Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc18m06
(605 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 24 1.3
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 24 1.3
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 24 1.3
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 3.1
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 4.1
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 4.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.1
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 7.1
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 9.4
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 177 FKDPSE-SKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 290
F+D E S N NT+ F++ + L+ + H+K V
Sbjct: 61 FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 177 FKDPSE-SKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 290
F+D E S N NT+ F++ + L+ + H+K V
Sbjct: 61 FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 177 FKDPSE-SKKNMNTINFQTFVNSFQNRLEPPVRQHLKNV 290
F+D E S N NT+ F++ + L+ + H+K V
Sbjct: 61 FEDSDEGSNWNWNTLLRPNFLDGWYQTLQSAISAHMKKV 99
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.6 bits (46), Expect = 3.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -1
Query: 269 NWWFQSILKAVDKGLKI 219
NW Q ++K+++KG ++
Sbjct: 841 NWSNQDVIKSIEKGYRL 857
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 562 VVPSRAVIMIDGSTTLTYSSR 500
V+ +R V+ DGS T YSS+
Sbjct: 574 VLYNRLVVSEDGSETFKYSSQ 594
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 562 VVPSRAVIMIDGSTTLTYSSR 500
V+ +R V+ DGS T YSS+
Sbjct: 574 VLYNRLVVSEDGSETFKYSSQ 594
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 547 AVIMIDGSTTLTYSSRGPMLMPDVNPNP 464
A I++ T Y++ P L +NPNP
Sbjct: 198 APILVRARETPNYTACPPTLACPLNPNP 225
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 513 VSVVDPSIIITALLGTTLVF 572
V ++ P+ ++ LLG L+F
Sbjct: 294 VEIIPPTSLVVPLLGKYLIF 313
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 513 VSVVDPSIIITALLGTTLVF 572
V ++ P+ ++ LLG L+F
Sbjct: 294 VEIIPPTSLVVPLLGKYLIF 313
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 502 RGPMLMPDVNPN 467
RGPM D NPN
Sbjct: 856 RGPMTNDDFNPN 867
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/22 (27%), Positives = 15/22 (68%)
Frame = -2
Query: 574 TNTRVVPSRAVIMIDGSTTLTY 509
TNT + P+ +++ + +TT+ +
Sbjct: 326 TNTELNPNTFILVAENNTTMVF 347
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,677
Number of Sequences: 438
Number of extensions: 3557
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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