5
At1g53310.1 68414.m06042 phosphoenolpyruvate carboxylase, putati... 28 6.5
At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger) fa... 28 6.5
At5g24870.2 68418.m02943 zinc finger (C3HC4-type RING finger) fa... 27 8.5
At5g24870.1 68418.m02942 zinc finger (C3HC4-type RING finger) fa... 27 8.5
At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) fa... 27 8.5
At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) fa... 27 8.5
At1g68070.1 68414.m07776 zinc finger (C3HC4-type RING finger) fa... 27 8.5
At1g49200.1 68414.m05516 zinc finger (C3HC4-type RING finger) fa... 27 8.5
At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger) fa... 27 8.5
>At3g12920.1 68416.m01610 expressed protein
Length = 335
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +3
Query: 330 SACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
S C C + A +V L C H CLC+ C ++ NTCP CKS
Sbjct: 285 SMCRSCGKGEA---SVLLLPCRHMCLCSVCGSSL---NTCPICKS 323
>At5g19080.1 68418.m02268 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 378
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +3
Query: 225 RRVIDFAGIRNKTLEIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSC 404
++++ G R + E+ D ++ T + D+ C + C H C
Sbjct: 282 KQILWIEGERYELQELYGIDNSITQGTAAS-GLEDTGGKECVICLTEPKDTAVMPCRHLC 340
Query: 405 LCTDCDETVNVD-NTCPKCKSGIRYKLKYK 491
LC+DC E + N CP C+ I +K K
Sbjct: 341 LCSDCAEELRFQTNKCPICRQPIHELVKIK 370
>At5g47050.1 68418.m05798 expressed protein
Length = 300
Score = 35.9 bits (79), Expect = 0.024
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 315 VKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
V+ + C CRR A V L C H +CT+CD +V + CP C S
Sbjct: 246 VEMIGPGCRICRRRSAT---VLALPCRHLVMCTECDGSVRI---CPLCLS 289
>At4g19700.1 68417.m02893 expressed protein
Length = 304
Score = 35.9 bits (79), Expect = 0.024
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +3
Query: 315 VKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKC 458
V AV C RC A +V L C H CLCT C + + TCP C
Sbjct: 247 VTAVGGGCKRCGEREA---SVLVLPCRHLCLCTVCGGSALL-RTCPVC 290
>At1g12760.1 68414.m01481 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q9NVW2 RING finger
protein 12 (LIM domain interacting RING finger protein)
{Homo sapiens}; contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 35.9 bits (79), Expect = 0.024
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +3
Query: 261 TLEIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVD 440
T E I T+ E + D+ C C ++ + L CGH C+ D+ + ++
Sbjct: 288 TTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYIN 347
Query: 441 NTCPKCKSGI 470
TCP CK I
Sbjct: 348 ATCPLCKYNI 357
>At1g60610.2 68414.m06823 expressed protein
Length = 340
Score = 35.5 bits (78), Expect = 0.032
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 312 NVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
N+ + S MRC+ +V + C H LC DCD V CP C+S
Sbjct: 282 NIPGMPSTGMRCKLCNVKNVSVLLVPCRHLSLCKDCDVFTGV---CPVCQS 329
>At1g60610.1 68414.m06822 expressed protein
Length = 340
Score = 35.5 bits (78), Expect = 0.032
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 312 NVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
N+ + S MRC+ +V + C H LC DCD V CP C+S
Sbjct: 282 NIPGMPSTGMRCKLCNVKNVSVLLVPCRHLSLCKDCDVFTGV---CPVCQS 329
>At1g59560.1 68414.m06698 expressed protein contains similarity to
apoptosis inhibitors
Length = 338
Score = 35.1 bits (77), Expect = 0.043
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 381 YLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLK 485
++ CGH C CT C + TCP C+ I+ LK
Sbjct: 303 FVECGHMCCCTPCSLQL---RTCPLCRERIQQVLK 334
>At5g45100.2 68418.m05534 expressed protein
Length = 267
Score = 34.7 bits (76), Expect = 0.056
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +3
Query: 324 VDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKC 458
V+ C RC A +V L C H CLCT C + + TCP C
Sbjct: 213 VNGGCKRCGELTA---SVLVLPCRHLCLCTVCGSSALL-RTCPVC 253
>At5g45100.1 68418.m05533 expressed protein
Length = 294
Score = 34.7 bits (76), Expect = 0.056
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +3
Query: 324 VDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKC 458
V+ C RC A +V L C H CLCT C + + TCP C
Sbjct: 240 VNGGCKRCGELTA---SVLVLPCRHLCLCTVCGSSALL-RTCPVC 280
>At3g06140.1 68416.m00705 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 359
Score = 34.7 bits (76), Expect = 0.056
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 384 LHCGHSCLCTDCDETVNV-DNTCPKCKSGIRYKLKYK 491
L C H C+C+DC + + + N CP C+ I L+ K
Sbjct: 315 LPCRHLCMCSDCAKELRLQSNKCPICRQPIEELLEIK 351
>At1g63900.1 68414.m07235 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 343
Score = 34.7 bits (76), Expect = 0.056
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Frame = +3
Query: 213 RRYNRRVIDFAGIRNKT-LEIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLH 389
R+ +RV+D A R + E R ++ AV C+ C Y AV ++
Sbjct: 254 RQLQKRVLDAAAKRAELESEGSNGTRESISDSTKKEDAVPDLCVICLEQ--EYNAV-FVP 310
Query: 390 CGHSCLCTDCDETVNVDNTCPKCKSGIRYKLKYKTL*H 503
CGH C CT C + +CP C+ R L KT H
Sbjct: 311 CGHMCCCTACSSHL---TSCPLCRR--RIDLAVKTYRH 343
>At1g63170.1 68414.m07139 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q06003 Goliath
protein (G1 protein) {Drosophila melanogaster}; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 381
Score = 34.7 bits (76), Expect = 0.056
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 327 DSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLKYK 491
D+ C C ++ + L CGH C D+ + ++ TCP CK I Y+
Sbjct: 322 DAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNILKSSNYE 376
>At1g79110.2 68414.m09225 expressed protein
Length = 355
Score = 33.9 bits (74), Expect = 0.098
Identities = 21/60 (35%), Positives = 24/60 (40%)
Frame = +3
Query: 285 RNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
R + L E KA CR V L C H CLC C +V +TCP C S
Sbjct: 287 RRVGLEREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSV---HTCPICTS 343
>At1g79110.1 68414.m09224 expressed protein
Length = 358
Score = 33.9 bits (74), Expect = 0.098
Identities = 21/60 (35%), Positives = 24/60 (40%)
Frame = +3
Query: 285 RNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
R + L E KA CR V L C H CLC C +V +TCP C S
Sbjct: 290 RRVGLEREAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSV---HTCPICTS 346
>At4g27880.1 68417.m04002 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 327
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 354 SFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCK 461
++++YP + H GH+ LC+ C V V N CP C+
Sbjct: 68 TYSMYPPIHQCHNGHT-LCSTC--KVRVHNRCPTCR 100
>At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHG1a
GI:3822225 from [Arabidopsis thaliana]; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 494
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 336 CMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
C C+ SF + L CGH ++ + V N CP CKS
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKS 484
>At4g31450.1 68417.m04469 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 497
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 327 DSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
D+ C C+ + + V LHC H+ E + + + CP CK+
Sbjct: 445 DAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICKA 490
>At3g09770.1 68416.m01157 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 388
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 378 TYLHCGHSCLCTDCDETVNVD-NTCPKCKSGIRYKLKYK 491
T L C H C+C+ C + + N CP C+ + L+ K
Sbjct: 330 TVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEIK 368
>At2g39810.1 68415.m04890 expressed protein
Length = 865
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 267 EIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYL--HCGHSCLCTDCDETVNVD 440
E +K ++ L CN V+ C R + V Y+ CGH+ LCT+C + +V
Sbjct: 31 EALKHLASINLRELCNEAKVER-CRATRDLASCGRFVNYVLNPCGHASLCTECCQRCDV- 88
Query: 441 NTCPKCKS 464
CP C+S
Sbjct: 89 --CPICRS 94
>At4g11680.1 68417.m01866 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q9WTV7 RING finger
protein 12 (LIM domain interacting RING finger protein)
{Mus musculus}; contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 390
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 306 ECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 470
E ++ D+ C C + + L C H CT D+ +++++ CP CK I
Sbjct: 328 ERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNI 382
>At5g03200.1 68418.m00268 zinc finger (C3HC4-type RING finger)
family protein contains weak similarity to zinc finger
proteins
Length = 337
Score = 32.3 bits (70), Expect = 0.30
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 378 TYLHCGHSCLCTDCDETVNVD-NTCPKCKSGIRYKLK 485
T L C H C+C+ C + + N CP C+ + L+
Sbjct: 296 TVLPCRHMCMCSGCAKALRFQTNLCPVCRQPVEMLLE 332
>At3g18773.1 68416.m02383 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 220
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 246 GIRNKTLEIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYL-HCGHSCLCTDCD 422
GI+ K L+++ P E N+ V C+ C F + L C H D
Sbjct: 103 GIKKKALKMLPVVNYSP---EINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCID 159
Query: 423 ETVNVDNTCPKCK 461
+ + TCPKC+
Sbjct: 160 KWLTQHMTCPKCR 172
>At1g45976.1 68414.m05206 expressed protein
Length = 325
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 339 MRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
M CR + L C H CLC +C+ + ++CP C+S
Sbjct: 277 MMCRFCGVREMCMLLLPCNHMCLCKECERKL---SSCPLCQS 315
>At5g04460.1 68418.m00443 expressed protein
Length = 863
Score = 31.9 bits (69), Expect = 0.40
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 390 CGHSCLCTDC-DETVNVDNTCPKCKSGI 470
CGH C C+ C +E V CP C++ I
Sbjct: 826 CGHMCTCSKCANELVRNGGKCPLCRAPI 853
>At1g10650.1 68414.m01207 expressed protein
Length = 339
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 339 MRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
MRC+ +V + C H LC +CD + CP CKS
Sbjct: 290 MRCKMCNVKEVSVLIVPCRHLSLCKECDVFTKI---CPVCKS 328
>At4g17680.1 68417.m02641 expressed protein
Length = 314
Score = 31.5 bits (68), Expect = 0.52
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 315 VKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKC 458
++ + +C CRR A A L C H LC CD V CP C
Sbjct: 260 IELIGPSCRICRRKSATVMA---LPCQHLILCNGCD--VGAVRVCPIC 302
>At1g49220.1 68414.m05518 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 251
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 246 GIRNKTLEIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYL-HCGHSCLCTDCD 422
GI+ K L + P E N+ +D C+ C F + L C H D
Sbjct: 108 GIKKKALRMFPVVSYSP---EMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCID 164
Query: 423 ETVNVDNTCPKCKS 464
+ + TCPKC++
Sbjct: 165 KWLQQHLTCPKCRN 178
>At4g35070.1 68417.m04978 expressed protein
Length = 265
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 324 VDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
+ S C C + V +L C H C C DC+E + + CP C +
Sbjct: 213 MSSCCCNCGSNGVT--RVLFLPCRHLCCCMDCEEGLLL---CPICNT 254
>At1g17970.1 68414.m02223 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 368
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 324 VDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCK 461
VD C C+ + V L+CGHS + ++ N CP CK
Sbjct: 316 VDRKCSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCK 361
>At5g64970.1 68418.m08172 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 428
Score = 30.7 bits (66), Expect = 0.92
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = -2
Query: 296 RQVSVGLNDFQRFVANARKVNYTSVVAPHREHLAAVPIDGRVVQRR*RASQNSKRLRLNA 117
+Q LN F + + +A A P + VV+RR + ++KRL A
Sbjct: 322 KQEGEELNAFDQLELGPMRTLLYGAIAGACSEAATYPFE--VVRRRLQMQSHAKRLSAVA 379
Query: 116 TVVHVVERGG 87
T V ++E+GG
Sbjct: 380 TCVKIIEQGG 389
>At4g03000.2 68417.m00408 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 30.7 bits (66), Expect = 0.92
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 372 AVTYLHCGHSCLCTDCDETVNVD--NTCPKCKSGIRYKLK 485
+V +L C H LC+ C++ + CP C++ I+ +++
Sbjct: 769 SVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQRRIQ 808
>At4g03000.1 68417.m00407 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 30.7 bits (66), Expect = 0.92
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 372 AVTYLHCGHSCLCTDCDETVNVD--NTCPKCKSGIRYKLK 485
+V +L C H LC+ C++ + CP C++ I+ +++
Sbjct: 769 SVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKIQRRIQ 808
>At3g53410.1 68416.m05894 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 299
Score = 30.7 bits (66), Expect = 0.92
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 378 TYLHCGHSCLCTDCDETVNVD-NTCPKCKSGI 470
T L C H C+C+ C + + N CP C+ +
Sbjct: 254 TVLPCRHMCMCSGCAKLLRFQTNLCPICRQPV 285
>At1g80400.1 68414.m09412 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|Q90972 RING finger
protein 13 {Gallus gallus}; contains Pfam profile:
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 407
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 315 VKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDC-DETVNVDNTCPKCKSGI 470
+ D++C C + V L C H DC D+ + ++ TCP CK+ +
Sbjct: 348 ISGEDASCCICLTRYGDDEQVRELPCSH-VFHVDCVDKWLKINATCPLCKNEV 399
>At1g19680.1 68414.m02453 expressed protein
Length = 444
Score = 30.7 bits (66), Expect = 0.92
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Frame = +3
Query: 369 PAVTYLHCGH----SCLCTDCDETVNVDNTCPKCKSGIRYKLKYKTL 497
P L CGH +CL T +ET D TCP C KL K L
Sbjct: 292 PIPAVLACGHVYHAACLETMTNETEKYDPTCPICTETQVTKLSRKAL 338
>At4g32600.1 68417.m04642 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING finger protein 38
[Homo sapiens] GI:21666412; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +3
Query: 300 NTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYK 479
+ E + D+ C C +A + L C H D+ + ++ +CP CKS + K
Sbjct: 351 DNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEK 410
>At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc
finger (C3HC4-type RING finger) family protein (BRCA1)
contains Pfam profiles PF00533: BRCA1 C Terminus (BRCT)
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01535: PPR repeat; identical to cDNA BRCA1 GI:28372473
Length = 1276
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 339 MRCRRSFAVYPAVTYLHCGHSCLCTDCD-ETVNVDNTCPKCK 461
++C ++Y + L C H C C +++ +D TCP CK
Sbjct: 349 LKCPICLSLYNSAVSLSCNH-VFCNACIVKSMKMDATCPVCK 389
>At3g58040.1 68416.m06470 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 308
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 363 VYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCK 461
+YP + GH+ LC++C + V NTCP C+
Sbjct: 67 MYPPIHQCPNGHT-LCSNCK--LRVQNTCPTCR 96
>At2g01735.1 68415.m00102 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger) domain
Length = 359
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +3
Query: 291 LPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 470
L L TE + A D+ C C S+ + L C H T + + + TCP CK I
Sbjct: 292 LCLATERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351
>At5g11010.3 68418.m01286 pre-mRNA cleavage complex-related low
similarity to SP|Q92989 Pre-mRNA cleavage complex II
protein Clp1 {Homo sapiens}
Length = 368
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 511 YEMVISVLVYLSPAQILNLNLPLAYQKSV 597
YE+++ VL Y+SP+ ++ +N+ AY K++
Sbjct: 158 YELLVDVLRYVSPSHVVKINIS-AYNKNL 185
>At5g11010.2 68418.m01285 pre-mRNA cleavage complex-related low
similarity to SP|Q92989 Pre-mRNA cleavage complex II
protein Clp1 {Homo sapiens}
Length = 368
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 511 YEMVISVLVYLSPAQILNLNLPLAYQKSV 597
YE+++ VL Y+SP+ ++ +N+ AY K++
Sbjct: 158 YELLVDVLRYVSPSHVVKINIS-AYNKNL 185
>At5g11010.1 68418.m01284 pre-mRNA cleavage complex-related low
similarity to SP|Q92989 Pre-mRNA cleavage complex II
protein Clp1 {Homo sapiens}
Length = 318
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 511 YEMVISVLVYLSPAQILNLNLPLAYQKSV 597
YE+++ VL Y+SP+ ++ +N+ AY K++
Sbjct: 158 YELLVDVLRYVSPSHVVKINIS-AYNKNL 185
>At4g39050.1 68417.m05531 kinesin-related protein (MKRP2) kinesin
motor protein - Ustilago maydis, PID:g2062750; identical
to cDNA MKRP2 mRNA for kinesin-related protein
GI:16902293, kinesin-related protein [Arabidopsis
thaliana] GI:16902294
Length = 1055
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 345 CRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKL 482
C+ F A L C H CLC C + CP C++ I +L
Sbjct: 1008 CKVCFESPTAAILLPCRHFCLCKSCSLAC---SECPICRTKISDRL 1050
>At2g41980.1 68415.m05193 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 305
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 363 VYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCK 461
+YP + GH+ LC+ C + V NTCP C+
Sbjct: 64 MYPPIHQCPNGHT-LCSSCK--LRVQNTCPTCR 93
>At2g21380.1 68415.m02544 kinesin motor protein-related
Length = 1058
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 345 CRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKL 482
C+ F A L C H CLC C + CP C++ I +L
Sbjct: 1011 CKVCFESPTATILLPCRHFCLCKSCSLAC---SECPICRTKISDRL 1053
>At1g73760.1 68414.m08540 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 367
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 327 DSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
D C+ C+ + V L CGH ++ + N+CP CK+
Sbjct: 316 DRKCIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCKT 361
>At1g30860.1 68414.m03774 expressed protein
Length = 730
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 372 AVTYLHCGHSCLCTDCDETVN-VDNTCPKCKSGI 470
AV Y CGH C+C C ++ CP C++ I
Sbjct: 686 AVLY-RCGHMCMCLKCANELHWSGGKCPICRAQI 718
>At2g04240.2 68415.m00413 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 162
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 318 KAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDN-TCPKCKS 464
K D+ C C F + L CGH T ++ ++ N TCP C++
Sbjct: 97 KQADNECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRT 146
>At2g04240.1 68415.m00412 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 162
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 318 KAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDN-TCPKCKS 464
K D+ C C F + L CGH T ++ ++ N TCP C++
Sbjct: 97 KQADNECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRT 146
>At1g17145.1 68414.m02090 expressed protein
Length = 335
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +3
Query: 345 CRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT-----CPKCKSGIRYKLKYK 491
C F YP++ C +CT+C + N+ CP CK+ Y ++Y+
Sbjct: 63 CPICFLYYPSLNRSRCCMKSICTECFLRMKSPNSAQPTQCPFCKTS-NYAVEYR 115
>At1g14910.1 68414.m01782 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain A, Calm-N N-Terminal Domain Of Clathrin
Assembly Lymphoid Myeloid Leukaemia Protein, Pi(4,5)p2
Complex (GP:13399999) {Homo sapiens}
Length = 692
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 332 CMHALQKKFRSLPRRYLSALRTFVFVHRLRRNG 430
C+HAL ++ R + AL+ + +HRL R+G
Sbjct: 71 CIHALSRRLHKT-RNWTVALKALLVIHRLLRDG 102
>At5g42940.1 68418.m05235 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 691
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = +3
Query: 246 GIRNKTLEIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDE 425
G+ +T+ R NT+ A C C+ + + L CGH E
Sbjct: 609 GVNEETISNRLKQRKYKSNTKSPQDA--EPCCVCQEEYTEGEDMGTLECGHEFHSQCIKE 666
Query: 426 TVNVDNTCPKCKS 464
+ N CP CK+
Sbjct: 667 WLKQKNLCPICKT 679
>At5g01450.1 68418.m00058 expressed protein
Length = 444
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +3
Query: 381 YLHCGHSCLCTDCDETV-NVDNTCPKCKSGIR 473
+L CGH C C + CP C+ IR
Sbjct: 405 FLSCGHCVACFQCGTRIAETSGFCPVCRKKIR 436
>At3g47990.1 68416.m05232 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 358
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +3
Query: 336 CMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 470
C+ C F + V L C H+ D+ + ++ CP+C+ +
Sbjct: 235 CLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSV 279
>At3g17500.1 68416.m02235 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 438
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 387 HCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLKYKT 494
HC LCT D+ + V N C +++ + YKT
Sbjct: 98 HCDGLLLCTTKDDRLEVWNPCTGQTRRVQHSIHYKT 133
>At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 248
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 273 IKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCP 452
I+ R + + E VK + C C+ F V L C H + +N+ NTCP
Sbjct: 119 IEAVRTVIITDEDLVK--EKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCP 176
Query: 453 KCK 461
C+
Sbjct: 177 ICR 179
>At1g49210.1 68414.m05517 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 225
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +3
Query: 246 GIRNKTLEIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYL-HCGHSCLCTDCD 422
GI+ K L + + + E N+ + C+ C F + L C H D
Sbjct: 108 GIKKKALRMFPV---VSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCID 164
Query: 423 ETVNVDNTCPKCK 461
+ + TCPKC+
Sbjct: 165 KWLQHHLTCPKCR 177
>At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM
domain-containing protein contains Pfam profiles
PF00168: C2 domain; contains PF02893: GRAM domain;
similar to Chain A, Crystal Structure Of Synaptotagmin
Iii C2aC2B Length(GI:6980525); similar to Synaptotagmin
III (SytIII) (Swiss-Prot:P40748) [Rattus norvegicus]
Length = 1859
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 372 AVTYLHCGHSCLCTDCDETVNVDN--TCPKCKSGIRYKLK 485
+V +L C H LC C++ + CP C+ I +++
Sbjct: 777 SVIFLPCAHQVLCFKCNQLHEKEGMMDCPSCRGTIHRRIQ 816
>At5g44690.1 68418.m05476 hypothetical protein
Length = 684
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +3
Query: 327 DSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDN-TCPKCKSGI 470
DS C F + CGH C C C + N CP C + I
Sbjct: 626 DSLERNCSICFEMPIDSLLYRCGHMCTCLKCAHELQWSNMKCPICMAPI 674
>At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 159
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 390 CGHSCLCTDC-DETVNVDNTCPKCKS 464
C H C TDC DE + TCP C++
Sbjct: 113 CNH-CFHTDCVDEWLRTSATCPLCRN 137
>At3g61180.1 68416.m06847 zinc finger (C3HC4-type RING finger)
family protein low similarity to RNF6 protein [Mus
musculus] GI:20530241; contains Pfam profile PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 379
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +3
Query: 273 IKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCP 452
I T + TE + + D+ C C ++ + L C H D+ + ++ TCP
Sbjct: 302 IMTGLDTESQTERMLLSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCP 361
Query: 453 KCKSGI 470
CK I
Sbjct: 362 LCKFNI 367
>At1g73950.1 68414.m08564 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 466
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 345 CRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKL 482
CR F +V L C H LC +C + CP C+ I +L
Sbjct: 419 CRVCFEREISVVLLPCRHRVLCRNCSDKC---KKCPFCRITIEERL 461
>At1g18470.1 68414.m02304 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 467
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 345 CRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKL 482
CR F ++ L C H LC C + TCP C+ I +L
Sbjct: 420 CRVCFEKDISLVLLPCRHRVLCRTCADKC---TTCPICRIDIEKRL 462
>At1g78420.1 68414.m09138 expressed protein
Length = 401
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +3
Query: 345 CRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNT-----CPKCKSGIRYKLKYK 491
C F YP++ C +CT+C + N+ CP CK+ Y ++Y+
Sbjct: 59 CPICFLYYPSLNRSRCCMKSICTECFLQMKNPNSARPTQCPFCKTP-NYAVEYR 111
>At1g53310.1 68414.m06042 phosphoenolpyruvate carboxylase, putative
/ PEP carboxylase, putative (PPC1) strong similarity to
SP|P29196 Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
(PEPCASE) {Solanum tuberosum}; contains Pfam profile
PF00311: phosphoenolpyruvate carboxylase
Length = 967
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 164 AVRLDRRSARLQGVHGAALQQTCN*LCGHSQQNAGNH 274
A+ LDR LQ +HG L++T L HS + G H
Sbjct: 35 ALLLDRFLDILQDLHGEDLRETVQELYEHSAEYEGKH 71
>At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 645
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = +3
Query: 336 CMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
C C+ + + L CGH E + N CP CK+
Sbjct: 592 CCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKNLCPICKT 634
>At5g24870.2 68418.m02943 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 520
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = +3
Query: 309 CNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
C K D C C+ + V L C H + + + + N CP CK+
Sbjct: 459 CLNKDDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKT 510
>At5g24870.1 68418.m02942 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 520
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = +3
Query: 309 CNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKS 464
C K D C C+ + V L C H + + + + N CP CK+
Sbjct: 459 CLNKDDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKT 510
>At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 336 CMRCRRSFAVYPAVTYLHCGHSCLCTDC-DETVNVDNTCPKCKS 464
C C+ + + L CGH DC + V + N CP CK+
Sbjct: 656 CCICQEEYVEGDNLGTLKCGHE-FHKDCIKQWVMIKNLCPICKT 698
>At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 336 CMRCRRSFAVYPAVTYLHCGHSCLCTDC-DETVNVDNTCPKCKS 464
C C+ + + L CGH DC + V + N CP CK+
Sbjct: 656 CCICQEEYVEGDNLGTLKCGHE-FHKDCIKQWVMIKNLCPICKT 698
>At1g68070.1 68414.m07776 zinc finger (C3HC4-type RING finger)
family protein very low similarity to RING-H2 finger
protein RHG1a [Arabidopsis thaliana] GI:3822225;
contains Pfam profile: PF00097 zinc finger, C3HC4 type
(RING finger)
Length = 343
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +3
Query: 327 DSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 470
D+ C C S+ + L C H T + + ++ TCP CK I
Sbjct: 289 DADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNI 336
>At1g49200.1 68414.m05516 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 226
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = +3
Query: 246 GIRNKTLEIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYL-HCGHSCLCTDCD 422
GI K L + P E N+ + C+ C F + L C H D
Sbjct: 109 GINKKALRMFPVVSYSP---EMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCID 165
Query: 423 ETVNVDNTCPKCK 461
+ + TCPKC+
Sbjct: 166 KWLQQHLTCPKCR 178
>At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 634
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +3
Query: 288 NLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDC-DETVNVDNTCPKCKS 464
NLP +T C+ C + + + +L C H DC D + +CP CKS
Sbjct: 574 NLPEST-VQTDNFQETCVICLETPKIGDTIRHLPCLHK-FHKDCIDPWLGRSKSCPVCKS 631
Query: 465 GI 470
+
Sbjct: 632 SV 633
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,112,296
Number of Sequences: 28952
Number of extensions: 284676
Number of successful extensions: 1073
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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