Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19a21
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    27   0.72 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.0  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   6.7  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 26.6 bits (56), Expect = 0.72
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 278 KPKECCEYAICNACCVTMWKTATTHAKCPACRTSY 382
           KP+ECC       C      T  T + C AC+  Y
Sbjct: 197 KPRECCHLFCAGGC------TGPTQSDCLACKNFY 225


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +1

Query: 325 YHVENGHHARKVSSVQDIV*ISTQRKMSGGGNLLTLERDHFKYLFLT 465
           Y  +N H+ R V+    +     +RK+    +L+ ++RD    L+LT
Sbjct: 263 YQRDNTHY-RAVAQSMSLAVFGRERKVWNSASLIDVDRDGKDELWLT 308


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 538 NSNSCE*MPSALKEHVHYLLNQNSWSKINI*NDLFPESTS 419
           N   CE   SALK+   Y L    W   N   D +PE T+
Sbjct: 436 NLRDCE---SALKQIDVYTLALVLWELANRCEDFYPEGTT 472


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,369
Number of Sequences: 2352
Number of extensions: 16088
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)