Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19a04
(599 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 24 1.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 5.3
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 5.3
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 5.3
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 5.3
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 5.3
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 422 KDSLLRETTL*CGNRNHSLRN 360
K SLL+E T+ C H L+N
Sbjct: 379 KQSLLKENTVTCQEAMHMLKN 399
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -2
Query: 163 KNLYFSKPRYLRSAYSLKTRTC 98
KN F KP + ++Y+L + C
Sbjct: 1613 KNCLFRKPEHFVASYALISNQC 1634
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 389 CGNRNHSLRNEYIG 348
CGN +H N+++G
Sbjct: 1598 CGNFDHDSTNDFVG 1611
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +1
Query: 187 CNDPHLCKIIENNYNY 234
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +1
Query: 187 CNDPHLCKIIENNYNY 234
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +1
Query: 187 CNDPHLCKIIENNYNY 234
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +1
Query: 187 CNDPHLCKIIENNYNY 234
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +1
Query: 187 CNDPHLCKIIENNYNY 234
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +1
Query: 187 CNDPHLCKIIENNYNY 234
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.3
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = +1
Query: 187 CNDPHLCKIIENNYNY 234
C +P + + NNY Y
Sbjct: 76 CKEPKIISSLSNNYKY 91
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +1
Query: 115 ASTQTSNTLALKSINFFEYVIFQFCNDPHLCKIIE 219
A+ N A + + F + F+FC D KI++
Sbjct: 54 AAVNRLNIPANEILELFGRMFFEFCQDSGYDKILQ 88
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 452 NTTTCGNPHVKDSL 411
NT C NP+ +DSL
Sbjct: 106 NTKNCVNPYDRDSL 119
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 242 KYLKRPPTTCATSGTI 289
K + PP CA SG+I
Sbjct: 309 KSITEPPKNCADSGSI 324
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +1
Query: 115 ASTQTSNTLALKSINFFEYVIFQFCNDPHLCKIIE 219
A+ N A + + F + F+FC D KI++
Sbjct: 54 AAVNRLNIPANEILELFGRMFFEFCQDSGYDKILQ 88
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,133
Number of Sequences: 438
Number of extensions: 4284
Number of successful extensions: 43
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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