Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18p21
         (153 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p pro...    73   7e-14
AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA ...    73   7e-14
AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-P...    71   3e-13
AE014296-910|AAF47948.2| 4390|Drosophila melanogaster CG17150-PA...    27   3.5  

>AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p
           protein.
          Length = 269

 Score = 72.5 bits (170), Expect = 7e-14
 Identities = 30/49 (61%), Positives = 40/49 (81%)
 Frame = +3

Query: 6   IEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMXFITSKE 152
           I K+VV K++AKR+TW+KFGDS +DKPGPN  TT V+E++ M F+ SKE
Sbjct: 56  ISKQVVPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKE 104


>AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA
           protein.
          Length = 269

 Score = 72.5 bits (170), Expect = 7e-14
 Identities = 30/49 (61%), Positives = 40/49 (81%)
 Frame = +3

Query: 6   IEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMXFITSKE 152
           I K+VV K++AKR+TW+KFGDS +DKPGPN  TT V+E++ M F+ SKE
Sbjct: 56  ISKQVVPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKE 104


>AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-PA
           protein.
          Length = 273

 Score = 70.5 bits (165), Expect = 3e-13
 Identities = 29/49 (59%), Positives = 39/49 (79%)
 Frame = +3

Query: 6   IEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMXFITSKE 152
           IEK++V K++A+R+ W KFGDS SDKPGPN  TT  +E++FM FI SK+
Sbjct: 54  IEKQIVPKAVARRRNWVKFGDSRSDKPGPNSQTTMASEEIFMQFIGSKD 102


>AE014296-910|AAF47948.2| 4390|Drosophila melanogaster CG17150-PA,
            isoform A protein.
          Length = 4390

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -3

Query: 133  CMKTSSATLVVAGLGPGLSLAESPNLLQVLRLAILFETTRFS 8
            C+  S A LVV   G G S   + NLL + + A L     FS
Sbjct: 2285 CISKSYAMLVVGPTGTGKSAIITSNLLAMPKFANLVNVINFS 2326


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,755,737
Number of Sequences: 53049
Number of extensions: 70068
Number of successful extensions: 304
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 24,988,368
effective HSP length: 31
effective length of database: 23,343,849
effective search space used: 443533131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)