BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18n23
(681 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052022-1|AAK93446.1| 482|Drosophila melanogaster LD47549p pro... 153 2e-37
AE014297-2717|AAN13813.1| 482|Drosophila melanogaster CG4572-PC... 153 2e-37
AE014297-2716|AAN13812.1| 482|Drosophila melanogaster CG4572-PB... 153 2e-37
AE014297-2715|AAF55705.1| 482|Drosophila melanogaster CG4572-PA... 153 2e-37
AY051562-1|AAK92986.1| 446|Drosophila melanogaster GH21114p pro... 72 6e-13
AE014296-126|AAF47405.1| 446|Drosophila melanogaster CG3344-PA ... 72 6e-13
BT016041-1|AAV36926.1| 438|Drosophila melanogaster LP20617p pro... 68 1e-11
AE014296-127|AAN11449.1| 439|Drosophila melanogaster CG32483-PA... 68 1e-11
BT022892-1|AAY55308.1| 425|Drosophila melanogaster IP12506p pro... 66 6e-11
BT022218-1|AAY54634.1| 423|Drosophila melanogaster IP12406p pro... 66 6e-11
AE014134-2652|AAF53491.2| 427|Drosophila melanogaster CG31821-P... 66 6e-11
AE014134-2651|AAN10921.1| 427|Drosophila melanogaster CG31823-P... 62 5e-10
AE014134-2844|AAZ66472.1| 180|Drosophila melanogaster CG33928-P... 36 0.068
AY075200-1|AAR82834.1| 251|Drosophila melanogaster AT13896p pro... 30 2.5
U23485-1|AAA85858.1| 1525|Drosophila melanogaster receptor-type ... 30 3.4
L35598-1|AAA74408.1| 1525|Drosophila melanogaster receptor guany... 30 3.4
BT011062-1|AAR31133.1| 1525|Drosophila melanogaster LD12174p pro... 30 3.4
AE014296-3206|AAV50027.1| 1525|Drosophila melanogaster CG8742-PC... 30 3.4
AE014296-3205|AAV50029.1| 1525|Drosophila melanogaster CG8742-PB... 30 3.4
AE014296-3204|AAF49117.1| 1525|Drosophila melanogaster CG8742-PA... 30 3.4
BT010046-1|AAQ22515.1| 204|Drosophila melanogaster LD31278p pro... 29 4.5
AE014134-1271|AAF52511.1| 204|Drosophila melanogaster CG5181-PA... 29 4.5
L23764-1|AAB00099.1| 79|Drosophila melanogaster adipokinetic h... 29 5.9
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 29 5.9
AE014296-775|AAF47846.1| 79|Drosophila melanogaster CG1171-PA ... 29 5.9
AY118543-1|AAM49912.1| 705|Drosophila melanogaster LD28410p pro... 29 7.8
AF241270-1|AAF81195.1| 705|Drosophila melanogaster frizzled 4 p... 29 7.8
AE014298-1020|AAF46245.2| 705|Drosophila melanogaster CG4626-PB... 29 7.8
AE014298-1019|AAN09202.1| 705|Drosophila melanogaster CG4626-PA... 29 7.8
>AY052022-1|AAK93446.1| 482|Drosophila melanogaster LD47549p
protein.
Length = 482
Score = 153 bits (371), Expect = 2e-37
Identities = 77/142 (54%), Positives = 99/142 (69%), Gaps = 3/142 (2%)
Frame = +1
Query: 256 FPNVYPRVKLDARPNDSAGDPLMLTPFLKNESIAL--AQELSRVSLTETLGIESHAGFFT 429
F N YPR + D G+PL LTP + N S++ Q+L+RV ++ G+ES++G+ T
Sbjct: 34 FINPYPRYQFFDDGVDP-GEPLFLTPLINNASMSKQEVQKLARVVGSQFHGVESYSGYLT 92
Query: 430 VDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPL-VAGKDGFAKRE 606
VD F SNM+FWYFP + E APV+LWLQGGPGASSLFGLFTE GPL + G KR
Sbjct: 93 VDPGFKSNMFFWYFPAEQEPEYAPVVLWLQGGPGASSLFGLFTENGPLELDGHGKLQKRN 152
Query: 607 HHWAKNYHLIFIDNPVGTGFSF 672
+ W+K ++LI+IDNPVGTGFSF
Sbjct: 153 YTWSKTHNLIYIDNPVGTGFSF 174
>AE014297-2717|AAN13813.1| 482|Drosophila melanogaster CG4572-PC,
isoform C protein.
Length = 482
Score = 153 bits (371), Expect = 2e-37
Identities = 77/142 (54%), Positives = 99/142 (69%), Gaps = 3/142 (2%)
Frame = +1
Query: 256 FPNVYPRVKLDARPNDSAGDPLMLTPFLKNESIAL--AQELSRVSLTETLGIESHAGFFT 429
F N YPR + D G+PL LTP + N S++ Q+L+RV ++ G+ES++G+ T
Sbjct: 34 FINPYPRYQFFDDGVDP-GEPLFLTPLINNASMSKQEVQKLARVVGSQFHGVESYSGYLT 92
Query: 430 VDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPL-VAGKDGFAKRE 606
VD F SNM+FWYFP + E APV+LWLQGGPGASSLFGLFTE GPL + G KR
Sbjct: 93 VDPGFKSNMFFWYFPAEQEPEYAPVVLWLQGGPGASSLFGLFTENGPLELDGHGKLQKRN 152
Query: 607 HHWAKNYHLIFIDNPVGTGFSF 672
+ W+K ++LI+IDNPVGTGFSF
Sbjct: 153 YTWSKTHNLIYIDNPVGTGFSF 174
>AE014297-2716|AAN13812.1| 482|Drosophila melanogaster CG4572-PB,
isoform B protein.
Length = 482
Score = 153 bits (371), Expect = 2e-37
Identities = 77/142 (54%), Positives = 99/142 (69%), Gaps = 3/142 (2%)
Frame = +1
Query: 256 FPNVYPRVKLDARPNDSAGDPLMLTPFLKNESIAL--AQELSRVSLTETLGIESHAGFFT 429
F N YPR + D G+PL LTP + N S++ Q+L+RV ++ G+ES++G+ T
Sbjct: 34 FINPYPRYQFFDDGVDP-GEPLFLTPLINNASMSKQEVQKLARVVGSQFHGVESYSGYLT 92
Query: 430 VDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPL-VAGKDGFAKRE 606
VD F SNM+FWYFP + E APV+LWLQGGPGASSLFGLFTE GPL + G KR
Sbjct: 93 VDPGFKSNMFFWYFPAEQEPEYAPVVLWLQGGPGASSLFGLFTENGPLELDGHGKLQKRN 152
Query: 607 HHWAKNYHLIFIDNPVGTGFSF 672
+ W+K ++LI+IDNPVGTGFSF
Sbjct: 153 YTWSKTHNLIYIDNPVGTGFSF 174
>AE014297-2715|AAF55705.1| 482|Drosophila melanogaster CG4572-PA,
isoform A protein.
Length = 482
Score = 153 bits (371), Expect = 2e-37
Identities = 77/142 (54%), Positives = 99/142 (69%), Gaps = 3/142 (2%)
Frame = +1
Query: 256 FPNVYPRVKLDARPNDSAGDPLMLTPFLKNESIAL--AQELSRVSLTETLGIESHAGFFT 429
F N YPR + D G+PL LTP + N S++ Q+L+RV ++ G+ES++G+ T
Sbjct: 34 FINPYPRYQFFDDGVDP-GEPLFLTPLINNASMSKQEVQKLARVVGSQFHGVESYSGYLT 92
Query: 430 VDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPL-VAGKDGFAKRE 606
VD F SNM+FWYFP + E APV+LWLQGGPGASSLFGLFTE GPL + G KR
Sbjct: 93 VDPGFKSNMFFWYFPAEQEPEYAPVVLWLQGGPGASSLFGLFTENGPLELDGHGKLQKRN 152
Query: 607 HHWAKNYHLIFIDNPVGTGFSF 672
+ W+K ++LI+IDNPVGTGFSF
Sbjct: 153 YTWSKTHNLIYIDNPVGTGFSF 174
>AY051562-1|AAK92986.1| 446|Drosophila melanogaster GH21114p
protein.
Length = 446
Score = 72.1 bits (169), Expect = 6e-13
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Frame = +1
Query: 430 VDEKFNSNMYFWYF---PPLSKNEAAPVLLWLQGGPGASSL-FGLFTEVGPLVAGKDGFA 597
VD + ++M++W + +S P+ +WLQGGPGASS +G F E+GPL DG +
Sbjct: 37 VDVRTGAHMFYWLYYTTANVSSYTERPLAIWLQGGPGASSTGYGNFEELGPLKL--DG-S 93
Query: 598 KREHHWAKNYHLIFIDNPVGTGFSF 672
R+ W K+ +++FIDNPVG+GFS+
Sbjct: 94 YRDWTWVKDMNVMFIDNPVGSGFSY 118
>AE014296-126|AAF47405.1| 446|Drosophila melanogaster CG3344-PA
protein.
Length = 446
Score = 72.1 bits (169), Expect = 6e-13
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Frame = +1
Query: 430 VDEKFNSNMYFWYF---PPLSKNEAAPVLLWLQGGPGASSL-FGLFTEVGPLVAGKDGFA 597
VD + ++M++W + +S P+ +WLQGGPGASS +G F E+GPL DG +
Sbjct: 37 VDVRTGAHMFYWLYYTTANVSSYTERPLAIWLQGGPGASSTGYGNFEELGPLKL--DG-S 93
Query: 598 KREHHWAKNYHLIFIDNPVGTGFSF 672
R+ W K+ +++FIDNPVG+GFS+
Sbjct: 94 YRDWTWVKDMNVMFIDNPVGSGFSY 118
>BT016041-1|AAV36926.1| 438|Drosophila melanogaster LP20617p
protein.
Length = 438
Score = 68.1 bits (159), Expect = 1e-11
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Frame = +1
Query: 430 VDEKFNSNMYFWYF---PPLSKNEAAPVLLWLQGGPGASSL-FGLFTEVGPLVAGKDGFA 597
VD + ++M++W + +S P+ +WLQGGPGASS +G F E+GP+ D
Sbjct: 31 VDVRPGAHMFYWLYYTTANVSSYTERPLAIWLQGGPGASSTGYGNFEELGPVDLYGDW-- 88
Query: 598 KREHHWAKNYHLIFIDNPVGTGFSF 672
R W K+ +++FIDNPVG+GFS+
Sbjct: 89 -RSWTWVKDMNVLFIDNPVGSGFSY 112
>AE014296-127|AAN11449.1| 439|Drosophila melanogaster CG32483-PA
protein.
Length = 439
Score = 68.1 bits (159), Expect = 1e-11
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Frame = +1
Query: 430 VDEKFNSNMYFWYF---PPLSKNEAAPVLLWLQGGPGASSL-FGLFTEVGPLVAGKDGFA 597
VD + ++M++W + +S P+ +WLQGGPGASS +G F E+GP+ D
Sbjct: 32 VDVRPGAHMFYWLYYTTANVSSYTERPLAIWLQGGPGASSTGYGNFEELGPVDLYGDW-- 89
Query: 598 KREHHWAKNYHLIFIDNPVGTGFSF 672
R W K+ +++FIDNPVG+GFS+
Sbjct: 90 -RSWTWVKDMNVLFIDNPVGSGFSY 113
>BT022892-1|AAY55308.1| 425|Drosophila melanogaster IP12506p
protein.
Length = 425
Score = 65.7 bits (153), Expect = 6e-11
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Frame = +1
Query: 430 VDEKFNSNMYFWYF---PPLSKNEAAPVLLWLQGGPGASSL-FGLFTEVGPLVAGKDGFA 597
VD + ++M++W + +S P++LWLQGGPG SS G F E+GP+
Sbjct: 32 VDVRDGAHMFYWLYYTTANVSSYTDRPLVLWLQGGPGGSSTALGNFQELGPVDTNGQ--- 88
Query: 598 KREHHWAKNYHLIFIDNPVGTGFSF 672
R+ +W + +++FIDNPVG+GFS+
Sbjct: 89 PRDGNWVQYVNVLFIDNPVGSGFSY 113
>BT022218-1|AAY54634.1| 423|Drosophila melanogaster IP12406p
protein.
Length = 423
Score = 65.7 bits (153), Expect = 6e-11
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Frame = +1
Query: 430 VDEKFNSNMYFWYF---PPLSKNEAAPVLLWLQGGPGASSL-FGLFTEVGPLVAGKDGFA 597
VD + ++M++W + +S P++LWLQGGPG SS G F E+GP+
Sbjct: 30 VDVRDGAHMFYWLYYTTANVSSYTDRPLVLWLQGGPGGSSTALGNFQELGPVDTNGQ--- 86
Query: 598 KREHHWAKNYHLIFIDNPVGTGFSF 672
R+ +W + +++FIDNPVG+GFS+
Sbjct: 87 PRDGNWVQYVNVLFIDNPVGSGFSY 111
>AE014134-2652|AAF53491.2| 427|Drosophila melanogaster CG31821-PA
protein.
Length = 427
Score = 65.7 bits (153), Expect = 6e-11
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Frame = +1
Query: 430 VDEKFNSNMYFWYF---PPLSKNEAAPVLLWLQGGPGASSL-FGLFTEVGPLVAGKDGFA 597
VD + ++M++W + +S P++LWLQGGPG SS G F E+GP+
Sbjct: 34 VDVRDGAHMFYWLYYTTANVSSYTDRPLVLWLQGGPGGSSTALGNFQELGPVDTNGQ--- 90
Query: 598 KREHHWAKNYHLIFIDNPVGTGFSF 672
R+ +W + +++FIDNPVG+GFS+
Sbjct: 91 PRDGNWVQYVNVLFIDNPVGSGFSY 115
>AE014134-2651|AAN10921.1| 427|Drosophila melanogaster CG31823-PA
protein.
Length = 427
Score = 62.5 bits (145), Expect = 5e-10
Identities = 31/86 (36%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Frame = +1
Query: 430 VDEKFNSNMYFWYF---PPLSKNEAAPVLLWLQGGPG-ASSLFGLFTEVGPL-VAGKDGF 594
V+ + +++++W +S P+++WLQGGPG AS+ G+F ++GP+ + GK
Sbjct: 40 VEVRKGAHLFYWLLYTTANVSHFIERPLVIWLQGGPGVASTGSGIFEQLGPIDIEGKT-- 97
Query: 595 AKREHHWAKNYHLIFIDNPVGTGFSF 672
RE W K+ +++F+D+PVGTGF++
Sbjct: 98 --RESSWLKHVNVLFVDSPVGTGFAY 121
>AE014134-2844|AAZ66472.1| 180|Drosophila melanogaster CG33928-PA
protein.
Length = 180
Score = 35.5 bits (78), Expect = 0.068
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +3
Query: 63 YIYLKTLVTKSPFNNYSIRNIILSIRTNSLKLFTR---YDGCEMEASAERSAVCFVFFYF 233
Y+ +K + K P +++++ N+ L R+N L F + +DGC+M A+ V F+F F
Sbjct: 58 YLSVKVRLYKIPVHHFTV-NLGLHKRSNGLMPFNQNFTFDGCKMVANVGNPMVLFLFALF 116
Query: 234 VP 239
P
Sbjct: 117 KP 118
>AY075200-1|AAR82834.1| 251|Drosophila melanogaster AT13896p
protein.
Length = 251
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 446 IQICTFGISRLYRRTKLHRFCCGCKEVPG-PAPYSGSLRKSGRW 574
++I F +S L R K+HR C C + PG Y ++ ++ RW
Sbjct: 4 VKIQNFTVSVLVVRWKMHRRCIICGQEPGEQCVYPRNMSEARRW 47
>U23485-1|AAA85858.1| 1525|Drosophila melanogaster receptor-type
guanylate cyclase protein.
Length = 1525
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 253 KFPNVYPRVKLDARPNDSAGDPLMLT 330
K PN+ P V LD R ND+ GD ++ T
Sbjct: 59 KDPNLLPNVYLDLRWNDTKGDTVLAT 84
>L35598-1|AAA74408.1| 1525|Drosophila melanogaster receptor guanylyl
cyclase protein.
Length = 1525
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 253 KFPNVYPRVKLDARPNDSAGDPLMLT 330
K PN+ P V LD R ND+ GD ++ T
Sbjct: 59 KDPNLLPNVYLDLRWNDTKGDTVLAT 84
>BT011062-1|AAR31133.1| 1525|Drosophila melanogaster LD12174p
protein.
Length = 1525
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 253 KFPNVYPRVKLDARPNDSAGDPLMLT 330
K PN+ P V LD R ND+ GD ++ T
Sbjct: 59 KDPNLLPNVYLDLRWNDTKGDTVLAT 84
>AE014296-3206|AAV50027.1| 1525|Drosophila melanogaster CG8742-PC,
isoform C protein.
Length = 1525
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 253 KFPNVYPRVKLDARPNDSAGDPLMLT 330
K PN+ P V LD R ND+ GD ++ T
Sbjct: 59 KDPNLLPNVYLDLRWNDTKGDTVLAT 84
>AE014296-3205|AAV50029.1| 1525|Drosophila melanogaster CG8742-PB,
isoform B protein.
Length = 1525
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 253 KFPNVYPRVKLDARPNDSAGDPLMLT 330
K PN+ P V LD R ND+ GD ++ T
Sbjct: 59 KDPNLLPNVYLDLRWNDTKGDTVLAT 84
>AE014296-3204|AAF49117.1| 1525|Drosophila melanogaster CG8742-PA,
isoform A protein.
Length = 1525
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 253 KFPNVYPRVKLDARPNDSAGDPLMLT 330
K PN+ P V LD R ND+ GD ++ T
Sbjct: 59 KDPNLLPNVYLDLRWNDTKGDTVLAT 84
>BT010046-1|AAQ22515.1| 204|Drosophila melanogaster LD31278p
protein.
Length = 204
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 590 PSLPATSGPTSVKSPNKELAPGPPCSHSKTGAA 492
P LPA G T + P APG P + S A
Sbjct: 138 PGLPAKGGATGIPQPAVAAAPGAPATQSAVTTA 170
>AE014134-1271|AAF52511.1| 204|Drosophila melanogaster CG5181-PA
protein.
Length = 204
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 590 PSLPATSGPTSVKSPNKELAPGPPCSHSKTGAA 492
P LPA G T + P APG P + S A
Sbjct: 138 PGLPAKGGATGIPQPAVAAAPGAPATQSAVTTA 170
>L23764-1|AAB00099.1| 79|Drosophila melanogaster adipokinetic
hormone protein.
Length = 79
Score = 29.1 bits (62), Expect = 5.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 567 PDFRKEPE*GAGPGTSLQPQQNRC 496
PD+ K GAGPGT + QQ C
Sbjct: 28 PDWGKRSVGGAGPGTFFETQQGNC 51
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 551 SPNK-ELAPGPPCSHSKTGAASFFDKGGKYQKYI 453
+PNK E PC HSK SF G Y+K+I
Sbjct: 418 NPNKIEAIKNFPCPHSKKSIKSFLGLLGYYRKFI 451
>AE014296-775|AAF47846.1| 79|Drosophila melanogaster CG1171-PA
protein.
Length = 79
Score = 29.1 bits (62), Expect = 5.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 567 PDFRKEPE*GAGPGTSLQPQQNRC 496
PD+ K GAGPGT + QQ C
Sbjct: 28 PDWGKRSVGGAGPGTFFETQQGNC 51
>AY118543-1|AAM49912.1| 705|Drosophila melanogaster LD28410p
protein.
Length = 705
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -1
Query: 291 SVQLHSWINIRKFSAVQREQSRKKQNTRHCAQQRLPFHSHHN 166
S+ L+ N +V +Q + H QQ FH HHN
Sbjct: 622 SISLNQMSNYSLGRSVHHQQRHSPHHHHHQQQQHHQFHPHHN 663
>AF241270-1|AAF81195.1| 705|Drosophila melanogaster frizzled 4
protein.
Length = 705
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -1
Query: 291 SVQLHSWINIRKFSAVQREQSRKKQNTRHCAQQRLPFHSHHN 166
S+ L+ N +V +Q + H QQ FH HHN
Sbjct: 622 SISLNQMSNYSLGRSVHHQQRHSPHHHHHQQQQHHQFHPHHN 663
>AE014298-1020|AAF46245.2| 705|Drosophila melanogaster CG4626-PB,
isoform B protein.
Length = 705
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -1
Query: 291 SVQLHSWINIRKFSAVQREQSRKKQNTRHCAQQRLPFHSHHN 166
S+ L+ N +V +Q + H QQ FH HHN
Sbjct: 622 SISLNQMSNYSLGRSVHHQQRHSPHHHHHQQQQHHQFHPHHN 663
>AE014298-1019|AAN09202.1| 705|Drosophila melanogaster CG4626-PA,
isoform A protein.
Length = 705
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -1
Query: 291 SVQLHSWINIRKFSAVQREQSRKKQNTRHCAQQRLPFHSHHN 166
S+ L+ N +V +Q + H QQ FH HHN
Sbjct: 622 SISLNQMSNYSLGRSVHHQQRHSPHHHHHQQQQHHQFHPHHN 663
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,836,267
Number of Sequences: 53049
Number of extensions: 664122
Number of successful extensions: 1916
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1900
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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