Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc19a02
(690 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54821| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 7e-61
SB_27836| Best HMM Match : DUF92 (HMM E-Value=2.2e-09) 30 1.5
SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45) 29 3.6
SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0) 29 3.6
SB_27553| Best HMM Match : Pyr_redox (HMM E-Value=1.1e-20) 28 6.2
SB_3810| Best HMM Match : PEPCK (HMM E-Value=0) 28 6.2
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_54821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 133 bits (322), Expect(2) = 7e-61
Identities = 61/89 (68%), Positives = 70/89 (78%)
Frame = +3
Query: 60 VKMKFLYILFIMWTIVHCDEHTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTK 239
V + L+IL + +I DEH H YKD E+VVLWMNTVGPYHNRQETY Y+SLPFC G K
Sbjct: 6 VGLSLLFILALQGSIA--DEHDHIYKDAEEVVLWMNTVGPYHNRQETYNYYSLPFCRGEK 63
Query: 240 VTIGHYHETLSEALQGVELEFSGLDITFK 326
TI HYHETL E +QGVELEFSGL+I+FK
Sbjct: 64 RTISHYHETLGENIQGVELEFSGLEISFK 92
Score = 118 bits (285), Expect(2) = 7e-61
Identities = 51/82 (62%), Positives = 67/82 (81%)
Frame = +3
Query: 444 IWGTVGEIDGDHFYIWTHKKFDIGYNGNRIVEVNLTAENKERLSPDAKIPFTYEVNWKKS 623
I G +GE G+ +YIWTHKK +IG++ +IV+VNLT+E+K +LSP+AKI FTYEV WK S
Sbjct: 94 IVGDIGET-GEEYYIWTHKKIEIGHSATQIVDVNLTSESKVKLSPNAKIVFTYEVKWKDS 152
Query: 624 NINFEDRFDKYLDPNFFQHRIH 689
+ FE R++KYLDP+FFQHRIH
Sbjct: 153 AVPFEKRYEKYLDPSFFQHRIH 174
>SB_27836| Best HMM Match : DUF92 (HMM E-Value=2.2e-09)
Length = 355
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = -2
Query: 449 PYWQIVYIHLIPIMVFDSINESFVSLIVEFDGTKLLRRHIFLKRNIKTAE 300
P W I++I L+ F SI +SF+ V++ G +++H+ + R TA+
Sbjct: 261 PQWPIIFIGLVAGF-FGSIIDSFLGATVQYSGFCSVKKHV-VNRPTATAK 308
>SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45)
Length = 1102
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 578 IRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTKDLVRI 637
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 638 YISLIRSVPTEDL 650
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 610 IRSVPTEDLVRIYISLIRSVPTKDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRI 669
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 670 YISLIRSVPTKDL 682
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 626 IRSVPTKDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTKDLVRI 685
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 686 YISLIRSVPTEDL 698
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 658 IRSVPTEDLVRIYISLIRSVPTKDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRI 717
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 718 YISLIRSVPTEDL 730
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 674 IRSVPTKDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRI 733
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 734 YISLIRSVPTKDL 746
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 690 IRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTKDLVRI 749
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 750 YISLIRSVPTEDL 762
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 722 IRSVPTEDLVRIYISLIRSVPTKDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRI 781
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 782 YISLIRSVPTEDL 794
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 738 IRSVPTKDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRI 797
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 798 YISLIRSVPTKDL 810
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 754 IRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTKDLVRI 813
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 814 YISLIRSVPTEDL 826
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -2
Query: 488 DVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRRHIFLKRN 315
D+ + I+L S P +V YI LI + + + ++SLI L+R +I L R+
Sbjct: 569 DLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRS 628
Query: 314 IKTAEL 297
+ T +L
Sbjct: 629 VPTKDL 634
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + ++SLI L+R
Sbjct: 770 IRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTKDLVRIYISLIRSVPTEDLVRI 829
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 830 YISLIRSVPTEDL 842
>SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1358
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 247 IRSVPTEDLVRIYISLIRSVPTKDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRI 306
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 307 YISLIRSVPTEDL 319
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 263 IRSVPTKDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRI 322
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 323 YISLIRSVPTKDL 335
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 279 IRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTKDLVRI 338
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 339 YISLIRSVPTEDL 351
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 311 IRSVPTEDLVRIYISLIRSVPTKDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRI 370
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 371 YISLIRSVPTEDL 383
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 327 IRSVPTKDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRI 386
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 387 YISLIRSVPTKDL 399
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + + ++SLI L+R
Sbjct: 343 IRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTKDLVRI 402
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 403 YISLIRSVPTEDL 415
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -2
Query: 509 IKFLVSPDVKMVSINLTYSAPYWQIV--YIHLIPIMVFDSINESFVSLIVEFDGTKLLRR 336
I+ + + D+ + I+L S P +V YI LI + + ++SLI L+R
Sbjct: 359 IRSVPTEDLVRIYISLIRSVPTEDLVRIYISLIRSVPTKDLVRIYISLIRSVPTEDLVRI 418
Query: 335 HIFLKRNIKTAEL 297
+I L R++ T +L
Sbjct: 419 YISLIRSVPTEDL 431
>SB_27553| Best HMM Match : Pyr_redox (HMM E-Value=1.1e-20)
Length = 1037
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +3
Query: 210 FSLPFCVGTKVTIGHYHETLSEALQGVELEFSGLDIT 320
FSLP+C GT V IG + +L A G L GLD+T
Sbjct: 763 FSLPYCPGTTVLIGASYVSLECA--GF-LAAMGLDVT 796
>SB_3810| Best HMM Match : PEPCK (HMM E-Value=0)
Length = 707
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 513 GYNGNRIVEVNLTAENKERLSPDAKIPFTYEVNWKKSN 626
GYN R +E L+ +K + P+ K+P + VNW + N
Sbjct: 662 GYNYGRYLEHWLSMADKTK-HPNYKLPDIFHVNWFRVN 698
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +3
Query: 84 LFIMWTIVHCDEHTHSYKDGEQVVLWMNTVGPYHNRQETYAYFSLPFCVGTKVTIGHYH 260
+ + TI+HC H HS + + TV Y + S F + T + H+H
Sbjct: 594 IIVSITILHCHHHRHSPSSPSPSCIAIITVIHYRHNHHPALSSSPSFTIVTIILRHHHH 652
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,513,339
Number of Sequences: 59808
Number of extensions: 463785
Number of successful extensions: 1213
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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