Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19a20
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001463-1|AAN71218.1|  167|Drosophila melanogaster GM23292p pro...   159   4e-39
AE014134-2629|AAF53480.1|  167|Drosophila melanogaster CG13240-P...   159   4e-39
BT023709-1|AAY85109.1|  138|Drosophila melanogaster HL02152p pro...   113   1e-25
AE014134-2630|AAN10909.1|  138|Drosophila melanogaster CG13240-P...   113   1e-25

>BT001463-1|AAN71218.1|  167|Drosophila melanogaster GM23292p
           protein.
          Length = 167

 Score =  159 bits (385), Expect = 4e-39
 Identities = 79/158 (50%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
 Frame = +3

Query: 48  AQTAGVKPMTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNP 227
           ++T GVKPM I GR+  ERER +GM+  ERAWRKQWLKDQ L  H P  V     E  NP
Sbjct: 7   SETGGVKPMVIAGRMVRERERLIGMSPEERAWRKQWLKDQELH-HGPRKVPALELELNNP 65

Query: 228 IRRFYRKPLDVLFAKLTPMLGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKG 407
           I+RFYR PLD +   L P+LG QRA   R+ +GK  L    + +  YYFKY  NDWT+KG
Sbjct: 66  IKRFYRAPLDKVCNVLEPVLGFQRAYTVRFWTGKALLALTGIYAGAYYFKYNQNDWTRKG 125

Query: 408 GWKVLKTKPMVLPGQPGFPFKSEKT-DSDYAERKFKSS 518
           GW+V+ ++   +PG  G+P  S+++  SDYA R F  S
Sbjct: 126 GWRVIHSRKQCVPGDEGYPKVSDRSAPSDYAARGFNES 163


>AE014134-2629|AAF53480.1|  167|Drosophila melanogaster CG13240-PA,
           isoform A protein.
          Length = 167

 Score =  159 bits (385), Expect = 4e-39
 Identities = 79/158 (50%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
 Frame = +3

Query: 48  AQTAGVKPMTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNP 227
           ++T GVKPM I GR+  ERER +GM+  ERAWRKQWLKDQ L  H P  V     E  NP
Sbjct: 7   SETGGVKPMVIAGRMVRERERLIGMSPEERAWRKQWLKDQELH-HGPRKVPALELELNNP 65

Query: 228 IRRFYRKPLDVLFAKLTPMLGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGNDWTKKG 407
           I+RFYR PLD +   L P+LG QRA   R+ +GK  L    + +  YYFKY  NDWT+KG
Sbjct: 66  IKRFYRAPLDKVCNVLEPVLGFQRAYTVRFWTGKALLALTGIYAGAYYFKYNQNDWTRKG 125

Query: 408 GWKVLKTKPMVLPGQPGFPFKSEKT-DSDYAERKFKSS 518
           GW+V+ ++   +PG  G+P  S+++  SDYA R F  S
Sbjct: 126 GWRVIHSRKQCVPGDEGYPKVSDRSAPSDYAARGFNES 163


>BT023709-1|AAY85109.1|  138|Drosophila melanogaster HL02152p
           protein.
          Length = 138

 Score =  113 bits (273), Expect = 1e-25
 Identities = 60/120 (50%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
 Frame = +3

Query: 48  AQTAGVKPMTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNP 227
           ++T GVKPM I GR+  ERER +GM+  ERAWRKQWLKDQ L  H P  V     E  NP
Sbjct: 7   SETGGVKPMVIAGRMVRERERLIGMSPEERAWRKQWLKDQEL-HHGPRKVPALELELNNP 65

Query: 228 IRRFYRKPLDVLFAKLTPMLGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGN--DWTK 401
           I+RFYR PLD +   L P+LG QRA   R+ +GK  L    + +  YYFKY  N  +W++
Sbjct: 66  IKRFYRAPLDKVCNVLEPVLGFQRAYTVRFWTGKALLALTGIYAGAYYFKYNQNVSNWSR 125


>AE014134-2630|AAN10909.1|  138|Drosophila melanogaster CG13240-PB,
           isoform B protein.
          Length = 138

 Score =  113 bits (273), Expect = 1e-25
 Identities = 60/120 (50%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
 Frame = +3

Query: 48  AQTAGVKPMTIVGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEEYWRERTNP 227
           ++T GVKPM I GR+  ERER +GM+  ERAWRKQWLKDQ L  H P  V     E  NP
Sbjct: 7   SETGGVKPMVIAGRMVRERERLIGMSPEERAWRKQWLKDQEL-HHGPRKVPALELELNNP 65

Query: 228 IRRFYRKPLDVLFAKLTPMLGEQRAAHYRYISGKLGLIAVAMLSTHYYFKYLGN--DWTK 401
           I+RFYR PLD +   L P+LG QRA   R+ +GK  L    + +  YYFKY  N  +W++
Sbjct: 66  IKRFYRAPLDKVCNVLEPVLGFQRAYTVRFWTGKALLALTGIYAGAYYFKYNQNVSNWSR 125


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,493,025
Number of Sequences: 53049
Number of extensions: 611491
Number of successful extensions: 1418
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)