Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18p14
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.5  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   7.9  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 678 SKHFAFELVFCNFLLRSFITLVKSDGGLASGKDFN 574
           S H A++      + R  +   K+D G+ SG DF+
Sbjct: 30  SPHTAWQFGVSQIVKREPMDEDKNDSGVTSGSDFH 64


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
 Frame = +2

Query: 113 NILEIVEKARDRYFNEPTQKNYEYIKKLFLRTKYMDDSIDYKDFNRRILLIVFK------ 274
           N  EIV    D  +   T K    +  L L  K  +  ID +     +   +F+      
Sbjct: 262 NFKEIVVPETDEVY---TGKRRLAMLDLLLTAKNKEGLIDDEGIREEVDTFMFEGHDTTA 318

Query: 275 FALNKSASYFPSYKEIIEVAIKRLNKINPDLKSSP 379
            AL  +      +KE+ +  ++ +N++  D+K  P
Sbjct: 319 AALGFALMVLAGHKEVQDKIVEEMNEVLGDIKKKP 353


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 238 FIIYRIVHVFCS*K*FFNVFIVFL 167
           FII+ +  +FC    FFN+ ++FL
Sbjct: 173 FIIFTMHLLFCCAFIFFNMHLLFL 196


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
 Frame = +2

Query: 113 NILEIVEKARDRYFNEPTQKNYEYIKKLFLRTKYMDDSIDYKDFNRRILLIVFK------ 274
           N  EIV    D  +   T K    +  L L  K  +  ID +     +   +F+      
Sbjct: 262 NFKEIVVPETDEVY---TGKRRLAMLDLLLTAKNKEGLIDDEGIREEVDTFMFEGHDTTA 318

Query: 275 FALNKSASYFPSYKEIIEVAIKRLNKINPDLKSSP 379
            AL  +      +KE+ +  ++ +N++  D+K  P
Sbjct: 319 AALGFALMVLAGHKEVQDKIVEEMNEVLGDIKKKP 353


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 563 KQPTLKSLPDARPPSLLTSVMNERKRKLQNTNS 661
           K+   +S  + +  SL   + N  KRK++NT++
Sbjct: 332 KRRNRESTTNTQSSSLSEFLTNTHKRKIENTST 364


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 401 CNAEALRAENSLNRG 357
           CN + L  EN +N+G
Sbjct: 66  CNIQVLDEENDINQG 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,351
Number of Sequences: 336
Number of extensions: 3538
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)