Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19a05
         (409 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   1.9  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   1.9  
AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450 CY...    23   5.7  
Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             22   9.9  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    22   9.9  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 64  DATRLHYSNAHAKQTLATLFANRNHSSFYEY 156
           D+  + YS++   Q L+     RNH+  YEY
Sbjct: 295 DSDGIKYSDSLLGQLLSLSIMPRNHNGPYEY 325


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 289 NFCIANSDGVTIQHKMLTNVLSFLL 363
           +FCI N     I+H+ L N +  LL
Sbjct: 100 DFCIHNQKSADIKHRALHNEIKSLL 124


>AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450
           CYP4G17 protein.
          Length = 151

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 62  TTQHDYTIQTRTQNKHLQLYLP 127
           T   D  +  RTQN+H   Y+P
Sbjct: 119 TFNPDNFLPERTQNRHYYSYIP 140


>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 212 ATIKFKLFLKSNVLTNVMAY 153
           ATI+  LF K+N + N + Y
Sbjct: 104 ATIRGSLFAKANAVYNPIVY 123


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -3

Query: 359  KKLNTLVNILC*IVTPSLLAMQKL 288
            K+L + ++ L  I TP++ AMQKL
Sbjct: 1008 KELQSKLDTLEKIQTPNMKAMQKL 1031


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,488
Number of Sequences: 2352
Number of extensions: 6318
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)