Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19a21
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.7  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.3  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   5.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.2  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 14/59 (23%), Positives = 27/59 (45%)
 Frame = -3

Query: 291 HSFGFKNLSSVDISLQTLHSYKTELSTNKFITLTVLLIVSSFSINNRQFDINSFTYICI 115
           H   F  +    ++++   S K  + +   +   +L  V+ F I++   DINS  Y C+
Sbjct: 331 HRVVFTAMGLYVLNMEHFFSVKCSIQSESLLN-DILFPVAGF-ISDFDCDINSIQYFCL 387


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 20  NVIVFYPYLKQLRDALKLIKNSFACCFKNINSMQMYVNEL 139
           N ++F    K L   L ++KN  + CF N+  +    N+L
Sbjct: 262 NSVLFQNVYKPLPIVLSIVKNCLSYCF-NLYHLASKSNQL 300


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 20  NVIVFYPYLKQLRDALKLIKNSFACCFKNINSMQMYVNEL 139
           N ++F    K L   L ++KN  + CF N+  +    N+L
Sbjct: 262 NSVLFQNVYKPLPIVLSIVKNCLSYCF-NLYHLASKSNQL 300


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 264 SVDISLQTLHSYKTELSTNKFITLTVL 184
           S++I L   ++ K +L+TN+   LTVL
Sbjct: 139 SINIILSDPNTNKLKLNTNESYELTVL 165


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 239 NVCKEISTDERFLKPKECCE 298
           N C E + DE   +P  CC+
Sbjct: 87  NECPEPTCDEPVHRPGRCCK 106


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 388 LFIRCPARWTLCVRGGRFPHGNAARV 311
           LFI  P RW L      F  G+ A V
Sbjct: 693 LFINVPPRWILEPTDKAFAQGSDAAV 718


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 409 HSFCVACLFIRCPARWTL 356
           HSF  + LF +  +RW L
Sbjct: 101 HSFMTSVLFSQVASRWPL 118


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 268 KIFKAKRMLRIRYMQRVLRYHVENGHHARKVSSVQ 372
           K FK ++   IR   +   + V+N + + K SS+Q
Sbjct: 234 KRFKDEKKELIRQTHKSPSHSVDNSNSSEKKSSIQ 268


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 657  WLYKLENVXRRAAHQMFQL 601
            W YK++ V R+   Q +QL
Sbjct: 1249 WKYKVKCVGRKQLAQKYQL 1267


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 219 LSTNKFITLTVLLIVSSFSINNRQFDINS 133
           ++  KFI  T LL+    +I    FDIN+
Sbjct: 5   INHKKFINTTKLLLWCDQTIGLITFDINT 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,942
Number of Sequences: 336
Number of extensions: 3663
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)