Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc19a02
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      26   0.25 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      26   0.25 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    25   0.58 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 597 TYEVNWKKSNINFEDRFDKYLDPNFFQHRIH 689
           T E N +KSN+N  ++  KYL  N  + + H
Sbjct: 315 TKETNLEKSNLNHNEQLRKYLCKNEDETKNH 345


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 597 TYEVNWKKSNINFEDRFDKYLDPNFFQHRIH 689
           T E N +KSN+N  ++  KYL  N  + + H
Sbjct: 207 TKETNLEKSNLNHNEQLRKYLCKNEDETKNH 237


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +1

Query: 175 VHTITDKRHMPIFRSRFALALKSLLDIIMKLYLKLY 282
           ++++ ++R+M    S   L +++LLDI   LYL  Y
Sbjct: 48  IYSVYERRYMNAHLSGIQLVVRNLLDI--SLYLNAY 81



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 223 FALALKSLLDIIMKLYLKLY 282
           FA+   S+ D   KLY KLY
Sbjct: 16  FAITPSSIYDKPTKLYQKLY 35


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 11  YVYFNSELNCCCYITACKNEIFIYIVY 91
           Y Y+   L CC +I    + +F+  +Y
Sbjct: 260 YFYYMHLLFCCAFIIFTMHLLFLLCIY 286


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 465 IDGDHFYIWTHKKFDIGYNGNR 530
           + GD FY + +  FD  Y  NR
Sbjct: 396 LTGDQFYNFLNHNFDRHYEENR 417


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 155 HYLFSIFIGMCVFIAMNYSPHYKQY 81
           H+LF I IGM + I +     Y+ +
Sbjct: 672 HFLFHIVIGMNLIIHVGTQLIYRPF 696


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +3

Query: 597 TYEVNWKKSNINFEDRFDKYLDPNFF-QH 680
           TYE+ W       E++ + Y   NF  QH
Sbjct: 288 TYEMRWYCQTATMEEKQELYEFSNFVSQH 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,700
Number of Sequences: 336
Number of extensions: 4164
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)