Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19a21
(674 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) 36 0.023
SB_52890| Best HMM Match : PH (HMM E-Value=1e-06) 32 0.37
SB_57032| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_31309| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12) 30 1.5
SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 30 1.5
SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15) 30 2.0
SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06) 30 2.0
SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_11030| Best HMM Match : 7tm_1 (HMM E-Value=7.7e-16) 29 2.6
SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 29 3.4
SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 29 3.4
SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019) 29 3.4
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_6056| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-14) 29 4.5
SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0) 29 4.5
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 29 4.5
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 29 4.5
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 29 4.5
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_58762| Best HMM Match : VWC (HMM E-Value=2.8e-06) 28 7.9
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 28 7.9
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_12363| Best HMM Match : Lig_chan (HMM E-Value=2.5e-34) 28 7.9
>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
Length = 207
Score = 36.3 bits (80), Expect = 0.023
Identities = 26/106 (24%), Positives = 44/106 (41%)
Frame = +2
Query: 56 RDALKLIKNSFACCFKNINSMQMYVNELISNCLLFIEKLETINKTVKVMNLFVDNSVLYE 235
R ALK+ K + ++ +I + L + K ++ K + +N D
Sbjct: 14 RHALKISKKTNTKGYERKARPSQATPPIIKSKTLRVSKQSSLKKLQRALN---DE---LR 67
Query: 236 CNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 373
C+VC E+ +D R L C ++ C C M + + CP CR
Sbjct: 68 CSVCYEVFSDPRTLT---ACLHSFCKECLHKMLSKRSKYIHCPLCR 110
>SB_52890| Best HMM Match : PH (HMM E-Value=1e-06)
Length = 449
Score = 32.3 bits (70), Expect = 0.37
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Frame = +2
Query: 83 SFACCFKNINSMQMYVNELISNCLLFIEKLETINKTVKVMNLFVDNSVLYECNVCKEIST 262
S +C K +S Q ++I + + +E ++++ +K N+ + S +E +
Sbjct: 251 SLSCWEKEEDSYQAPPKDII-DIKVHMEVKDSVSPLLKQQNILILTSPTHEKEPVLSAES 309
Query: 263 DERFLKPKECCEYAICNACCVTMWKT-ATTHAK--CPACR 373
DE F+ +E + A+C+ V WK T K CP+ R
Sbjct: 310 DEEFVVWREALKQAVCD---VNAWKKGCRTEMKVECPSTR 346
>SB_57032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 236 CNVCKEISTDERFLKPKECCEYAICNACCVTMWKTA--TTHAKCPACRTSY 382
C +C E D+ ++ CC+ C+ C+ W A T A CP CR Y
Sbjct: 11 CIICCE--GDDELMELHPCCKQP-CHYICLWKWIHAHLTPRATCPHCRKGY 58
>SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 236 CNVCKEISTDERFLKPKECCEYAICNACCVTMWKTA--TTHAKCPACRTSYK 385
C +C E D+ ++ CC+ C+ C+ W A T A CP CR Y+
Sbjct: 11 CIICCE--GDDELMELLPCCKQP-CHFPCLWKWIHAHLTPRATCPHCRKGYR 59
>SB_31309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 454 LFLTSYFDLKDN-EHVPSEPMAFIRNYLNCTFDLLDDAVLMNYFNYLQSMQLKHLVGSTS 630
L T LKD HV S+ M I ++C FDL + ++++S LKH++ +
Sbjct: 351 LITTPDVTLKDGIVHVISDVM--IAPAISCPFDLAKIHGARKFADFVRSNNLKHIIAAAE 408
Query: 631 TNIFKFVKP 657
T + + P
Sbjct: 409 TGPYTLLAP 417
>SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/64 (21%), Positives = 30/64 (46%)
Frame = +2
Query: 182 NKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKC 361
N+ + + F + + C +C ++ E+ L K C+++ C+ C + + H C
Sbjct: 7 NRFTERFDFFETKNEEFHCAICLDVL--EKPLSSK--CQHSCCSDCWESAFDLGEKHPAC 62
Query: 362 PACR 373
P C+
Sbjct: 63 PICQ 66
>SB_53527| Best HMM Match : zf-C3HC4 (HMM E-Value=3.3e-12)
Length = 1290
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Frame = +2
Query: 236 CNVCKEISTDERFLKPKECCEYAICNAC-------CVTMWKTATTHAKCPACRTSYK 385
C +C+ +T +R + +E + +CN C+ W T T KC C ++K
Sbjct: 64 CRICQ--NTVQRMIGKEELIKPCLCNGTLGYAHRSCMEQWLTLTEKKKCTICEFTFK 118
>SB_39219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1951
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 44 LKQLRDALKLIKNSFACCFKNINSMQMYVNEL 139
+KQLRD L+ K S C K + S+Q +VN L
Sbjct: 821 IKQLRDELENEKTSTRDCQKKLRSLQDFVNTL 852
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 236 CNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRT 376
C VC E+ +E + P C +++C C M K CP CR+
Sbjct: 23 CPVCLEVF-EEPLVLPS--CGHSVCLQCLQNMTKRNPPSLLCPVCRS 66
>SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 230 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 373
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C+
Sbjct: 166 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGEKHPACPICQ 209
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 230 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 373
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C+
Sbjct: 74 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGEKHPACPICQ 117
>SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15)
Length = 846
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 230 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 373
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C+
Sbjct: 314 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGEKHPACPICQ 357
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 230 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 373
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C+
Sbjct: 640 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGEKHPACPICQ 683
>SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06)
Length = 418
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 230 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 373
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C+
Sbjct: 172 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGEKHPACPICQ 215
>SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 230 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 373
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C+
Sbjct: 317 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGEKHPACPICQ 360
>SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 236 CNVCKEIST-DERFLKPKECCEYAICNAC 319
C+VC++ S +ERF E CE+ +C C
Sbjct: 159 CDVCRQTSRINERFSHHCEDCEFDVCRDC 187
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 230 YECNVCKEISTDERFLKPKEC--CEYAICNACCVTM 331
+ C+ C + +P C CEY ICN C + +
Sbjct: 216 WRCDECGSVHGPSDDFRPWHCRECEYDICNQCLMRL 251
>SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 230 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 373
+ C +C ++ E+ L K C+++ C+ C + ++ H CP C+
Sbjct: 170 FHCAICLDVL--EKPLSSK--CQHSCCSDCWKSAFELGGKHPACPICQ 213
>SB_11030| Best HMM Match : 7tm_1 (HMM E-Value=7.7e-16)
Length = 304
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 7/40 (17%)
Frame = -3
Query: 411 ATHFALRAYLYDVLHAG-------HFACVVAVFHMVTQHA 313
ATHFA Y+Y +L G A +A+FH V +HA
Sbjct: 135 ATHFAHEIYIYCILAVGILLPYLLILAAYIAIFHTVRRHA 174
>SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 128 VNELISNCLLFIEKLETINKTVKVMNLFV 214
+ +++NCL FIE ETIN+ K + ++
Sbjct: 1043 IPHIVANCLQFIETYETINRARKRLQTWI 1071
>SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +2
Query: 230 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 370
+ C +C ++ K C+++ C+ C + ++ TH CP C
Sbjct: 116 FHCAICLDVLGKPLSSK----CQHSCCSDCWKSAFELGETHPACPIC 158
>SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +2
Query: 230 YECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPAC 370
+ C +C ++ K C+++ C+ C + ++ TH CP C
Sbjct: 116 FHCAICLDVLGKPLSSK----CQHSCCSDCWKSAFELGETHPACPIC 158
>SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019)
Length = 413
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +2
Query: 194 KVMNLFVDNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 373
K LF+ + C +C EI + L C + +C +C M K KCP CR
Sbjct: 10 KHFELFLQEEIC--CPICTEIFETPKCLP---VCAHNVCLSCLKKM-KIEQGFIKCPICR 63
Query: 374 TSYK 385
K
Sbjct: 64 KKTK 67
>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1022
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 236 CNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTSYK 385
C VC+E TD R + P C ++ C C + CP C+ ++
Sbjct: 405 CGVCRETYTDPR-VAP---CLHSFCKECVTKLVTERQGKFVCPDCQADFQ 450
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 236 CNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAK-CPACRTS 379
C +CKE+ T + P C++ C C+ W T + CP C+ S
Sbjct: 160 CAICKEVLT-QPIATP---CDHYFC-VLCICEWLDQTYNKSGCPVCKAS 203
>SB_6056| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-14)
Length = 270
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +2
Query: 236 CNVCKEISTDERFLKPKECCEYA-ICNACCVTMWKTATTHAKCPAC 370
C +C T E + P CC A + C+ MW C C
Sbjct: 155 CRICHGGPTTEMLIAPCRCCGSAKYVHQSCLLMWFDRKQDKTCELC 200
>SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 1127
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/59 (23%), Positives = 23/59 (38%)
Frame = +2
Query: 206 LFVDNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTSY 382
+ + + + C + T RFL K CC C+ C + + C AC + Y
Sbjct: 580 IIISTNFVCVCPLIDAQMTSRRFLNKKTCCWQ--CSRCHGNSISNSPPNGSCQACPSRY 636
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 236 CNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAK-CPACRTS 379
C +CKE+ T + P C++ C C+ W T + CP C+ S
Sbjct: 34 CAICKEVLT-QPIATP---CDHYFC-VLCICEWLDQTYNKSGCPVCKAS 77
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 236 CNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAK-CPACRTS 379
C +CKE+ T + P C++ C C+ W T + CP C+ S
Sbjct: 160 CAICKEVLT-QPIATP---CDHYFC-VLCICEWLDQTYNKSGCPVCKAS 203
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 236 CNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAK-CPACRTS 379
C +CKE+ T + P C++ C C+ W T + CP C+ S
Sbjct: 160 CAICKEVLT-QPIATP---CDHYFC-VLCICEWLDQTYNKSGCPVCKAS 203
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +2
Query: 236 CNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTS 379
C VC E + + L C + +C C M +CP CR S
Sbjct: 17 CPVCLEELKEPKCLTS---CAHNVCKPCLDRMTFNGEKEIRCPTCRRS 61
>SB_58762| Best HMM Match : VWC (HMM E-Value=2.8e-06)
Length = 218
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +2
Query: 221 SVLYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTAT----THAKCPACRTS 379
S+ Y C+ + + ++ L+PK+CC C M + +T AKC C S
Sbjct: 118 SIGYHCDALLDGACEKYVLEPKQCCPTCACVHNNTEMAEGSTWAFRKDAKCHECTCS 174
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 212 VDNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRT 376
+D ++L CN+C + E + C ++ C +C T W + CP+CR+
Sbjct: 12 IDQNLL--CNIC--VGVLENAITT--ICGHSFCESCLET-WLSRPEVQSCPSCRS 59
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 319 LRYHVENGHHARKVSSVQDIV*ISTQRKMSGGGNLLTLERDH 444
L YH+ HH+ SS+Q + ++ R+ GG L+ H
Sbjct: 277 LNYHIYTDHHSYHASSMQPALPVAQPRRDMHGGAWLSRSVRH 318
>SB_12363| Best HMM Match : Lig_chan (HMM E-Value=2.5e-34)
Length = 960
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -3
Query: 288 SFGFKNLSSVD----ISLQTLHSYKTELSTNKFITLTVLLIVSSFSINNRQFDINSFTYI 121
S G+K ++++ +SLQ S LSTNK + + I S N +++
Sbjct: 134 SLGWKKMATIFDNSVLSLQIASSIGATLSTNKLVMINSTYITQDISAGNIAEKLHTLKQD 193
Query: 120 CIEFIFLKQH 91
C F+ + +
Sbjct: 194 CSAFLIVSDN 203
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,455,761
Number of Sequences: 59808
Number of extensions: 414990
Number of successful extensions: 2048
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2047
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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