Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19a18
         (636 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   302   3e-82
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   302   3e-82
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   302   3e-82
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   302   3e-82
BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   259   3e-69
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   259   3e-69
AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p pro...    38   0.015
AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA...    38   0.015
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    31   1.7  
AY058244-1|AAL13473.1|  796|Drosophila melanogaster GH01087p pro...    28   9.2  
AE014297-1919|AAF55113.1|  796|Drosophila melanogaster CG7262-PA...    28   9.2  

>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  302 bits (741), Expect = 3e-82
 Identities = 146/190 (76%), Positives = 167/190 (87%)
 Frame = +1

Query: 28  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 207
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 208 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 387
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 388 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGRE 567
           VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 568 VTFEFPEPYL 597
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  302 bits (741), Expect = 3e-82
 Identities = 146/190 (76%), Positives = 167/190 (87%)
 Frame = +1

Query: 28  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 207
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 208 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 387
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 388 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGRE 567
           VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 568 VTFEFPEPYL 597
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  302 bits (741), Expect = 3e-82
 Identities = 146/190 (76%), Positives = 167/190 (87%)
 Frame = +1

Query: 28  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 207
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 208 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 387
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 388 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGRE 567
           VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 568 VTFEFPEPYL 597
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  302 bits (741), Expect = 3e-82
 Identities = 146/190 (76%), Positives = 167/190 (87%)
 Frame = +1

Query: 28  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 207
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 208 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 387
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 388 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGRE 567
           VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 568 VTFEFPEPYL 597
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  259 bits (634), Expect = 3e-69
 Identities = 126/166 (75%), Positives = 145/166 (87%)
 Frame = +1

Query: 28  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 207
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 208 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 387
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 388 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 525
           VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  259 bits (634), Expect = 3e-69
 Identities = 126/166 (75%), Positives = 145/166 (87%)
 Frame = +1

Query: 28  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 207
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 208 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 387
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 388 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 525
           VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p protein.
          Length = 1394

 Score = 37.5 bits (83), Expect = 0.015
 Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
 Frame = +1

Query: 58   AEADSFETSISQALVELETNSDLKAQLR-ELYITKAKEIELHNKKSIIIYVPMP----KL 222
            A A + E+S+++ ++EL  NS L +QL  E    K  E++    +++    P P    + 
Sbjct: 1115 ATASAAESSVTERVLEL-ANSLLDSQLSVEQATLKPMELKTTRCRALSKTAPFPVSCDEA 1173

Query: 223  KAFQKIQIR-----LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 387
             AF+ +Q        V     +    HV   GDR+    P     +         R++ +
Sbjct: 1174 GAFRPLQCNGRSCWCVDAAGNQLQSTHVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRN 1233

Query: 388  VYDAI---LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVD 528
             YD I   L+ L+    +   R++   DGS +++  L    +  +   ++
Sbjct: 1234 AYDTIRRELQQLLGGESVENLRVQENFDGSAIVRFELHNEAKVDLAFAIE 1283


>AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA
            protein.
          Length = 1511

 Score = 37.5 bits (83), Expect = 0.015
 Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
 Frame = +1

Query: 58   AEADSFETSISQALVELETNSDLKAQLR-ELYITKAKEIELHNKKSIIIYVPMP----KL 222
            A A + E+S+++ ++EL  NS L +QL  E    K  E++    +++    P P    + 
Sbjct: 1232 ATASAAESSVTERVLEL-ANSLLDSQLSVEQATLKPMELKTTRCRALSKTAPFPVSCDEA 1290

Query: 223  KAFQKIQIR-----LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 387
             AF+ +Q        V     +    HV   GDR+    P     +         R++ +
Sbjct: 1291 GAFRPLQCNGRSCWCVDAAGNQLQSTHVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRN 1350

Query: 388  VYDAI---LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVD 528
             YD I   L+ L+    +   R++   DGS +++  L    +  +   ++
Sbjct: 1351 AYDTIRRELQQLLGGESVENLRVQENFDGSAIVRFELHNEAKVDLAFAIE 1400


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
           protein.
          Length = 1489

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = +1

Query: 181 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 360
           NKK  ++   + KL  +++    +  + + K   KH+  V + K  PK + KT+ + K+K
Sbjct: 567 NKK--LLNSSVVKLSLYEQNPRMVPSKFQPKCEEKHMEPVAEEKPKPKSAAKTKESRKRK 624

Query: 361 RPRSRT 378
           +P ++T
Sbjct: 625 QPVAQT 630


>AY058244-1|AAL13473.1|  796|Drosophila melanogaster GH01087p
           protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +1

Query: 22  VKMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSI 195
           VK++ + ++ +G+  D F   ++      ETNS ++ QLR  Y  K +      KK++
Sbjct: 315 VKVAVEFLREAGSSHDEFAQLVADRNAG-ETNSKIENQLRLQYANKIRNSTDAYKKAV 371


>AE014297-1919|AAF55113.1|  796|Drosophila melanogaster CG7262-PA
           protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +1

Query: 22  VKMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSI 195
           VK++ + ++ +G+  D F   ++      ETNS ++ QLR  Y  K +      KK++
Sbjct: 315 VKVAVEFLREAGSSHDEFAQLVADRNAG-ETNSKIENQLRLQYANKIRNSTDAYKKAV 371


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,365,710
Number of Sequences: 53049
Number of extensions: 566554
Number of successful extensions: 1461
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)