Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc18o02
         (364 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058349-1|AAL13578.1|  429|Drosophila melanogaster GH12207p pro...    27   5.6  
AE013599-185|AAF57364.1|  429|Drosophila melanogaster CG3174-PA ...    27   5.6  
AY180916-3|AAN87268.1|  994|Drosophila melanogaster ORF3 protein.      27   7.4  
AF432229-1|AAL27708.1|  429|Drosophila melanogaster flavin-conta...    27   7.4  

>AY058349-1|AAL13578.1|  429|Drosophila melanogaster GH12207p
           protein.
          Length = 429

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 222 KKPINMPNYSYTPTIGRTYVYDNKYYKNLGCLIKNAKRKKHL-VEHE 85
           K+ +  P+YSY   I  +++  N+  + L    ++ K K H+ ++HE
Sbjct: 75  KEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHE 121


>AE013599-185|AAF57364.1|  429|Drosophila melanogaster CG3174-PA
           protein.
          Length = 429

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 222 KKPINMPNYSYTPTIGRTYVYDNKYYKNLGCLIKNAKRKKHL-VEHE 85
           K+ +  P+YSY   I  +++  N+  + L    ++ K K H+ ++HE
Sbjct: 75  KEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKLKAHIKLQHE 121


>AY180916-3|AAN87268.1|  994|Drosophila melanogaster ORF3 protein.
          Length = 994

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = +1

Query: 118 VFDKT--AQVFVIFIVVHVSTPDGGGV*IIR---HIYRFFYYKTVTKTV-KYLFIC 267
           + DK   AQ+  I    H    +GG   I R    I RF+Y+  +TKT+ KY+  C
Sbjct: 642 IIDKNDEAQIKEILTKFHDDPIEGGHTGISRTQSKIKRFYYWPQMTKTISKYVKTC 697


>AF432229-1|AAL27708.1|  429|Drosophila melanogaster
           flavin-containing monooxygenaseFMO-2 protein.
          Length = 429

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 222 KKPINMPNYSYTPTIGRTYVYDNKYYKNLGCLIKNAKRKKHL-VEHE 85
           K+ +  P+YSY   I  +++  N+  + L    ++ K K H+ ++HE
Sbjct: 75  KEVMGYPDYSYPDDITESFITSNQVLEFLRSYAEHFKVKPHIKLQHE 121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,961,960
Number of Sequences: 53049
Number of extensions: 296621
Number of successful extensions: 807
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)