Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18p21
         (153 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U96074-1|AAC78728.1|  320|Homo sapiens translation initiation fa...    69   3e-12
CR457134-1|CAG33415.1|  320|Homo sapiens EIF3S4 protein.               69   3e-12
BT006889-1|AAP35535.1|  320|Homo sapiens eukaryotic translation ...    69   3e-12
BC008469-1|AAH08469.1|  320|Homo sapiens eukaryotic translation ...    69   3e-12
BC000733-1|AAH00733.1|  320|Homo sapiens eukaryotic translation ...    69   3e-12
AF094850-1|AAG15419.1|  320|Homo sapiens eukaryotic translation ...    69   3e-12
AF092453-1|AAG15396.1|  320|Homo sapiens eukaryotic translation ...    69   3e-12
AF020833-1|AAB71866.1|  320|Homo sapiens eukaryotic translation ...    69   3e-12

>U96074-1|AAC78728.1|  320|Homo sapiens translation initiation
           factor eIF3 p44 subunit protein.
          Length = 320

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = +3

Query: 6   IEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMXFITSKE 152
           IE R  SK++A+RK W KFG+S  D PGPN ATT V++DV M FITSKE
Sbjct: 87  IETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKE 135


>CR457134-1|CAG33415.1|  320|Homo sapiens EIF3S4 protein.
          Length = 320

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = +3

Query: 6   IEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMXFITSKE 152
           IE R  SK++A+RK W KFG+S  D PGPN ATT V++DV M FITSKE
Sbjct: 87  IETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKE 135


>BT006889-1|AAP35535.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 4 delta, 44kDa protein.
          Length = 320

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = +3

Query: 6   IEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMXFITSKE 152
           IE R  SK++A+RK W KFG+S  D PGPN ATT V++DV M FITSKE
Sbjct: 87  IETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKE 135


>BC008469-1|AAH08469.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 4 delta, 44kDa protein.
          Length = 320

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = +3

Query: 6   IEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMXFITSKE 152
           IE R  SK++A+RK W KFG+S  D PGPN ATT V++DV M FITSKE
Sbjct: 87  IETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKE 135


>BC000733-1|AAH00733.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 4 delta, 44kDa protein.
          Length = 320

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = +3

Query: 6   IEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMXFITSKE 152
           IE R  SK++A+RK W KFG+S  D PGPN ATT V++DV M FITSKE
Sbjct: 87  IETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKE 135


>AF094850-1|AAG15419.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3 subunit p42/p44 protein.
          Length = 320

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = +3

Query: 6   IEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMXFITSKE 152
           IE R  SK++A+RK W KFG+S  D PGPN ATT V++DV M FITSKE
Sbjct: 87  IETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKE 135


>AF092453-1|AAG15396.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3 subunit p42/p44 protein.
          Length = 320

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = +3

Query: 6   IEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMXFITSKE 152
           IE R  SK++A+RK W KFG+S  D PGPN ATT V++DV M FITSKE
Sbjct: 87  IETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKE 135


>AF020833-1|AAB71866.1|  320|Homo sapiens eukaryotic translation
           initiation factor 3 subunit protein.
          Length = 320

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = +3

Query: 6   IEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMXFITSKE 152
           IE R  SK++A+RK W KFG+S  D PGPN ATT V++DV M FITSKE
Sbjct: 87  IETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKE 135


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,316,603
Number of Sequences: 237096
Number of extensions: 253963
Number of successful extensions: 742
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 76,859,062
effective HSP length: 30
effective length of database: 69,746,182
effective search space used: 1394923640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)