Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18n23
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 81 7e-16
AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical ... 79 2e-15
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 77 2e-14
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 77 2e-14
U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z49127-6|CAA88947.1| 454|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AL021474-4|CAD54164.1| 445|Caenorhabditis elegans Hypothetical ... 68 5e-12
U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical pr... 58 4e-09
U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AC024831-8|AAK72079.3| 362|Caenorhabditis elegans Serpentine re... 30 1.3
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 29 3.1
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 29 3.1
Z36753-11|CAE17918.1| 68|Caenorhabditis elegans Hypothetical p... 29 4.1
AC024831-6|AAY86308.1| 351|Caenorhabditis elegans Hypothetical ... 29 4.1
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 28 5.4
AF067950-6|AAG24156.2| 372|Caenorhabditis elegans Serpentine re... 28 5.4
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 81.0 bits (191), Expect = 7e-16
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Frame = +1
Query: 385 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEV 564
+T + H+G+ + +++W+ S NE P++LWLQGGPG +S GLF+E+
Sbjct: 1674 VTWNVNFMQHSGYLQATR--GNKLFYWFVESQSGNEGDPIILWLQGGPGCASTGGLFSEI 1731
Query: 565 GPLVAGKDGFAKRE--HHWAKNYHLIFIDNPVGTGFSF 672
GP DG E + W K H++ ID+P G GFS+
Sbjct: 1732 GPFFVNPDGETLFENIYSWNKAAHILIIDSPRGVGFSY 1769
Score = 70.9 bits (166), Expect = 8e-13
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Frame = +1
Query: 358 LAQELSRVSLTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAS 537
L +L +S T T + ++G+ +D +++++W + + AP++LWL GGPG S
Sbjct: 28 LVNDLPGLSFTPTF--KQYSGY--LDGSQGNHLHYWLVESQTNPQTAPIVLWLNGGPGCS 83
Query: 538 SLFGLFTEVGPLVAGKDGFAKRE--HHWAKNYHLIFIDNPVGTGFSFHRQ 681
SL GL +E GP KDG E + W K +++F+++P GFS+ +
Sbjct: 84 SLLGLLSENGPYRIQKDGVTVIENVNSWNKAANVLFLESPRDVGFSYREK 133
Score = 63.3 bits (147), Expect = 2e-10
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Frame = +1
Query: 136 YELIA*NYLLVMMAVKWKPLLSAVPCV-LFFSTLFPLNGAKFPNVYPRVKLDARPNDSAG 312
Y+ + + L V A P+ P + +F++ L+ NG + N P L A P S
Sbjct: 504 YQQFSIDLLTVKGAGHMVPMDRPGPALQIFYNYLYNTNGG-YSNQVP-YDLTATPLRSQ- 560
Query: 313 DPLMLTPFLKNESIALAQELSRV-SLTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKN 489
L P K + A + + +T L + ++G+ ++ + +++W+
Sbjct: 561 ---FLAPPQKTWTRKQADRVWNLPGITYGLNFKQYSGY--LNGVTGNYLHYWFVESQGNP 615
Query: 490 EAAPVLLWLQGGPGASSLFGLFTEVGPLVAGKDG--FAKREHHWAKNYHLIFIDNPVGTG 663
P++LWL GGPG S L + TE+GP DG + + W K ++IF+++P G G
Sbjct: 616 TTDPLVLWLTGGPGCSGLMAMLTELGPFHPNPDGKTLFENVYSWNKAANVIFLESPRGVG 675
Query: 664 FS 669
FS
Sbjct: 676 FS 677
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +1
Query: 385 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEV 564
LT T + ++G+ + +++W P++LWL GGPG SS+ G E+
Sbjct: 1141 LTFTPNFKQYSGYLNASA--GNYLHYWLVESQLNATYDPLILWLNGGPGCSSIGGFLEEL 1198
Query: 565 GPLVAGKDGFAKREH--HWAKNYHLIFIDNPVGTGFSF 672
GP DG E+ W K +++F++ P G+SF
Sbjct: 1199 GPFHVNADGKTLFENTFSWNKAGNVLFLEAPRDVGYSF 1236
>AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical
protein Y40D12A.2 protein.
Length = 512
Score = 79.4 bits (187), Expect = 2e-15
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Frame = +1
Query: 319 LMLTPFLKNESIALAQELSRV-SLTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEA 495
L +T F + Q+++ + +LTE L + +AG+ ++ + +++WY E
Sbjct: 5 LFITLFALGSTAPADQQITSLPNLTEPLRSKHYAGYLSISDV--KQLFYWYVESEESPET 62
Query: 496 APVLLWLQGGPGASSLFGLFTEVGPLVAGKDGFAKREHHWAKN--YHLIFIDNPVGTGFS 669
APV+LWL GGPG +S+ GLF E+GP G + W N ++I++D P G GFS
Sbjct: 63 APVVLWLNGGPGCASMEGLFIEMGPFRVRNYGEEVNRNPWTWNRIANIIYLDAPAGVGFS 122
Query: 670 FH 675
++
Sbjct: 123 YY 124
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 76.6 bits (180), Expect = 2e-14
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Frame = +1
Query: 247 GAKFPNVYPRVKLD-ARPNDSAGDP--LMLTPFLKNESIALAQELSRVSLTETLGIESHA 417
G +P V + ++ A P A D + P N++ LS LT + +
Sbjct: 984 GVTYPFVAKKDVVEVAEPGTIAADEHGSQIYPTALNDAAKADMILSLPGLTFNVTYRMFS 1043
Query: 418 GFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLVAGKDG-- 591
G+ T DE +++++W+ + PV+LWL GGPG SSL G FTE+GP DG
Sbjct: 1044 GYLTADETPLNHLFYWFVESQNDPVNDPVVLWLNGGPGCSSLGGFFTELGPFHPNDDGGQ 1103
Query: 592 -FAKREHHWAKNYHLIFIDNPVGTGFSF 672
+ W K ++IF++ P GFS+
Sbjct: 1104 TLYENVFSWNKKANVIFLEAPAKVGFSY 1131
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +1
Query: 385 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEV 564
LT + ++G+ + ++W+ + +PVLLWL GGPG+SSL+G+ TE
Sbjct: 510 LTYQINFNQYSGYLNASD--THRFHYWFVESQNDPTNSPVLLWLNGGPGSSSLWGMLTEN 567
Query: 565 GPLVAGKDGFAKRE--HHWAKNYHLIFIDNPVGTGFSF 672
GP KDG E H W K +++++++P G+S+
Sbjct: 568 GPFRPNKDGQTLYENVHSWNKFANVLYLESPHQVGYSY 605
Score = 68.5 bits (160), Expect = 4e-12
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +1
Query: 406 ESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLVAGK 585
+ ++GF +D +++W + P+LLWL GGPG+SSL GLF E GP K
Sbjct: 1563 KQYSGF--LDGLSGHKVHYWLVESENNPSTDPLLLWLNGGPGSSSLMGLFEENGPFRVSK 1620
Query: 586 DG--FAKREHHWAKNYHLIFIDNPVGTGFSF 672
D ++ + W K +++++++P+G G+S+
Sbjct: 1621 DSQTLSRNPYSWNKFANVLYLESPIGVGYSY 1651
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +1
Query: 397 LGIESHAGFFTVDEKFN-SNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPL 573
+ + +AG+ D N +N+++W +LLW+ GGPG SS+FG E+GP
Sbjct: 44 VNFKQYAGYLNSDPNKNYNNLHYWLIESQLTPSNDTLLLWINGGPGCSSVFGQIQEIGPF 103
Query: 574 VAGKDGFAKREH--HWAKNYHLIFIDNPVGTGFSFHR 678
D E+ W K +L+ ID P G GFS+ +
Sbjct: 104 HVSSDSQTVYENVFAWNKVSNLLAIDGP-GAGFSWQQ 139
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 76.6 bits (180), Expect = 2e-14
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Frame = +1
Query: 247 GAKFPNVYPRVKLD-ARPNDSAGDP--LMLTPFLKNESIALAQELSRVSLTETLGIESHA 417
G +P V + ++ A P A D + P N++ LS LT + +
Sbjct: 984 GVTYPFVAKKDVVEVAEPGTIAADEHGSQIYPTALNDAAKADMILSLPGLTFNVTYRMFS 1043
Query: 418 GFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLVAGKDG-- 591
G+ T DE +++++W+ + PV+LWL GGPG SSL G FTE+GP DG
Sbjct: 1044 GYLTADETPLNHLFYWFVESQNDPVNDPVVLWLNGGPGCSSLGGFFTELGPFHPNDDGGQ 1103
Query: 592 -FAKREHHWAKNYHLIFIDNPVGTGFSF 672
+ W K ++IF++ P GFS+
Sbjct: 1104 TLYENVFSWNKKANVIFLEAPAKVGFSY 1131
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +1
Query: 385 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEV 564
LT + ++G+ + ++W+ + +PVLLWL GGPG+SSL+G+ TE
Sbjct: 510 LTYQINFNQYSGYLNASD--THRFHYWFVESQNDPTNSPVLLWLNGGPGSSSLWGMLTEN 567
Query: 565 GPLVAGKDGFAKRE--HHWAKNYHLIFIDNPVGTGFSF 672
GP KDG E H W K +++++++P G+S+
Sbjct: 568 GPFRPNKDGQTLYENVHSWNKFANVLYLESPHQVGYSY 605
Score = 68.5 bits (160), Expect = 4e-12
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +1
Query: 406 ESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLVAGK 585
+ ++GF +D +++W + P+LLWL GGPG+SSL GLF E GP K
Sbjct: 1563 KQYSGF--LDGLSGHKVHYWLVESENNPSTDPLLLWLNGGPGSSSLMGLFEENGPFRVSK 1620
Query: 586 DG--FAKREHHWAKNYHLIFIDNPVGTGFSF 672
D ++ + W K +++++++P+G G+S+
Sbjct: 1621 DSQTLSRNPYSWNKFANVLYLESPIGVGYSY 1651
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +1
Query: 397 LGIESHAGFFTVDEKFN-SNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPL 573
+ + +AG+ D N +N+++W +LLW+ GGPG SS+FG E+GP
Sbjct: 44 VNFKQYAGYLNSDPNKNYNNLHYWLIESQLTPSNDTLLLWINGGPGCSSVFGQIQEIGPF 103
Query: 574 VAGKDGFAKREH--HWAKNYHLIFIDNPVGTGFSFHR 678
D E+ W K +L+ ID P G GFS+ +
Sbjct: 104 HVSSDSQTVYENVFAWNKVSNLLAIDGP-GAGFSWQQ 139
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 76.6 bits (180), Expect = 2e-14
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Frame = +1
Query: 247 GAKFPNVYPRVKLD-ARPNDSAGDP--LMLTPFLKNESIALAQELSRVSLTETLGIESHA 417
G +P V + ++ A P A D + P N++ LS LT + +
Sbjct: 984 GVTYPFVAKKDVVEVAEPGTIAADEHGSQIYPTALNDAAKADMILSLPGLTFNVTYRMFS 1043
Query: 418 GFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLVAGKDG-- 591
G+ T DE +++++W+ + PV+LWL GGPG SSL G FTE+GP DG
Sbjct: 1044 GYLTADETPLNHLFYWFVESQNDPVNDPVVLWLNGGPGCSSLGGFFTELGPFHPNDDGGQ 1103
Query: 592 -FAKREHHWAKNYHLIFIDNPVGTGFSF 672
+ W K ++IF++ P GFS+
Sbjct: 1104 TLYENVFSWNKKANVIFLEAPAKVGFSY 1131
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +1
Query: 385 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEV 564
LT + ++G+ + ++W+ + +PVLLWL GGPG+SSL+G+ TE
Sbjct: 510 LTYQINFNQYSGYLNASD--THRFHYWFVESQNDPTNSPVLLWLNGGPGSSSLWGMLTEN 567
Query: 565 GPLVAGKDGFAKRE--HHWAKNYHLIFIDNPVGTGFSF 672
GP KDG E H W K +++++++P G+S+
Sbjct: 568 GPFRPNKDGQTLYENVHSWNKFANVLYLESPHQVGYSY 605
Score = 68.5 bits (160), Expect = 4e-12
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +1
Query: 406 ESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLVAGK 585
+ ++GF +D +++W + P+LLWL GGPG+SSL GLF E GP K
Sbjct: 1563 KQYSGF--LDGLSGHKVHYWLVESENNPSTDPLLLWLNGGPGSSSLMGLFEENGPFRVSK 1620
Query: 586 DG--FAKREHHWAKNYHLIFIDNPVGTGFSF 672
D ++ + W K +++++++P+G G+S+
Sbjct: 1621 DSQTLSRNPYSWNKFANVLYLESPIGVGYSY 1651
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +1
Query: 397 LGIESHAGFFTVDEKFN-SNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPL 573
+ + +AG+ D N +N+++W +LLW+ GGPG SS+FG E+GP
Sbjct: 44 VNFKQYAGYLNSDPNKNYNNLHYWLIESQLTPSNDTLLLWINGGPGCSSVFGQIQEIGPF 103
Query: 574 VAGKDGFAKREH--HWAKNYHLIFIDNPVGTGFSFHR 678
D E+ W K +L+ ID P G GFS+ +
Sbjct: 104 HVSSDSQTVYENVFAWNKVSNLLAIDGP-GAGFSWQQ 139
>U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical
protein F41C3.5 protein.
Length = 469
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +1
Query: 412 HAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLVAGKDG 591
++GFF V + N +++W+ ++ P++ W GGPG SSL GL E+GP VA +DG
Sbjct: 34 YSGFFQVSD--NHVLHYWFVESQNEPSNDPLIFWFNGGPGCSSLDGLLNEMGPYVANEDG 91
Query: 592 --FAKREHHWAKNYHLIFIDNPVGTGFSF 672
+ E+ W K +++I++P G G+S+
Sbjct: 92 KTLRENEYSWNKMASVVYIESPAGVGYSY 120
>Z49127-6|CAA88947.1| 454|Caenorhabditis elegans Hypothetical
protein F13D12.6 protein.
Length = 454
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Frame = +1
Query: 406 ESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLVAGK 585
+ ++G++ V K N +++W+ S PVLLWL GGPG S L L TE GP
Sbjct: 36 KQYSGYYNVGTKKNHMLHYWFVESQSNPSTDPVLLWLTGGPGCSGLSALLTEWGPWNVNT 95
Query: 586 DGFAKR--EHHWAKNYHLIFIDNPVGTGFSF 672
DG R + W KN ++ ++ P G G+S+
Sbjct: 96 DGATLRTNPYSWNKNASILTLEAPAGVGYSY 126
>AL021474-4|CAD54164.1| 445|Caenorhabditis elegans Hypothetical
protein Y32F6A.5 protein.
Length = 445
Score = 68.1 bits (159), Expect = 5e-12
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +1
Query: 430 VDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSL-FGLFTEVGP-LVAGKDGFAKR 603
VD + N++ ++W + N P+ LWLQGGPG+SS FG F E GP + G D A
Sbjct: 37 VDIRTNAHTFWWLYAAKPANSQRPLFLWLQGGPGSSSSGFGNFEETGPKTLNGSDNPAT- 95
Query: 604 EHHWAKNYHLIFIDNPVGTGFSF 672
W + ++++DNPVG GFS+
Sbjct: 96 ---WLQVADMVYVDNPVGAGFSY 115
>U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical
protein F32A5.3 protein.
Length = 574
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +1
Query: 406 ESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLVAGK 585
+S++G+ + M++ S + P+L+W GGPG SSL GLF E+GP
Sbjct: 37 KSYSGYVDANANGTWKMHYMLTESRSNPDTDPLLVWFNGGPGCSSLGGLFEELGPFYVNF 96
Query: 586 DG--FAKREHHWAKNYHLIFIDNPVGTGFSF 672
DG + + W +++++++P+G G+S+
Sbjct: 97 DGQTLYENPYAWNAKANVLYLESPIGVGYSY 127
>Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical
protein C08H9.1 protein.
Length = 505
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Frame = +1
Query: 403 IESHAGFFTVDEKFNSNMYFWYFPP--LSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLV 576
++ +G+ +E M+++ + EA+ +++W GGPG SSL F E GPL
Sbjct: 35 LKLQSGYLNANENGTQKMFYFLLEARDIPVGEAS-LIIWFNGGPGCSSLSAFFEEFGPLY 93
Query: 577 A--GKDGFAKREHHWAKNYHLIFIDNPVGTGFSF 672
G + H W +++F+++P+G GFS+
Sbjct: 94 VNFGGKSLFENVHSWYHKANILFLESPIGVGFSY 127
>U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical
protein K10B2.2a protein.
Length = 470
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +1
Query: 454 MYFWYFPPLSKNEAAPVLLWLQGGPGASSLFGLFTEVGPLVAGKDG--FAKREHHWAKNY 627
+++W P++LWL GGPG SSL GL E+GP G E+ W K
Sbjct: 53 LHYWLTESSRAPTQDPLVLWLNGGPGCSSLDGLIEELGPFHVKDFGNSIYYNEYAWNKFA 112
Query: 628 HLIFIDNPVGTGFSF 672
+++F+++P G G+S+
Sbjct: 113 NVLFLESPAGVGYSY 127
>AC024831-8|AAK72079.3| 362|Caenorhabditis elegans Serpentine
receptor, class t protein24 protein.
Length = 362
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 412 HAGFFTVDEKFNSNMYFWYFPPLSKN 489
+A FFT FNSN W+F PL N
Sbjct: 177 YAIFFTKTASFNSNYISWFFNPLLPN 202
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 404 IPSVSVNDTLDSSWARAMDSFLRNGVSMRGSPAESLGRASS 282
+P+VS D+L ++A F +NG + +P ES +ASS
Sbjct: 408 MPTVSGADSLPGPSSQAPQQFRQNGPAATAAPVESQPQASS 448
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 404 IPSVSVNDTLDSSWARAMDSFLRNGVSMRGSPAESLGRASS 282
+P+VS D+L ++A F +NG + +P ES +ASS
Sbjct: 605 MPTVSGADSLPGPSSQAPQQFRQNGPAATAAPVESQPQASS 645
>Z36753-11|CAE17918.1| 68|Caenorhabditis elegans Hypothetical
protein T09A5.14 protein.
Length = 68
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 267 NIRKFSAVQREQSRKKQNTRHCAQQRLPFHSHH 169
+IR F +++ R + + +QRLP H HH
Sbjct: 21 DIRDFEVIRQNAVRNIASLENILEQRLPSHRHH 53
>AC024831-6|AAY86308.1| 351|Caenorhabditis elegans Hypothetical
protein Y55F3C.10 protein.
Length = 351
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 421 FFTVDEKFNSNMYFWYFPPLSKNEAAP 501
FFT FNSN W+F P+ AP
Sbjct: 171 FFTKPLLFNSNYMSWFFNPMIPGNEAP 197
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +1
Query: 334 FLKNESIALAQELSRVSLTETLGIESHAGF--FTVDEKFNSNMYFWYFPPLSKNEAAPVL 507
F NESI L + L + + ++ G H G + + + S Y W P L + +
Sbjct: 210 FAPNESIVLYETLQALEMAKSSGKIRHIGLTGYPLGKLVYSFRYVWNAPKLYFSVNLSIT 269
Query: 508 LWLQGGPGASSLFGLFTEVGP 570
+ + +GL TE GP
Sbjct: 270 RNIAVINSGALCWGLLTEKGP 290
>AF067950-6|AAG24156.2| 372|Caenorhabditis elegans Serpentine
receptor, class w protein122 protein.
Length = 372
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 434 TRSSIQICTFGISRLYRRTKLHRFCCGC 517
T + + +C F +S YR T +H F CGC
Sbjct: 322 TCTHLFVCLF-MSSQYRSTTIHVFTCGC 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,819,632
Number of Sequences: 27780
Number of extensions: 339110
Number of successful extensions: 1069
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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