Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18p10
(708 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0255 - 14281004-14281066,14281114-14281203,14281672-142817... 36 0.042
01_04_0054 - 15456668-15459691 34 0.096
01_01_0848 + 6614403-6614768 33 0.22
09_04_0121 - 14840494-14841276 32 0.51
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093... 31 0.68
04_04_1404 + 33302080-33303341,33303435-33305307 31 1.2
03_05_1006 + 29635372-29635442,29635544-29635589,29635672-296358... 31 1.2
07_03_0550 - 19356710-19357763,19358941-19359256,19359552-19359609 30 1.6
01_06_1415 + 37171380-37171923,37172476-37172666,37173628-37173678 30 1.6
01_01_0493 + 3644587-3644917,3645150-3645233,3645584-3645798,364... 30 2.1
12_02_0230 + 15973390-15974645,16002878-16003097 29 2.7
06_01_0199 + 1538124-1538485,1538997-1539076,1539198-1539357,153... 29 2.7
09_03_0117 - 12486672-12486818,12487438-12487488,12487583-124877... 29 3.6
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 29 3.6
05_06_0026 - 25024807-25025300,25025432-25025495,25025567-250256... 29 3.6
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 29 3.6
11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780... 29 4.8
09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166 29 4.8
01_05_0287 - 20460956-20461282,20462051-20462201,20462285-204625... 29 4.8
10_08_0856 + 21099162-21099698,21100134-21101020,21101149-21101197 28 6.3
10_02_0072 - 4936950-4937363 28 6.3
05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608 28 6.3
04_04_0020 + 22182649-22182829,22183900-22183999,22184415-221844... 28 6.3
02_02_0280 - 8515894-8517309 28 6.3
12_02_1036 - 25587313-25587890,25589209-25589272,25589356-255894... 28 8.4
12_02_1031 + 25537495-25537552,25538774-25538836,25538966-255392... 28 8.4
08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767 28 8.4
06_01_0893 - 6834350-6834464,6835042-6835218,6835301-6835350,683... 28 8.4
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 28 8.4
01_01_1161 + 9244628-9245748,9247696-9247828,9248233-9248448,924... 28 8.4
>01_03_0255 -
14281004-14281066,14281114-14281203,14281672-14281737,
14281837-14281907,14282021-14282153,14282245-14283898,
14285346-14285935
Length = 888
Score = 35.5 bits (78), Expect = 0.042
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = -3
Query: 373 RAVRAVCAPEVDERAQPAAREQCAQPAAR-KQCAQPAVREQCAQPA--AREQCAQPAVRE 203
RA A E ERA ARE+ A+ AA K+ RE+ A+ A ARE+ A A RE
Sbjct: 601 RAAVQKAAAEARERAAAEARERAAKAAAEAKERVAEEARERAAKAAAEARERAATEA-RE 659
Query: 202 QCAQYARQK 176
+ A AR K
Sbjct: 660 KAAAEARAK 668
Score = 29.5 bits (63), Expect = 2.7
Identities = 26/88 (29%), Positives = 37/88 (42%)
Frame = -2
Query: 299 ASGTQAVRAASGTRAVRAASGTRAVRAASGTRAVRAVCAPEVDERAQAAAREQHVQSARL 120
A + A + RA +AA+ + R A R A A E ERA ARE+ AR
Sbjct: 609 AEARERAAAEARERAAKAAAEAKE-RVAEEARERAAKAAAEARERAATEAREKAAAEARA 667
Query: 119 CALLLEHGADSLVTSHVSDNALRTSLDK 36
A E A V + A R ++++
Sbjct: 668 KA---ERAAVDKVAAEARRRAERAAVER 692
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/85 (27%), Positives = 33/85 (38%)
Frame = -2
Query: 257 AVRAASGTRAVRAASGTRAVRAVCAPEVDERAQAAAREQHVQSARLCALLLEHGADSLVT 78
AV+ A+ RAA+ R A A E ER ARE+ ++A A
Sbjct: 603 AVQKAAAEARERAAAEARERAAKAAAEAKERVAEEARERAAKAAAEARERAATEAREKAA 662
Query: 77 SHVSDNALRTSLDKTRHARTPRTKR 3
+ A R ++DK R +R
Sbjct: 663 AEARAKAERAAVDKVAAEARRRAER 687
>01_04_0054 - 15456668-15459691
Length = 1007
Score = 34.3 bits (75), Expect = 0.096
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = -3
Query: 337 ERAQPAAREQCAQPAARKQCAQPAV---REQCAQPAAR-EQCAQPAVREQCAQYARQK*M 170
+ QP Q AQ A KQC QP + R Q AQP +Q AQP Q Q + K
Sbjct: 136 QATQPKQGAQPAQAAQPKQCTQPPLATKRNQSAQPTHNTQQSAQPKQSTQPMQATQPKHA 195
Query: 169 SARRQRHASNTCS 131
+ ++ +N S
Sbjct: 196 TEPMEKTDANRAS 208
Score = 33.1 bits (72), Expect = 0.22
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = -3
Query: 319 AREQCAQPAARKQCAQPAVREQCAQP---AAREQCAQPAVREQCAQYARQ--K*MSARRQ 155
A +Q QP Q AQ A +QC QP R Q AQP Q + +Q + M A +
Sbjct: 133 ASKQATQPKQGAQPAQAAQPKQCTQPPLATKRNQSAQPTHNTQQSAQPKQSTQPMQATQP 192
Query: 154 RHAS 143
+HA+
Sbjct: 193 KHAT 196
>01_01_0848 + 6614403-6614768
Length = 121
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -2
Query: 299 ASGTQAVRAASGTRAVRAASGTRAVRAASGTRAVRAVCAPEVDERAQAAAREQHVQ 132
A T+ AA+ RAA A+RAA+G R VDE + AA +QH++
Sbjct: 56 AGETEEAEAAARRAEARAAGAGAALRAAAGEREAHEAKVRAVDE--EIAAMDQHIR 109
>09_04_0121 - 14840494-14841276
Length = 260
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = -3
Query: 337 ERAQPAAR-EQCAQPA--ARKQCAQPAVREQCAQPAAREQCAQPAVREQCAQYARQK 176
++A+P A ++ PA A QC P +Q A AA EQC PA + A A Q+
Sbjct: 136 KKAEPVAEADRYIAPAEMAPVQCVTPTKMDQPAVAAAAEQCISPANSAEPAVAAEQR 192
>12_02_0693 -
22207582-22207620,22208421-22208597,22209258-22209347,
22210215-22210280,22210473-22210570,22210669-22210789,
22210875-22212477,22213332-22213915
Length = 925
Score = 31.5 bits (68), Expect = 0.68
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -3
Query: 346 EVDERAQPAAREQCAQPAAR-KQCAQPAVREQCAQPAAREQCAQPAVREQCAQYARQK*M 170
E ERA ARE+ + AA K+ A +E+ A A A+ A E+ Q AR++
Sbjct: 605 EARERAAVDARERAERAAAEAKERAAAEAKEKVATQARDRAAAERAAVERAQQEARRRAE 664
Query: 169 SARRQRHAS 143
A +R AS
Sbjct: 665 RAAVERAAS 673
>04_04_1404 + 33302080-33303341,33303435-33305307
Length = 1044
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -3
Query: 337 ERAQPAAREQCAQPAARKQCAQPAVR-EQCAQPAAREQCAQPAVREQCAQYARQK*MSAR 161
E P A E+ + + R++ A E+ A+ AAR + A+ A RE+ A+ A
Sbjct: 437 EAEDPTAAEERRRESDRREAADRLREAEEAAREAARIRQAEEAAREEAARAEEAAKEEAA 496
Query: 160 RQRHASNTCSLHGS 119
R R A T + S
Sbjct: 497 RARQAKATAAAGAS 510
>03_05_1006 +
29635372-29635442,29635544-29635589,29635672-29635813,
29635878-29636653,29636750-29637370
Length = 551
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 270 GCAHCLRAAGWAHCSRAAGCARSSTSGAHTARTARVPLAAR 392
GC H W H RAAG +T+G A A P +R
Sbjct: 169 GC-HVASGQAWTHSGRAAGVLYVTTAGGGAAAEAAAPAPSR 208
>07_03_0550 - 19356710-19357763,19358941-19359256,19359552-19359609
Length = 475
Score = 30.3 bits (65), Expect = 1.6
Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = -2
Query: 302 PASGTQAVRAASGTRAVRAASGTRAVRAASGTRAVRAVCAPEVDERAQAAAREQHVQSAR 123
PA+GT A RA RAVR R A A A V E A AAA + +
Sbjct: 34 PAAGTAAARAQR-ARAVRPLRAAEPARQPVSASAAAAPAAAPVAEDAAAAAVDAPAPAVD 92
Query: 122 LCALLLE-HGADSLVTSHVSDNAL 54
AL E GA L + D AL
Sbjct: 93 YEALAQELQGASPL---EIMDRAL 113
>01_06_1415 + 37171380-37171923,37172476-37172666,37173628-37173678
Length = 261
Score = 30.3 bits (65), Expect = 1.6
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = -3
Query: 358 VCAPEVDERA-QPAAREQCAQPAARKQCAQPAVREQCAQPAAREQCAQPA--VREQCAQY 188
+C D RA QP+ E + A RK+ AV CA R C A V A+
Sbjct: 143 LCVATWDTRAPQPSQIESAVRWALRKRSQNKAVYVHCAYGHGRSVCVMCALLVALGLAED 202
Query: 187 ARQK*MSARRQRHASNTCSLHGSALSCWS 101
+ R +R + + SLH +L W+
Sbjct: 203 WKAAEQMIREKRPSISMNSLHRKSLEEWA 231
>01_01_0493 +
3644587-3644917,3645150-3645233,3645584-3645798,
3645975-3646022,3646958-3647094,3647267-3647326,
3648166-3648172,3648262-3648448,3648619-3648728,
3648841-3648959,3649284-3649362
Length = 458
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 690 VVRSSRPQIKRHRLXRHCQSYSTVQSAACEQHVQYARQ 577
VVR PQ+ H+L + ST+ + C Q V YA +
Sbjct: 101 VVRGFYPQLSGHKLVKGLGMGSTLAATFCSQKVAYAEE 138
>12_02_0230 + 15973390-15974645,16002878-16003097
Length = 491
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 316 REQCAQPAARKQCAQPAVREQCAQPAAREQCAQPA-VREQCAQYARQK*MSAR 161
R Q +P A QPA REQ ++P C P ++C + R K + A+
Sbjct: 55 RNQAPRPVAAPTQQQPAKREQGSKPVVCFNCGDPGHYADKCPKPRRVKVVPAQ 107
>06_01_0199 +
1538124-1538485,1538997-1539076,1539198-1539357,
1539497-1539578,1540080-1540167,1540256-1540302,
1540623-1540865
Length = 353
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Frame = +2
Query: 377 TAGCAHCSRAAGCARSSTSG--AHTART-----ARVPLAARIARVPLPARARLLQTC 526
TA C+ +TSG A TAR AR+ L AR + ARARLL C
Sbjct: 27 TAACSDLRHITAIITGATSGIGAETARVLAKRGARLVLPARSLKAAAEARARLLAEC 83
>09_03_0117 -
12486672-12486818,12487438-12487488,12487583-12487729,
12488037-12488354,12488450-12488604,12488941-12489248,
12490644-12491038
Length = 506
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 302 PASGTQAVRAASGTRAVRAASGTRA--VRAASGTRAVRAVCAPE-VDER 165
P +GT R VRAA T A RAA+G VR++ A + VD R
Sbjct: 15 PGTGTATPRRRPVAATVRAALATSAEEARAATGAEVVRSIRARQIVDSR 63
>08_01_0441 +
3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 316 REQCAQPAARKQCAQPAVREQCAQPAAREQCAQPA-VREQCAQYARQK*MSAR 161
R Q +P A QPA REQ ++P C P ++C + R K + A+
Sbjct: 503 RNQAPRPVAAPVQQQPAKREQGSKPVVCFNCGDPGHYADKCPKPRRVKVVPAQ 555
>05_06_0026 -
25024807-25025300,25025432-25025495,25025567-25025662,
25025719-25025929,25026616-25026690,25026820-25027037
Length = 385
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +3
Query: 192 CAHCS-RTAGCA--HCSRAAGCAHCSRTAGCAHCLRAAGWA 305
C HC+ + + C +C AG +CS GC C A +A
Sbjct: 85 CKHCACKKSRCLKLYCPCFAGGGYCSEKCGCQPCFNKALYA 125
>04_01_0293 +
3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -3
Query: 316 REQCAQPAARKQCAQPAVREQCAQPAAREQCAQPA-VREQCAQYARQK 176
R Q +P A QPA REQ ++P C P ++C + R K
Sbjct: 282 RNQAPRPVAAPTQQQPAKREQGSKPVVCFNCGDPGHYADKCPKPRRVK 329
>11_06_0632 +
25674807-25675477,25676472-25677861,25677948-25678083,
25678185-25678282,25678470-25678535,25678699-25678827,
25679570-25679746,25680576-25680614
Length = 901
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 337 ERAQPAAREQCAQPAARKQCAQPA-VREQCAQPAAREQ--CAQPAVREQCAQYARQK*MS 167
+RAQ ARE+ A A K A RE+ A A + A+ A E+ Q AR++
Sbjct: 575 QRAQQEARERAAAEAKEKAARIAAEARERAASEAKERERAAAERAAAERVQQEARKRAER 634
Query: 166 ARRQRHAS 143
A +R A+
Sbjct: 635 AAVERAAA 642
>09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166
Length = 983
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -3
Query: 346 EVDERAQPAAREQCAQPAARKQCAQPAVREQCAQPAAREQCAQPAV-REQCAQYARQK*M 170
E +E A+ AAR + A+ AAR++ + A RE Q A R + A+ A Q +
Sbjct: 380 EAEEAARGAARARQAEEAAREEARLRQAEATTSSEATRETDRQEAADRLREAEEAAQVAV 439
Query: 169 SARRQRHAS 143
AR+ A+
Sbjct: 440 RARQAEEAA 448
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = -2
Query: 611 RHASNTCSMHVRSR*ARACSGTRATR-------AVCTSEADERAQVAAREQCAQPAVREQ 453
R A R R A A + + ATR A EA+E AQVA R + A+ A RE+
Sbjct: 392 RQAEEAAREEARLRQAEATTSSEATRETDRQEAADRLREAEEAAQVAVRARQAEEAAREE 451
>01_05_0287 -
20460956-20461282,20462051-20462201,20462285-20462519,
20462796-20463006,20463122-20463258,20463339-20463467,
20464558-20465359
Length = 663
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +3
Query: 204 SRTAGCAHCSRAAGCAHCSRTAGCAHCLR--AAGWAHCSRAAGCARSSTSGAHTARTARV 377
S +AG A A C C CLR AA A C+ AA R+ +G + + R+
Sbjct: 195 SASAGGATAFALAQCWGSLNATACGQCLRAAAAAAARCAPAAAEGRALYTGCYLRYSTRL 254
>10_08_0856 + 21099162-21099698,21100134-21101020,21101149-21101197
Length = 490
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -2
Query: 263 TRAVR--AASGTRAVRAASGTRAVRAVCAPEVDERAQAAAR 147
T A+R A +G+ A RAA+ A + CA E E A AA R
Sbjct: 94 TAALRSPAVAGSAAGRAAARATAYQHFCAGETAEEAAAAVR 134
>10_02_0072 - 4936950-4937363
Length = 137
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -2
Query: 305 RPASGTQAVRAASGTRAVRAASGTRAVRAAS-GTRAVRAVCAPEVDERA 162
RPA+G AVRA + R AA+ RA R RA P DE A
Sbjct: 75 RPAAGAAAVRADTKPRKHPAAATARAHRGVEHRRRAASRQTTPAKDESA 123
>05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608
Length = 325
Score = 28.3 bits (60), Expect = 6.3
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 308 VRPASGTQAV-RAASGTRAVRAASGTRAVRAASGTRAVRAVCAPEVDERAQAAAREQHVQ 132
V P AV R S T A A A+ V A A E RA AAARE+ +
Sbjct: 103 VCPTCADAAVGRVYSYTPAAAAGRRRTMDERAARVLLVAARLAHESISRAAAAAREEADR 162
Query: 131 SARLCALLLEHGADSL 84
+AR A+ +H + L
Sbjct: 163 AAREAAVARKHARELL 178
>04_04_0020 +
22182649-22182829,22183900-22183999,22184415-22184491,
22184718-22184809,22188655-22189767
Length = 520
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 566 ARACSGTRATRAVCTSEADE 507
A+AC+G R R+ C SE+D+
Sbjct: 35 AQACAGARMLRSACRSESDD 54
>02_02_0280 - 8515894-8517309
Length = 471
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = +3
Query: 237 AAGCAHCSRTAGCAHCLRAAGWAHCSRAAGCA-----RSSTSGAHTARTA 371
AAG A ++AG H + AG +RAA A + +GAH A+ A
Sbjct: 130 AAGAAAREKSAGATHGAKQAGSTAATRAADYAAAKGTEAKDAGAHAAQAA 179
>12_02_1036 -
25587313-25587890,25589209-25589272,25589356-25589448,
25589533-25589683,25590474-25590539,25590594-25590907
Length = 421
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +3
Query: 243 GCAHCS-RTAGCA--HCLRAAGWAHCSRAAGCARSSTSGAH--TARTARVPLAA 389
GC CS + + C +C+ A +HCS + GC H T +PL A
Sbjct: 113 GCKSCSCKKSKCLKLYCVCFASGSHCSESCGCDPCYNKSIHGVPRSTPALPLKA 166
>12_02_1031 +
25537495-25537552,25538774-25538836,25538966-25539279,
25539361-25539612,25539698-25540411
Length = 466
Score = 27.9 bits (59), Expect = 8.4
Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Frame = -2
Query: 302 PASGTQAVRAASGTRAVRAASGTRAVRAASGTRAVRAVCAPEVDERAQAAAREQHVQSAR 123
P + + A + AA+ R A A +A+CA + QA R Q V+ R
Sbjct: 113 PEAESSAAADVAEENEAAAAAAVRIQAAFRSYLARKALCALRGMVKLQAMVRGQLVR--R 170
Query: 122 LCALLLEHGADSLVTSHVSDNALRTSL---DKTRHARTPR 12
+ L +LV + A R L DK +HAR+PR
Sbjct: 171 QASTTLRR-MQALVAAQRRARAERLCLLDDDKDKHARSPR 209
>08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767
Length = 1041
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 368 CSRTAGCAHCSRAAGCARSSTSGAHTARTARVPLAARIARVPLPARA 508
C+R A A G A + +GAH + L +A LPA A
Sbjct: 56 CARAASAAGVGGGGGAAAGAGAGAHPLHCRALELCFSVALDRLPAAA 102
>06_01_0893 -
6834350-6834464,6835042-6835218,6835301-6835350,
6836348-6836416,6836495-6836593,6836681-6836759,
6837604-6837704,6838645-6838713,6839548-6839588,
6839793-6841159,6841472-6841575,6841914-6842351,
6843040-6843567
Length = 1078
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -2
Query: 257 AVRAASGTRAVRAASGTRAVRAVCAPEVDERAQAAAREQHVQSARLCALLLEHG 96
A ++S + + G AVR + +V E +AA+E + R+ A+LLE+G
Sbjct: 492 ANNSSSSSPSSSEVGGAPAVRRMKVKDVSEYMISAAKENPQIAERIHAVLLENG 545
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 294 AGWAHCSRAAGCARSSTSGAHT 359
A W CS AGCA SS S + T
Sbjct: 125 AAWVPCSACAGCAASSPSFSPT 146
>01_01_1161 +
9244628-9245748,9247696-9247828,9248233-9248448,
9249802-9249957,9250788-9250979,9251118-9251234,
9251822-9252193
Length = 768
Score = 27.9 bits (59), Expect = 8.4
Identities = 25/74 (33%), Positives = 33/74 (44%)
Frame = -2
Query: 236 TRAVRAASGTRAVRAVCAPEVDERAQAAAREQHVQSARLCALLLEHGADSLVTSHVSDNA 57
T V A T + +C R AAA + V SAR +LLE +D+ V V+
Sbjct: 177 TGVVSARKPTPSPSCLCG----RRRAAAAAGRPVLSARYW-ILLEEKSDTQVAFRVNLGD 231
Query: 56 LRTSLDKTRHARTP 15
+ S D RHA P
Sbjct: 232 YQWSCDHDRHATHP 245
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,215,146
Number of Sequences: 37544
Number of extensions: 275663
Number of successful extensions: 1771
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1724
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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