Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19a20
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4A72 Cluster: PREDICTED: similar to conserved ...   169   5e-41
UniRef50_Q9V3W2 Cluster: CG13240-PA, isoform A; n=7; Endopterygo...   159   7e-38
UniRef50_UPI00005177E1 Cluster: PREDICTED: similar to lethal (2)...   118   2e-25
UniRef50_Q23597 Cluster: Putative uncharacterized protein; n=2; ...    81   2e-14
UniRef50_Q5DH98 Cluster: SJCHGC05498 protein; n=1; Schistosoma j...    78   2e-13
UniRef50_Q4WB54 Cluster: Melibiase subfamily, putative; n=6; Tri...    36   0.84 
UniRef50_A4C379 Cluster: Non-ribosomal peptide synthetase, termi...    33   4.5  
UniRef50_Q8YR28 Cluster: All3626 protein; n=1; Nostoc sp. PCC 71...    33   5.9  
UniRef50_Q3JA57 Cluster: PepSY-associated TM helix precursor; n=...    33   5.9  
UniRef50_Q96RS0 Cluster: Trimethylguanosine synthase homolog; n=...    33   5.9  
UniRef50_UPI0001555481 Cluster: PREDICTED: similar to structural...    33   7.8  
UniRef50_A4CKB7 Cluster: 2-deoxy-D-gluconate 3-dehydrogenase; n=...    33   7.8  
UniRef50_A0YEI2 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_UPI00015B4A72 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 170

 Score =  169 bits (411), Expect = 5e-41
 Identities = 76/159 (47%), Positives = 106/159 (66%)
 Frame = +3

Query: 48  AQTAGVKPMTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNP 227
           + ++GVK M I GR+AS+RER +GMTDAERAWR +W+KDQ L   EP+  ++Y++ER NP
Sbjct: 13  SNSSGVKVMGIQGRMASQRERMIGMTDAERAWRAKWIKDQELHG-EPIIPKDYYKERFNP 71

Query: 228 IRRFYRKPLDVLFAKLTPMLGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKG 407
           IRRFYR P+D   A L P++G  +A   R+   KL  + +     HYY KY  +DWT+KG
Sbjct: 72  IRRFYRYPMDKFEAALAPVIGANKALITRHFIAKLSFLIMTCYGAHYYQKYNRSDWTRKG 131

Query: 408 GWKVLKTKPMVLPGQPGFPFKSEKTDSDYAERKFKSSVI 524
           GWK++K +P   PG PGFP+  +    +YA   F++S I
Sbjct: 132 GWKIVKNRPASYPGDPGFPYIKDTKPHEYASFGFENSPI 170


>UniRef50_Q9V3W2 Cluster: CG13240-PA, isoform A; n=7;
           Endopterygota|Rep: CG13240-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 167

 Score =  159 bits (385), Expect = 7e-38
 Identities = 79/158 (50%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
 Frame = +3

Query: 48  AQTAGVKPMTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNP 227
           ++T GVKPM I GR+  ERER +GM+  ERAWRKQWLKDQ L  H P  V     E  NP
Sbjct: 7   SETGGVKPMVIAGRMVRERERLIGMSPEERAWRKQWLKDQELH-HGPRKVPALELELNNP 65

Query: 228 IRRFYRKPLDVLFAKLTPMLGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKG 407
           I+RFYR PLD +   L P+LG QRA   R+ +GK  L    + +  YYFKY  NDWT+KG
Sbjct: 66  IKRFYRAPLDKVCNVLEPVLGFQRAYTVRFWTGKALLALTGIYAGAYYFKYNQNDWTRKG 125

Query: 408 GWKVLKTKPMVLPGQPGFPFKSEKT-DSDYAERKFKSS 518
           GW+V+ ++   +PG  G+P  S+++  SDYA R F  S
Sbjct: 126 GWRVIHSRKQCVPGDEGYPKVSDRSAPSDYAARGFNES 163


>UniRef50_UPI00005177E1 Cluster: PREDICTED: similar to lethal (2)
           35Di CG13240-PA, isoform A; n=1; Apis mellifera|Rep:
           PREDICTED: similar to lethal (2) 35Di CG13240-PA,
           isoform A - Apis mellifera
          Length = 161

 Score =  118 bits (283), Expect = 2e-25
 Identities = 59/154 (38%), Positives = 89/154 (57%)
 Frame = +3

Query: 63  VKPMTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFY 242
           VK M+I GRV +ERER +GM + ER WR ++LK Q LA  EP+  +EY+++  NP RRFY
Sbjct: 10  VKVMSIGGRVTNERERLIGMLEEERQWRARFLKSQNLAPDEPLMTKEYYKQLYNPFRRFY 69

Query: 243 RKPLDVLFAKLTPMLGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKVL 422
           + P +   A L+P++G+  A   R  + KL +  V +    YYFKY    W K+ GW+ +
Sbjct: 70  KLPFNKFEALLSPLIGKTPAVVIRNTTSKLIMTIVGIYCGWYYFKYNTYTWMKQSGWRQI 129

Query: 423 KTKPMVLPGQPGFPFKSEKTDSDYAERKFKSSVI 524
            T+   +PG     +K  +    +A   F++S I
Sbjct: 130 NTRDAAIPGIKN--YKGLEKPKAFATNNFENSPI 161


>UniRef50_Q23597 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 210

 Score = 81.4 bits (192), Expect = 2e-14
 Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
 Frame = +3

Query: 72  MTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKP 251
           M++   +A ER R  G++ AER WRK+W+ DQ L A EPV V+   R+  NPIR  YR P
Sbjct: 41  MSLELHMADERVRAAGLSPAEREWRKKWVHDQHLHADEPVVVDAVHRQ-LNPIRTAYRLP 99

Query: 252 LDVLFAK-LTPMLGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKVLKT 428
            D  +   L P  G       R  + KL +  V + + +YY+KY   DWT   G + +  
Sbjct: 100 WDKFYLHYLKPTFGVYYGTAIRVTAPKLLMAFVVVQTAYYYWKYEVKDWTHLRGLESMPQ 159

Query: 429 KPMV 440
           K ++
Sbjct: 160 KEVI 163


>UniRef50_Q5DH98 Cluster: SJCHGC05498 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC05498 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 201

 Score = 78.2 bits (184), Expect = 2e-13
 Identities = 43/124 (34%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
 Frame = +3

Query: 123 TDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLFAKLTPMLGEQRA 302
           T+ +RA R+Q+L+DQ+L+  EPV++ E+   R N  RR YRKP D +   + P++G+Q +
Sbjct: 60  TNKDRAARRQYLEDQLLSDREPVNIPEW--NRVNIFRRMYRKPFDAMTNLIRPLVGDQYS 117

Query: 303 AHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKVLKT---KPMVLPGQPGFPFKS 473
            ++RY   K+  + +      Y+ KY  N W K    K LK+   +  + PG+PG+P + 
Sbjct: 118 RYFRYTMPKITGMLLFSWFLWYHIKYHDN-WEKHA--KSLKSGAYRGSIWPGEPGYPDRW 174

Query: 474 EKTD 485
           ++ D
Sbjct: 175 KEVD 178


>UniRef50_Q4WB54 Cluster: Melibiase subfamily, putative; n=6;
           Trichocomaceae|Rep: Melibiase subfamily, putative -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 783

 Score = 35.9 bits (79), Expect = 0.84
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +3

Query: 54  TAGVKPMTIVGRVASERERCLGMTDAERAWRKQ---WLKDQVLAAHEPVHVEEYWRERTN 224
           T G  PM ++  V S ++  L   +   +WR +   W     LAA  PV  E  WRER +
Sbjct: 281 TEGHLPMGLLKHV-SGKDTWLWQVENNGSWRWEIGDWKDSIYLAAGGPVETEHDWRERLS 339

Query: 225 PIRRFYRKPL 254
           P ++F   P+
Sbjct: 340 PGQKFTTVPV 349


>UniRef50_A4C379 Cluster: Non-ribosomal peptide synthetase, terminal
            component; n=1; Pseudoalteromonas tunicata D2|Rep:
            Non-ribosomal peptide synthetase, terminal component -
            Pseudoalteromonas tunicata D2
          Length = 3345

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +3

Query: 138  AWRKQWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLFAKLTPMLGEQRAAHYR 314
            AW+++WL D++L A       +YWRE+   +   +   LD    KL P   +  AA YR
Sbjct: 2435 AWQREWLSDELLTAQ-----LDYWREQLADVPPVHSLRLD----KLRPEEKQYNAASYR 2484


>UniRef50_Q8YR28 Cluster: All3626 protein; n=1; Nostoc sp. PCC
           7120|Rep: All3626 protein - Anabaena sp. (strain PCC
           7120)
          Length = 123

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -1

Query: 317 ISIMCSTLFSQHWGKFRKEYVQGFPV-KTTNRISTLSPIFFHVNWL 183
           IS++CS L+     K +KE V    + +T N+I T+ PI   V W+
Sbjct: 58  ISLVCSLLYLLFSSKMKKEKVMPMLITETINQIKTIVPIVTFVGWV 103


>UniRef50_Q3JA57 Cluster: PepSY-associated TM helix precursor; n=1;
           Nitrosococcus oceani ATCC 19707|Rep: PepSY-associated TM
           helix precursor - Nitrosococcus oceani (strain ATCC
           19707 / NCIMB 11848)
          Length = 370

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
 Frame = +3

Query: 183 EPVHVEEYWRERTNPIRRFYRKP--LDVLFAK--LTPMLGEQRAAHYRYISGKLGLIAVA 350
           EP H  EYW  +   ++R Y  P  LD+L  +     +LG     H   ++G  GL+A  
Sbjct: 80  EPNHSIEYW-VKDEALQRVYIDPWRLDILGVRGEHAGLLGFLHDLHVHLLAGAQGLLANG 138

Query: 351 MLSTHYYFKYLGNDWTKKGGW-KVLKT 428
           +L        +   W    GW ++LKT
Sbjct: 139 ILGLILLLMVVTGLWLAWPGWRRLLKT 165


>UniRef50_Q96RS0 Cluster: Trimethylguanosine synthase homolog; n=25;
           Euteleostomi|Rep: Trimethylguanosine synthase homolog -
           Homo sapiens (Human)
          Length = 853

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +3

Query: 132 ERAWRKQWLKDQVLAAHEPVHVEEYWRERT 221
           + +WRK++ +D +LA+ +P  +E+Y   RT
Sbjct: 139 QESWRKEYEEDDILASDDPSSIEQYENTRT 168


>UniRef50_UPI0001555481 Cluster: PREDICTED: similar to structural
           maintenance of chromosomes 1B; n=3; Mammalia|Rep:
           PREDICTED: similar to structural maintenance of
           chromosomes 1B - Ornithorhynchus anatinus
          Length = 1329

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
 Frame = +3

Query: 93  ASERERCLGMTDAERAWRK--QWLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLF 266
           A ER   + + D ERAWR+  + +++++L+    V +E    E+   ++   RK + ++ 
Sbjct: 302 AEERALKMELDDLERAWRRFERQIEEELLSRGRDVELESNQLEQYKELKERVRKKVALVA 361

Query: 267 AKLTPMLGEQRA 302
            +L  +  EQ+A
Sbjct: 362 QQLEKLEWEQKA 373


>UniRef50_A4CKB7 Cluster: 2-deoxy-D-gluconate 3-dehydrogenase; n=2;
           Flavobacteriales|Rep: 2-deoxy-D-gluconate
           3-dehydrogenase - Robiginitalea biformata HTCC2501
          Length = 257

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 336 LIAVAMLSTHYYFKYLGNDWTKKGGWKVL 422
           +IA+ + +T YY KY  ND  K GG K++
Sbjct: 117 VIAINLDATFYYCKYAANDMIKNGGGKII 145


>UniRef50_A0YEI2 Cluster: Putative uncharacterized protein; n=1;
           marine gamma proteobacterium HTCC2143|Rep: Putative
           uncharacterized protein - marine gamma proteobacterium
           HTCC2143
          Length = 273

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +3

Query: 291 EQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKGGWKVLKTKPMVLPGQPGFPFK 470
           ++ A  Y +  G +  + V+    H   +  G DW K G  KV+  KP+      G+ F 
Sbjct: 26  DEMAKTYGFKGGLVPGVTVSAYLIHPAIEAWGTDWLKHGAAKVVVEKPL----YDGYDFT 81

Query: 471 SEKTDSD 491
            + TD+D
Sbjct: 82  VDVTDAD 88


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,323,702
Number of Sequences: 1657284
Number of extensions: 13903112
Number of successful extensions: 35021
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 33946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35012
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)