Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19a21
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49909-15|CAF31470.1| 697|Caenorhabditis elegans Hypothetical p... 33 0.14
Z49909-14|CAA90116.2| 717|Caenorhabditis elegans Hypothetical p... 33 0.14
Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical pr... 33 0.19
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 33 0.25
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 33 0.25
U46753-9|AAA85765.1| 226|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 31 0.57
U56963-1|AAB38120.1| 161|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical pr... 31 0.99
AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical... 31 0.99
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 30 1.7
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 30 1.7
U97009-2|AAC69029.3| 342|Caenorhabditis elegans Serpentine rece... 30 1.7
L23651-8|AAK84495.1| 500|Caenorhabditis elegans Hypothetical pr... 29 2.3
AC006748-2|AAF60515.2| 215|Caenorhabditis elegans Hypothetical ... 29 2.3
AF016677-5|AAB66143.1| 128|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81131-4|CAD01083.1| 415|Caenorhabditis elegans Hypothetical pr... 29 4.0
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 29 4.0
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 29 4.0
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 29 4.0
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 29 4.0
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 29 4.0
Z72505-7|CAA96614.1| 333|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z70780-16|CAA94829.1| 333|Caenorhabditis elegans Hypothetical p... 27 9.2
Z69794-1|CAA93679.2| 663|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF047655-1|AAC04402.1| 558|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z49909-15|CAF31470.1| 697|Caenorhabditis elegans Hypothetical
protein C14A4.12b protein.
Length = 697
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -3
Query: 219 LSTNKFITLTVLLIVSSFSINNRQFDINSFTYICIEFIFLKQHAKEFLI 73
LS FIT+ + L++ FSIN I SF Y+ F+ + EFL+
Sbjct: 417 LSKFNFITIAISLVLGIFSINATYLHIFSFIYLQKNGYFIDGTSAEFLV 465
>Z49909-14|CAA90116.2| 717|Caenorhabditis elegans Hypothetical
protein C14A4.12a protein.
Length = 717
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -3
Query: 219 LSTNKFITLTVLLIVSSFSINNRQFDINSFTYICIEFIFLKQHAKEFLI 73
LS FIT+ + L++ FSIN I SF Y+ F+ + EFL+
Sbjct: 437 LSKFNFITIAISLVLGIFSINATYLHIFSFIYLQKNGYFIDGTSAEFLV 485
>Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical
protein T23F6.3 protein.
Length = 291
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +2
Query: 233 ECNVCKEISTDERFLKPKEC--CEYAICNACCVTMWKTATTHAKCPACR 373
EC VC E D P+ C C I CV W ++T CP CR
Sbjct: 209 ECTVCFETPVD-----PQGCNRCMNVIGCKTCVQRWHRSSTQPSCPLCR 252
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 224 VLYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACR 373
+L C +C+E E + C + IC C +++ KCP CR
Sbjct: 2 ILPTCEICEESYRSESRIPKNLNCGHVICPVCASKLFE--NPEVKCPTCR 49
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 233 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRT 376
EC+VCK D L +CC + C C V W T + CP C+T
Sbjct: 40 ECSVCKNEIIDTTSLS--DCC-HEFCYDCIVG-WLTKGSGPFCPMCKT 83
>U46753-9|AAA85765.1| 226|Caenorhabditis elegans Hypothetical
protein C34F11.1 protein.
Length = 226
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +2
Query: 233 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTSYK 385
EC +C E D R PK C + C C V W + CP CR +K
Sbjct: 154 ECTICFEKPVDPRGC-PK-CLKVIGCKKC-VKKWFDTSASKACPLCRFEWK 201
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +2
Query: 215 DNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTS 379
D S +ECN+C + + D C + C C T + CP C+++
Sbjct: 19 DESARFECNICLDAAKD----AVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSA 69
>U56963-1|AAB38120.1| 161|Caenorhabditis elegans Hypothetical
protein T13A10.2 protein.
Length = 161
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +2
Query: 236 CNVCKEISTDERFLKPKEC-CEYAICNACCVTMWKTATTHAKCPAC 370
C VC + KPK C C + C AC + KCP C
Sbjct: 97 CAVCHDSYASRGPKKPKVCSCLHTYCGACIREISSRHNGEMKCPEC 142
>Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical
protein T24D1.3 protein.
Length = 349
Score = 30.7 bits (66), Expect = 0.99
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 233 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATTHAKCPACRTSY 382
EC +C E+ L C + C C V +W +++ CP CR +
Sbjct: 273 ECTMCFEVPVSP--LGCNNCLQIIGCEEC-VDIWYRSSSKPSCPLCRRKW 319
>AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical
protein Y53F4B.21 protein.
Length = 1099
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 451 YLFLTSYFDLKDNE-HVPSEPMAFIRNYLNCTFDLLDDAVLM 573
YLFLT+ L D + H + +AFI N NC L DA+ +
Sbjct: 96 YLFLTAEESLMDTDGHRINNLVAFIGNMYNCLLKLRSDALTL 137
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 266 ERFLKPKEC-CEYAICNACCVTMWKTATTHAKCPACRTSY 382
+R+ +PK C++ C C + T + KCP CR +
Sbjct: 48 DRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEH 87
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 266 ERFLKPKEC-CEYAICNACCVTMWKTATTHAKCPACRTSY 382
+R+ +PK C++ C C + T + KCP CR +
Sbjct: 48 DRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEH 87
>U97009-2|AAC69029.3| 342|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 33 protein.
Length = 342
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 219 LSTNKFITLTVLLIVSSFSINNRQFDINSFTYICI 115
LS N FI+L + +I FSI ++F N+ +CI
Sbjct: 118 LSLNSFISLMLSMIYRYFSIRFKRFTANTSIILCI 152
>L23651-8|AAK84495.1| 500|Caenorhabditis elegans Hypothetical
protein C29E4.10 protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 56 RDALKLIKNSFACCFKNINSMQMYVNEL-ISNCLLFIEKLETINKTVKVMNLFVDNSVLY 232
R K+ + S + C +I + + ++ + NC ++E NK V + + FVD S++
Sbjct: 388 RAVQKVTRPSISWCTSHIRTPYAVMADIEVINCRGIFVEIEFSNKKVTIFSDFVDRSIIA 447
Query: 233 ECNVCKEI 256
E +++
Sbjct: 448 EFKARRKV 455
>AC006748-2|AAF60515.2| 215|Caenorhabditis elegans Hypothetical
protein Y39A3B.3 protein.
Length = 215
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 388 STQRK-MSGGGNLLTLERDHFKYLFLTSY 471
ST+RK + GGN + D+FKYL ++Y
Sbjct: 110 STERKSLKNGGNTTVILYDNFKYLIFSNY 138
>AF016677-5|AAB66143.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1240.6 protein.
Length = 128
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +2
Query: 227 LYECNVCKE--ISTDERFLKPKECCEYAICNACCVTMWKTATTHAK-CP 364
L+EC VC E DE + C ++IC +C + K CP
Sbjct: 3 LFECKVCNENYSDVDESHVPRVLTCGHSICQSCAAKQMSNSLILCKTCP 51
>Z81131-4|CAD01083.1| 415|Caenorhabditis elegans Hypothetical
protein T24D1.5 protein.
Length = 415
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +2
Query: 233 ECNVCKEISTDERFLKPKEC--CEYAICNACCVTMWKTATTHAKCPACR 373
+C +C E+ ++P+ C C+ I + C+ W CP CR
Sbjct: 346 DCTMCFEVP-----IEPQGCNRCQQIIGCSACIVHWHHHALSPSCPLCR 389
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 152 LLFIEKLETINKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTM 331
L+ + + + + T + L+ + +E +CK +E+ +K E C + +C A C+
Sbjct: 361 LMDVPQADRVQVTSEQYELYCEMGTTFE--LCKICDDNEKNIKI-EPCGHLLC-AKCLAN 416
Query: 332 WKTATTHAK-CPACRTSYK 385
W+ + CP CR K
Sbjct: 417 WQDSDGGGNTCPFCRYEIK 435
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +2
Query: 233 ECNVCKEISTDERFLKPKECCEYAICNACCVTMWKTATT-HAKCPACRTSYK 385
+C VC + + L C + C C + + H +CP CR K
Sbjct: 21 QCQVCYQPFNETTKLARSLHCGHTFCTECIRNVQNYGNSPHLECPTCRAETK 72
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 152 LLFIEKLETINKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTM 331
L+ + + + + T + L+ + +E +CK +E+ +K E C + +C A C+
Sbjct: 361 LMDVPQADRVQVTSEQYELYCEMGTTFE--LCKICDDNEKNIKI-EPCGHLLC-AKCLAN 416
Query: 332 WKTATTHAK-CPACRTSYK 385
W+ + CP CR K
Sbjct: 417 WQDSDGGGNTCPFCRYEIK 435
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 152 LLFIEKLETINKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTM 331
L+ + + + + T + L+ + +E +CK +E+ +K E C + +C A C+
Sbjct: 344 LMDVPQADRVQVTSEQYELYCEMGTTFE--LCKICDDNEKNIKI-EPCGHLLC-AKCLAN 399
Query: 332 WKTATTHAK-CPACRTSYK 385
W+ + CP CR K
Sbjct: 400 WQDSDGGGNTCPFCRYEIK 418
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 152 LLFIEKLETINKTVKVMNLFVDNSVLYECNVCKEISTDERFLKPKECCEYAICNACCVTM 331
L+ + + + + T + L+ + +E +CK +E+ +K E C + +C A C+
Sbjct: 344 LMDVPQADRVQVTSEQYELYCEMGTTFE--LCKICDDNEKNIKI-EPCGHLLC-AKCLAN 399
Query: 332 WKTATTHAK-CPACRTSYK 385
W+ + CP CR K
Sbjct: 400 WQDSDGGGNTCPFCRYEIK 418
>Z72505-7|CAA96614.1| 333|Caenorhabditis elegans Hypothetical
protein C50C10.1 protein.
Length = 333
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -3
Query: 279 FKNLSSVDISLQTLHSYKTELSTNKFITLTVLLIVSSFSINNRQFDINSFTYICIEFIFL 100
FK L IS + LH KT+L + K +T T++LI+ + +N F +IFL
Sbjct: 226 FKLLQKRKISSE-LHR-KTDLKSEKVLTATMILILLPVVVPATLSFVNLFAPSAYPYIFL 283
Query: 99 KQ 94
+
Sbjct: 284 SR 285
>Z70780-16|CAA94829.1| 333|Caenorhabditis elegans Hypothetical
protein C50C10.1 protein.
Length = 333
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -3
Query: 279 FKNLSSVDISLQTLHSYKTELSTNKFITLTVLLIVSSFSINNRQFDINSFTYICIEFIFL 100
FK L IS + LH KT+L + K +T T++LI+ + +N F +IFL
Sbjct: 226 FKLLQKRKISSE-LHR-KTDLKSEKVLTATMILILLPVVVPATLSFVNLFAPSAYPYIFL 283
Query: 99 KQ 94
+
Sbjct: 284 SR 285
>Z69794-1|CAA93679.2| 663|Caenorhabditis elegans Hypothetical
protein R03G8.1 protein.
Length = 663
Score = 27.5 bits (58), Expect = 9.2
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Frame = -3
Query: 453 IFKMISFQSQQVAAATHFALRAYLYDVLH---AGHFACVVAVFHMVTQHALHIAYSQHSF 283
I K+++ S+++ THF RA + D+L A F+ + + + H+ +Q F
Sbjct: 455 ILKILNMNSEKLQ--THFDTRATILDILKFQPAEKFSAITPLQIPGEKGQSHLR-NQPPF 511
Query: 282 GFKNLSSVDISLQ--TLHSYKTELSTNKFITLTVLLIVSSFSINNRQFDINSFTYICIEF 109
+N ++ I + KT + N I++ + V+ N+ IN+FT CI
Sbjct: 512 N-RNCQTMPIPFEYCICQFNKTSVPINSTISMEIGEKVAENV--NKLLQINNFTSECISM 568
Query: 108 IFLKQHAKEFLISFN 64
+F E L+ +N
Sbjct: 569 VF---ERTESLLQYN 580
>AF047655-1|AAC04402.1| 558|Caenorhabditis elegans Hypothetical
protein C17B7.8 protein.
Length = 558
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 161 IEKLETINKTVKVMNLFVDNSVLYECNVCKEI-STDERF 274
+EKLE IN T K F + CN+ + + ST ++F
Sbjct: 116 VEKLENINLTNKFKKFFEKRFSKFNCNLAQNLYSTFKKF 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,514,495
Number of Sequences: 27780
Number of extensions: 334035
Number of successful extensions: 1095
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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